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The map label for this gene is kaiC [H]

Identifier: 66045687

GI number: 66045687

Start: 2839071

End: 2840555

Strand: Reverse

Name: kaiC [H]

Synonym: Psyr_2451

Alternate gene names: 66045687

Gene position: 2840555-2839071 (Counterclockwise)

Preceding gene: 66045690

Following gene: 66045686

Centisome position: 46.61

GC content: 58.65

Gene sequence:

>1485_bases
TTGAATACGTCAAAAGCGGCAACCGGCATTGAGGGCCTGGACGACATCCTTGCAGGGGGTCTTTCACGCAGTCATGTGTT
TCTTCTCGAGGGAGAACCCGGAACCGGCAAGACAACCGTGGCCCTGCAATTTCTGCAGGCCGGAGCGGCAGCGGGCGAAA
TATCCCTTTACATCACCCTGTCCGAGACTGAAAGCGAGTTGCGCTCGGGTGCCGCCTCGCACGGCTGGGAACTCGACGAA
CATATCAATATCTTCGAACTGACGCCGCCCGAAAGCCTGCTCGATGCCGATCATCACCAGAGTCTGCTCTACTCCTCGGA
CCTGGAGCTGGGTGAGGCGACGCGGCAGATATTCGAGGTGGTCGAGCGCGTCAAACCCACTCGCGTGGTGATCGACAGCC
TCTCGGAAATCCGTCTTCTGGCGCAGAGTTCGCTGCGTTACAGACGGCAGATTCTGGCTATCAAGCATTATTTCACCCGC
TACAACGCGACGGTGCTGCTGCTTGATGACCTGACCACCGAGGCGCTGGACAAGACTGTGCACAGTGTCGCCCACGGCGT
TATTCGCCTTGAGGCACTGACACCTACTTACGGTGCCGAGCGCAGGCGCCTGAAAATCGTCAAGTATCGTGGCCAGAAGT
ACCGCGGCGGTTTTCACGACTTCACCATTGCCGAGAACGGTATTCACGTCTTTCCACGCCTGGTGGCGGCGGAACACCGC
TCCAACTACTCGCGCTCCCAATTGAGCAGCGGCATCCCGGAATTGGACAATCTGCTGGGCGGCGGCATCGAAGGCGGCTC
CAGCACCTTGATTCTCGGCCCGGCCGGGACCGGGAAATCGCTCATCTCGCTGGTTTTCGCCGTGCAGGCGGTCGCACGCG
GCGAGCGTGTTGGCCTGTTCATATTCGATGAGGAAATGGGCCTGCTGTTTGAGCGCATGCTCAAACTGGGGATCGACCTG
CGTGCGCTGCAGGAAACCGGCAATCTGGTGATCGAACAGATCGACGCCGCAGAGTTGTCCCCTGGTGAATTTGCACACCG
CGTAAGACGCGCGGTGGATAAAAAGCAGATAAAGACCGTTGTCATCGACAGCATCAACGGCTATCAGGCTGCGATGCCGG
AAGAAAGCGCGCTGGTTCTGCACATGCACGAGCTGCTGCTCTACCTCAACCGCCAGGGCGCCTCGACCTTCATGACCGTT
GCGCAGCACGGACTGGTGGGCGATATGCGCTCGCCGGTGGACATTACCTACCTTGCCGACAGCGTGATTCTGTTGCGCTA
CTTCGAAGCATTGGGCCAGGTACGCCGAGCGATATCGATCATCAAGAAGCGTACCGGTACTCACGAGTCCACTATCCGCG
AGTACCGCATCAGTTCCAACGGATTGAAAATCGGCGAACCATTGCAGGCCTTTCAGGGCGTACTGCGCGGTGTGCCGTCG
TACATGGGCGACAAGAAACCGCTGCTTGAGGATGACGACCTTTGA

Upstream 100 bases:

>100_bases
TCGATATCGCTGTCCCCCTCAAATAGGGGGAACGGTCGCATCAGGCGAAGGTCCAGTAATCAGTAGCAACAAAACCTGTA
CGGTTATCAGAGGGCGATAC

Downstream 100 bases:

>100_bases
GTACTCCAGGCCTGTCGTCAGAGCGCGCGATCATTCTCGCCCCACGCGGGCGGGACAGTCAGATCGCTCTGCGCATTCTC
GACGAAGCGGGTTACCCGGC

Product: KaiC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MNTSKAATGIEGLDDILAGGLSRSHVFLLEGEPGTGKTTVALQFLQAGAAAGEISLYITLSETESELRSGAASHGWELDE
HINIFELTPPESLLDADHHQSLLYSSDLELGEATRQIFEVVERVKPTRVVIDSLSEIRLLAQSSLRYRRQILAIKHYFTR
YNATVLLLDDLTTEALDKTVHSVAHGVIRLEALTPTYGAERRRLKIVKYRGQKYRGGFHDFTIAENGIHVFPRLVAAEHR
SNYSRSQLSSGIPELDNLLGGGIEGGSSTLILGPAGTGKSLISLVFAVQAVARGERVGLFIFDEEMGLLFERMLKLGIDL
RALQETGNLVIEQIDAAELSPGEFAHRVRRAVDKKQIKTVVIDSINGYQAAMPEESALVLHMHELLLYLNRQGASTFMTV
AQHGLVGDMRSPVDITYLADSVILLRYFEALGQVRRAISIIKKRTGTHESTIREYRISSNGLKIGEPLQAFQGVLRGVPS
YMGDKKPLLEDDDL

Sequences:

>Translated_494_residues
MNTSKAATGIEGLDDILAGGLSRSHVFLLEGEPGTGKTTVALQFLQAGAAAGEISLYITLSETESELRSGAASHGWELDE
HINIFELTPPESLLDADHHQSLLYSSDLELGEATRQIFEVVERVKPTRVVIDSLSEIRLLAQSSLRYRRQILAIKHYFTR
YNATVLLLDDLTTEALDKTVHSVAHGVIRLEALTPTYGAERRRLKIVKYRGQKYRGGFHDFTIAENGIHVFPRLVAAEHR
SNYSRSQLSSGIPELDNLLGGGIEGGSSTLILGPAGTGKSLISLVFAVQAVARGERVGLFIFDEEMGLLFERMLKLGIDL
RALQETGNLVIEQIDAAELSPGEFAHRVRRAVDKKQIKTVVIDSINGYQAAMPEESALVLHMHELLLYLNRQGASTFMTV
AQHGLVGDMRSPVDITYLADSVILLRYFEALGQVRRAISIIKKRTGTHESTIREYRISSNGLKIGEPLQAFQGVLRGVPS
YMGDKKPLLEDDDL
>Mature_494_residues
MNTSKAATGIEGLDDILAGGLSRSHVFLLEGEPGTGKTTVALQFLQAGAAAGEISLYITLSETESELRSGAASHGWELDE
HINIFELTPPESLLDADHHQSLLYSSDLELGEATRQIFEVVERVKPTRVVIDSLSEIRLLAQSSLRYRRQILAIKHYFTR
YNATVLLLDDLTTEALDKTVHSVAHGVIRLEALTPTYGAERRRLKIVKYRGQKYRGGFHDFTIAENGIHVFPRLVAAEHR
SNYSRSQLSSGIPELDNLLGGGIEGGSSTLILGPAGTGKSLISLVFAVQAVARGERVGLFIFDEEMGLLFERMLKLGIDL
RALQETGNLVIEQIDAAELSPGEFAHRVRRAVDKKQIKTVVIDSINGYQAAMPEESALVLHMHELLLYLNRQGASTFMTV
AQHGLVGDMRSPVDITYLADSVILLRYFEALGQVRRAISIIKKRTGTHESTIREYRISSNGLKIGEPLQAFQGVLRGVPS
YMGDKKPLLEDDDL

Specific function: Core component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by actin

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 kaiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014774
- InterPro:   IPR013503
- InterPro:   IPR010624 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 54425; Mature: 54425

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS51146 KAIC ; PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSKAATGIEGLDDILAGGLSRSHVFLLEGEPGTGKTTVALQFLQAGAAAGEISLYITL
CCCCCHHCCCCHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEE
SETESELRSGAASHGWELDEHINIFELTPPESLLDADHHQSLLYSSDLELGEATRQIFEV
CCCHHHHHCCCCCCCCCCHHCCCEEEECCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHH
VERVKPTRVVIDSLSEIRLLAQSSLRYRRQILAIKHYFTRYNATVLLLDDLTTEALDKTV
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHH
HSVAHGVIRLEALTPTYGAERRRLKIVKYRGQKYRGGFHDFTIAENGIHVFPRLVAAEHR
HHHHHHHEEEEEECCCCCCCHHHEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHH
SNYSRSQLSSGIPELDNLLGGGIEGGSSTLILGPAGTGKSLISLVFAVQAVARGERVGLF
CCCCHHHHHCCCCHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE
IFDEEMGLLFERMLKLGIDLRALQETGNLVIEQIDAAELSPGEFAHRVRRAVDKKQIKTV
EEECHHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
VIDSINGYQAAMPEESALVLHMHELLLYLNRQGASTFMTVAQHGLVGDMRSPVDITYLAD
EEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEHHHH
SVILLRYFEALGQVRRAISIIKKRTGTHESTIREYRISSNGLKIGEPLQAFQGVLRGVPS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCHH
YMGDKKPLLEDDDL
HCCCCCCCCCCCCC
>Mature Secondary Structure
MNTSKAATGIEGLDDILAGGLSRSHVFLLEGEPGTGKTTVALQFLQAGAAAGEISLYITL
CCCCCHHCCCCHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEE
SETESELRSGAASHGWELDEHINIFELTPPESLLDADHHQSLLYSSDLELGEATRQIFEV
CCCHHHHHCCCCCCCCCCHHCCCEEEECCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHH
VERVKPTRVVIDSLSEIRLLAQSSLRYRRQILAIKHYFTRYNATVLLLDDLTTEALDKTV
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHH
HSVAHGVIRLEALTPTYGAERRRLKIVKYRGQKYRGGFHDFTIAENGIHVFPRLVAAEHR
HHHHHHHEEEEEECCCCCCCHHHEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHH
SNYSRSQLSSGIPELDNLLGGGIEGGSSTLILGPAGTGKSLISLVFAVQAVARGERVGLF
CCCCHHHHHCCCCHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE
IFDEEMGLLFERMLKLGIDLRALQETGNLVIEQIDAAELSPGEFAHRVRRAVDKKQIKTV
EEECHHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
VIDSINGYQAAMPEESALVLHMHELLLYLNRQGASTFMTVAQHGLVGDMRSPVDITYLAD
EEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEHHHH
SVILLRYFEALGQVRRAISIIKKRTGTHESTIREYRISSNGLKIGEPLQAFQGVLRGVPS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCHH
YMGDKKPLLEDDDL
HCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA