| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is rcsC [C]
Identifier: 66045680
GI number: 66045680
Start: 2829630
End: 2830001
Strand: Reverse
Name: rcsC [C]
Synonym: Psyr_2444
Alternate gene names: 66045680
Gene position: 2830001-2829630 (Counterclockwise)
Preceding gene: 66045686
Following gene: 66045679
Centisome position: 46.44
GC content: 55.11
Gene sequence:
>372_bases ATGCCCGACACAGCCCGCACCATTCTCGTGGTCGAAGACGACGCCATTGTGCGCATGCTGATTGTCGACGTGCTCGAAGA GCTGGAATACAAGGTACTGGAAGCCGAGGACGCTACGTCGGCACTCACCTTTGTTGCAGACGATTCCAATCACATCGACC TGTTGATGACTGACCAGGGGCTGCCTGACATGAAAGGCACTGCACTGGCCAAAAAGGTCATCGAACTTCGCCCGCAATTG CCGGTGCTGTTCGCCAGCGGTTACTCGGAAAATATCGACGTGCCGCCAGGCATGCACTCGATCGGCAAGCCGTTCTCCAT CGACCAGTTGCGTGACAAGGTAAAAAGCATTCTTGGAAACAGCCTTGACTGA
Upstream 100 bases:
>100_bases GGACAGGCCCTCGCTCGGTTACCCTGAGTCGACGGGAAAGGATGCGCGAAACTCCACACCGTCTGCGCTATCACCATTAT TCAGGTTTAAGGAGTCAACC
Downstream 100 bases:
>100_bases CATCGACGCTGCCTTCAACCGCACTGAAAAGCCTGTCAGCACCCGCTTATTGATCATTGGCTACGTATGGCCTGAGCCGC GATCTTCGGCCGCCAGCGGG
Product: response regulator receiver
Products: NA
Alternate protein names: Multi-Sensor Hybrid Histidine Kinase; Histidine Kinase; Sensory Box Histidine Kinase/Response Regulator; Sensory Box Sensor Histidine Kinase/Response Regulator; Two-Component Hybrid Sensor And Regulator; Integral Membrane Sensor Hybrid Histidine Kinase; Response Regulator Receiver Protein; PAS Sensor Protein; Sensor Histidine Kinase; Response Regulator; Histidine Kinase-Response Regulator Hybrid Protein; Sensory Transduction Protein Kinase; Sensor Protein; Two Component Sensor Kinase/Response Regulator Hybrid; Signal Transduction Histidine Kinase; Sensor Histidine Kinase/Response Regulator; Histidine Kinase/Response Regulator Hybrid Protein; Hybrid Sensor Histidine Kinase; Two-Component Sensor Histidine Kinase Protein; ATPase Domain-Containing Protein; Sensory Box Histidine Kinase/Response Regulator Hybrid; GAF Sensor Hybrid Histidine Kinase; Response Regulator Receiver Domain-Containing Protein; Signal Transduction Histidine Kinase And Receiver; Sensor Histidine Kinase/Response Regulator Fusion Protein; Two-Component Response Regulator; Pas/Pac Sensor Hybrid Histidine Kinase; Two-Component Sensor Histidine Kinase; Response Regulator Receiver; Sensor/Response Regulator Hybrid; PAS Fold Family; Sensor Kinase/Response Regulator Fusion Protein; Two-Component Hyrid Sensor And Regulator; Sensory Box; Cell Cycle Histidine Kinase CckA; Signal Receiver Domain Protein; Two-Component Hybrid Sensor And Regulator Protein; PAS/PAC Sensor Protein; Periplasmic Sensor Hybrid Histidine Kinase; Multi-Site Sensor Histidine Kinase; Hybrid Histidine Kinase; PAS-Family Sensor Histidine Kinase
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MPDTARTILVVEDDAIVRMLIVDVLEELEYKVLEAEDATSALTFVADDSNHIDLLMTDQGLPDMKGTALAKKVIELRPQL PVLFASGYSENIDVPPGMHSIGKPFSIDQLRDKVKSILGNSLD
Sequences:
>Translated_123_residues MPDTARTILVVEDDAIVRMLIVDVLEELEYKVLEAEDATSALTFVADDSNHIDLLMTDQGLPDMKGTALAKKVIELRPQL PVLFASGYSENIDVPPGMHSIGKPFSIDQLRDKVKSILGNSLD >Mature_122_residues PDTARTILVVEDDAIVRMLIVDVLEELEYKVLEAEDATSALTFVADDSNHIDLLMTDQGLPDMKGTALAKKVIELRPQLP VLFASGYSENIDVPPGMHSIGKPFSIDQLRDKVKSILGNSLD
Specific function: Member Of The Two-Component Regulatory System rcsC/rcsB Involved In The Regulation Of The Expression Of Genes Involved In Colanic Acid Capsule Synthesis. rcsC Probably Functions As A Membrane-Associated Protein Kinase That Phosphorylates rcsB In Response
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.3.- [C]
Molecular weight: Translated: 13494; Mature: 13362
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDTARTILVVEDDAIVRMLIVDVLEELEYKVLEAEDATSALTFVADDSNHIDLLMTDQG CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCC LPDMKGTALAKKVIELRPQLPVLFASGYSENIDVPPGMHSIGKPFSIDQLRDKVKSILGN CCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHCC SLD CCC >Mature Secondary Structure PDTARTILVVEDDAIVRMLIVDVLEELEYKVLEAEDATSALTFVADDSNHIDLLMTDQG CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCC LPDMKGTALAKKVIELRPQLPVLFASGYSENIDVPPGMHSIGKPFSIDQLRDKVKSILGN CCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHCC SLD CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Phosphotransferases with a nitrogenous group as acceptor [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA