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The map label for this gene is dgoA [H]

Identifier: 66045228

GI number: 66045228

Start: 2308408

End: 2309043

Strand: Direct

Name: dgoA [H]

Synonym: Psyr_1988

Alternate gene names: 66045228

Gene position: 2308408-2309043 (Clockwise)

Preceding gene: 66045227

Following gene: 66045229

Centisome position: 37.88

GC content: 63.36

Gene sequence:

>636_bases
ATGCTCAAGCAAGCATTGAAAGAAAATGGTCTGGTCGCGATTCTGCGCGGCTTGCGTCCCGAAGAAGCGCCTGCCATGGG
CGATGCGCTGTACGAAGCGGGTTTTCGGGTCATCGAAGTGCCGCTCAACTCTCCGCAACCGTTCGACAGCATCCGCCTGT
TGCGACAGCAGTTGCCTGCCGATTGCCTGATCGGTGCTGGCACTGTGCTCACCCCTGAGCAGGTGACTCAGGTCAAGGAC
GCCGGCGGGCAAGTGATCGTCATGCCGCACAGCGACGCCAAGGTGCTGCGTGCGGCCAAGGCGGCCGGGCTATTCCTGTC
GCCAGGCGTCGCGACGCCGACCGAAGCCTTTGCGGCACTGGCCGAAGGCGCCGATGTGCTCAAGCTGTTTCCTGCCGAGC
AGATGTCGCCGGCGGTGGTCAAGGCGTGGCTGGCGGTCTTGCCCAAGGGCACGATTCTGCTGCCGGTCGGTGGTATCTCG
CCGGACAACATGAAGGTATTTCTCGACGCCGGTGTGAAGGGGTTTGGTCTGGGCTCCGGGCTGTTCAAACCTGGCATGAG
CGTCGCAGACGTCACCGAGCGTGCCCAGGCCTATGTGGCGGCCTGGAAGCAGCACAGCGCAGCGCTTGCAGACTGA

Upstream 100 bases:

>100_bases
ACATTGGCCGAGCAGGCGACCGAGCGCGGCCTCTGGCAGGTCGCCGTGCAGGCTGGCCTGATCGCGCGCCGCTCGTCCCA
ACACATTCGAGAGGTTTGAC

Downstream 100 bases:

>100_bases
CCGGCGCAGCAGATGCCGCCGTGCAGTAGCCGCTATCCAATAAGAGAATCAACAAGAGAAACCGCACCCATGAAAATCAC
CAAACTCACCACGTTCATCG

Product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MLKQALKENGLVAILRGLRPEEAPAMGDALYEAGFRVIEVPLNSPQPFDSIRLLRQQLPADCLIGAGTVLTPEQVTQVKD
AGGQVIVMPHSDAKVLRAAKAAGLFLSPGVATPTEAFAALAEGADVLKLFPAEQMSPAVVKAWLAVLPKGTILLPVGGIS
PDNMKVFLDAGVKGFGLGSGLFKPGMSVADVTERAQAYVAAWKQHSAALAD

Sequences:

>Translated_211_residues
MLKQALKENGLVAILRGLRPEEAPAMGDALYEAGFRVIEVPLNSPQPFDSIRLLRQQLPADCLIGAGTVLTPEQVTQVKD
AGGQVIVMPHSDAKVLRAAKAAGLFLSPGVATPTEAFAALAEGADVLKLFPAEQMSPAVVKAWLAVLPKGTILLPVGGIS
PDNMKVFLDAGVKGFGLGSGLFKPGMSVADVTERAQAYVAAWKQHSAALAD
>Mature_211_residues
MLKQALKENGLVAILRGLRPEEAPAMGDALYEAGFRVIEVPLNSPQPFDSIRLLRQQLPADCLIGAGTVLTPEQVTQVKD
AGGQVIVMPHSDAKVLRAAKAAGLFLSPGVATPTEAFAALAEGADVLKLFPAEQMSPAVVKAWLAVLPKGTILLPVGGIS
PDNMKVFLDAGVKGFGLGSGLFKPGMSVADVTERAQAYVAAWKQHSAALAD

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=194, Percent_Identity=45.360824742268, Blast_Score=163, Evalue=7e-42,
Organism=Escherichia coli, GI1788156, Length=150, Percent_Identity=36.6666666666667, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 22005; Mature: 22005

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKQALKENGLVAILRGLRPEEAPAMGDALYEAGFRVIEVPLNSPQPFDSIRLLRQQLPA
CCHHHHHHCCCEEEHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCH
DCLIGAGTVLTPEQVTQVKDAGGQVIVMPHSDAKVLRAAKAAGLFLSPGVATPTEAFAAL
HHEECCCCEECHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCEEECCCCCCHHHHHHHH
AEGADVLKLFPAEQMSPAVVKAWLAVLPKGTILLPVGGISPDNMKVFLDAGVKGFGLGSG
HCCCHHEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCC
LFKPGMSVADVTERAQAYVAAWKQHSAALAD
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLKQALKENGLVAILRGLRPEEAPAMGDALYEAGFRVIEVPLNSPQPFDSIRLLRQQLPA
CCHHHHHHCCCEEEHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCH
DCLIGAGTVLTPEQVTQVKDAGGQVIVMPHSDAKVLRAAKAAGLFLSPGVATPTEAFAAL
HHEECCCCEECHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCEEECCCCCCHHHHHHHH
AEGADVLKLFPAEQMSPAVVKAWLAVLPKGTILLPVGGISPDNMKVFLDAGVKGFGLGSG
HCCCHHEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCC
LFKPGMSVADVTERAQAYVAAWKQHSAALAD
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]