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The map label for this gene is dgoK [H]

Identifier: 66045227

GI number: 66045227

Start: 2307402

End: 2308406

Strand: Direct

Name: dgoK [H]

Synonym: Psyr_1987

Alternate gene names: 66045227

Gene position: 2307402-2308406 (Clockwise)

Preceding gene: 66045226

Following gene: 66045228

Centisome position: 37.87

GC content: 64.98

Gene sequence:

>1005_bases
ATGCAGGCGCAATTGATCGCGCTCGATTGGGGGACAACCTCACTTCGTGCTTATCGACTTGGCGAACATGGCCAGGTACT
GGAACAGCGCGCGTTGAGCGCGGGCATCATGCAGTTGCCAACCACGCCGCGGCTGATCGCGGGGCAGTTCTGCAGTGACG
GTTTCGAACTGGCCTTCGACCAGGCGTGCGGCGACTGGCTCGATGCCCAGCCGGATCTGCAGGTGATTGCCTGCGGCATG
GTCGGCAGCGCGCAGGGCTGGCGCGAGGCGGCTTATCGGGAAACGCCGGCCAGCGTCAACGAGCTGAGCGCAGCGTTGCA
GACGGTACGCAGCGTGCGCGGCGTGACGGTGCACATCATCCCCGGCGTCCTGCAGCGCTCGACCCTGCCCAACGTCATGC
GTGGCGAAGAAACCCAGGTGCTGGGTGTGCTGGCAGGGCTCGAAGACGGGCAGGGCAGCCAGCCGCTGCTGATCGGTCTG
CCGGGCAGCCACTCCAAATGGGTGCAGGTAGAGCGCGGTCGCATCGTTCACTTCGATACCTTCATGACCGGTGAGGTTTA
CGCCGCGCTCTGCGCCCACACCATTCTCGGGCGCACCATGCAGCCTGCCGAGGCGTTCGATGAGCAGGCCTTTGACCGCG
GCTTGTCGATTGCCCTGTCCGACGCGGGCTCCGCCGGGCCACTGTCGACTATTTTCAGCACGCGAACGCTCGGCCTGACC
GGGCAATTGAGTGCCAGCGCGCAACCTGACTATCTTTCCGGCCTGTTGATTGGCCATGAACTGGGCGCCATCGCCAGGCT
GCATCTGCACAACCACGAACAATTGCCTGCGGTGATCCTCATCGGCAGCGATTCGCTGTGCACGCGCTATGCACGCGGGC
TGGCCGTTTGTGGCTTTCCCGGGGTGACATTGGCCGAGCAGGCGACCGAGCGCGGCCTCTGGCAGGTCGCCGTGCAGGCT
GGCCTGATCGCGCGCCGCTCGTCCCAACACATTCGAGAGGTTTGA

Upstream 100 bases:

>100_bases
TGTCCCTATATATGGGATTGAAATTTACATATTGAGATAAGTGTAACAACGGGTTTATAGTCGTCCTGCACTCACTTCCA
AAAAAACAACAGGTGACGCA

Downstream 100 bases:

>100_bases
CATGCTCAAGCAAGCATTGAAAGAAAATGGTCTGGTCGCGATTCTGCGCGGCTTGCGTCCCGAAGAAGCGCCTGCCATGG
GCGATGCGCTGTACGAAGCG

Product: 2-keto-3-deoxy-galactonokinase

Products: NA

Alternate protein names: 2-keto-3-deoxy-galactonokinase; 2-oxo-3-deoxygalactonate kinase [H]

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MQAQLIALDWGTTSLRAYRLGEHGQVLEQRALSAGIMQLPTTPRLIAGQFCSDGFELAFDQACGDWLDAQPDLQVIACGM
VGSAQGWREAAYRETPASVNELSAALQTVRSVRGVTVHIIPGVLQRSTLPNVMRGEETQVLGVLAGLEDGQGSQPLLIGL
PGSHSKWVQVERGRIVHFDTFMTGEVYAALCAHTILGRTMQPAEAFDEQAFDRGLSIALSDAGSAGPLSTIFSTRTLGLT
GQLSASAQPDYLSGLLIGHELGAIARLHLHNHEQLPAVILIGSDSLCTRYARGLAVCGFPGVTLAEQATERGLWQVAVQA
GLIARRSSQHIREV

Sequences:

>Translated_334_residues
MQAQLIALDWGTTSLRAYRLGEHGQVLEQRALSAGIMQLPTTPRLIAGQFCSDGFELAFDQACGDWLDAQPDLQVIACGM
VGSAQGWREAAYRETPASVNELSAALQTVRSVRGVTVHIIPGVLQRSTLPNVMRGEETQVLGVLAGLEDGQGSQPLLIGL
PGSHSKWVQVERGRIVHFDTFMTGEVYAALCAHTILGRTMQPAEAFDEQAFDRGLSIALSDAGSAGPLSTIFSTRTLGLT
GQLSASAQPDYLSGLLIGHELGAIARLHLHNHEQLPAVILIGSDSLCTRYARGLAVCGFPGVTLAEQATERGLWQVAVQA
GLIARRSSQHIREV
>Mature_334_residues
MQAQLIALDWGTTSLRAYRLGEHGQVLEQRALSAGIMQLPTTPRLIAGQFCSDGFELAFDQACGDWLDAQPDLQVIACGM
VGSAQGWREAAYRETPASVNELSAALQTVRSVRGVTVHIIPGVLQRSTLPNVMRGEETQVLGVLAGLEDGQGSQPLLIGL
PGSHSKWVQVERGRIVHFDTFMTGEVYAALCAHTILGRTMQPAEAFDEQAFDRGLSIALSDAGSAGPLSTIFSTRTLGLT
GQLSASAQPDYLSGLLIGHELGAIARLHLHNHEQLPAVILIGSDSLCTRYARGLAVCGFPGVTLAEQATERGLWQVAVQA
GLIARRSSQHIREV

Specific function: D-galactonate degradation; second step. [C]

COG id: COG3734

COG function: function code G; 2-keto-3-deoxy-galactonokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790128, Length=301, Percent_Identity=32.890365448505, Blast_Score=121, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007729 [H]

Pfam domain/function: PF05035 DGOK [H]

EC number: =2.7.1.58 [H]

Molecular weight: Translated: 35697; Mature: 35697

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAQLIALDWGTTSLRAYRLGEHGQVLEQRALSAGIMQLPTTPRLIAGQFCSDGFELAFD
CCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHCHHCCCCCCHHHHHHHCCCCHHHHHH
QACGDWLDAQPDLQVIACGMVGSAQGWREAAYRETPASVNELSAALQTVRSVRGVTVHII
HHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEE
PGVLQRSTLPNVMRGEETQVLGVLAGLEDGQGSQPLLIGLPGSHSKWVQVERGRIVHFDT
CCHHHHCCCCHHHCCCCHHEEEEEECCCCCCCCCCEEEECCCCCCCEEEEECCCEEEEEC
FMTGEVYAALCAHTILGRTMQPAEAFDEQAFDRGLSIALSDAGSAGPLSTIFSTRTLGLT
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHEECCE
GQLSASAQPDYLSGLLIGHELGAIARLHLHNHEQLPAVILIGSDSLCTRYARGLAVCGFP
ECCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEECCCHHHHHHHCCEEEECCC
GVTLAEQATERGLWQVAVQAGLIARRSSQHIREV
CCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHCC
>Mature Secondary Structure
MQAQLIALDWGTTSLRAYRLGEHGQVLEQRALSAGIMQLPTTPRLIAGQFCSDGFELAFD
CCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHCHHCCCCCCHHHHHHHCCCCHHHHHH
QACGDWLDAQPDLQVIACGMVGSAQGWREAAYRETPASVNELSAALQTVRSVRGVTVHII
HHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEE
PGVLQRSTLPNVMRGEETQVLGVLAGLEDGQGSQPLLIGLPGSHSKWVQVERGRIVHFDT
CCHHHHCCCCHHHCCCCHHEEEEEECCCCCCCCCCEEEECCCCCCCEEEEECCCEEEEEC
FMTGEVYAALCAHTILGRTMQPAEAFDEQAFDRGLSIALSDAGSAGPLSTIFSTRTLGLT
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHEECCE
GQLSASAQPDYLSGLLIGHELGAIARLHLHNHEQLPAVILIGSDSLCTRYARGLAVCGFP
ECCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEECCCHHHHHHHCCEEEECCC
GVTLAEQATERGLWQVAVQAGLIARRSSQHIREV
CCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]