Click here to switch to the map view.

The map label for this gene is pvdQ [H]

Identifier: 66045211

GI number: 66045211

Start: 2285834

End: 2288173

Strand: Direct

Name: pvdQ [H]

Synonym: Psyr_1971

Alternate gene names: 66045211

Gene position: 2285834-2288173 (Clockwise)

Preceding gene: 66045207

Following gene: 66045214

Centisome position: 37.51

GC content: 61.71

Gene sequence:

>2340_bases
GTGATTATTTCCAGACCCCTGTGCAGTTTTGTGTTTGCAGGTCTTTCATTCGCTGTGATTTTGCCTGCGCAGGCCTTGGT
TGAACCTGGAAATCAGGCGGCCAGGGCCGAGATCCGGCGGACCGGTTTTGGCGTGCCGCACATCGTTGCCGCCAATGAGC
GCGGTCTGGGCTACGGCATCGGTTATGCCTACGCGCAGGACAACCTGTGCCTGCTGGCCAATGAGGTGGTCACCGTCAAT
GGCCAGCGCTCGCGCTATTTCGGCCCGGACAAGGCGACCCTTGAGCAGCGCAACAACATGGCCAGCGACCTGCTGTTCCA
GTGGCTCAATACGCCGCAGGCACTGGCGGATTTCTGGAATGCGCAGCCGCGGGAGATTCGCCAGTTGATGCAGGGTTATG
TCGCCGGTTACAACCGTTCGCTGGCCGAGCAGACCACCCAAGGCCTGCCGCAACCCTGTGCGGCCGAGTGGGTTCGACCG
ATCAGCACCGATGATCTGCTGCGTTTGACCCGCCGCCTGCTGGTCGAGGGGGGCGTTGGGCAGTTTGCCGAAGCGCTGGC
CGGTGCCACGCCGCCTGCACAGCAAAAACCACTGCAGGTCGATGCTCAGCAGGCTCAGGCGCTGCAACTGGCCGCTGCGC
GTAACCAGCGTTTTGCTCTGGAACGCGGCAGCAATGCCGTGGCAATAGGACGCGAGCTGTCCGCCAACGGACGCGGCATG
CTGTTGGCCAATCCGCATTTCCCATGGGGCGGCGGCATGCGTTTCTATCAAATGCACCTGACCATTCCCGGCAAACTCGA
CGTGATGGGCGCAGCGCTGCCGGGCCTGCCGCTGATCAACATCGGCTTCAATCAGCATCTGGCCTGGAGCCATACCGTCG
ACACGTCGAAACACTTCACGCTGCATCGCCTGCAGCTCGACCCGAAGGATTCCACCCGTTACCTGCTGGATGGCCAATCG
GTTGCCATGGGCAAGCAGCAGGTGAGTGTCGACGTGAAGCAAGCGGATGGCAGCCTGAAGTCGGTGCCACGCATCGTCTA
TTCGTCCATATTCGGTCCGGTGGTGCAATGGCCGGGCAAGCTGGACTGGGATAGTAAGTTTGCCTTCAGTCTGCGTGATG
CCAACCTGCAAAATGATCGGGTGTTGCAGCAGTGGTATGCGATGGACAAGGCCGACAGCCTCAAGGCGTTTCAGGATTCG
GTACGTAAGATCCAGGGCATCCCGTGGGTCAACACCCTGGCGGTGGATGCCCAGGGGCAGGCGCTGTACATGAACCTCTC
GGTGGTGCCGAACGTTGATGCCGCCAGGCTTGCCAGGTGCAGTGATCCGCGCATCGGCACAGAGCTGATCGTGCTCGACG
GCTCGCGCAGTGAATGCAACTGGGAGGTCTCCGCAGAGGCAGCACAAGCCGGCATCTATCCGTCCTCGCGCCAGCCGCAG
TTGCTGCGGACCGATTTCGTGCAGCATTCCAACGATTCGGCGTGGATGGTCAATCCCGCTGCGCCGCTGCAGGGCTTTTC
GCCGCTGATCAGCCAGGACGGCCAGCCGCTCGGCCAACGTGCACGTTTTGCGCTGGATCGGCTGGAGAGCCTGAAGACGG
CGGGCAAGATCAGCGTCGAGAACCTGCAAGCGATGGTCATGGACAACGAGGTCTATCAGGCCGGGCAAGTGCTGCCGGAT
CTGCTCACATTCTGCGCCTCGGAGCTGGGTGACGACGCTGCCCGTCTGGCACCGTTGTGCGCTGCACTGAAAGACTGGGA
CGGGCGCGCTGACCTGAACAGTGGCATCGGCTTCGTGTACTTCCAGAAGATCATGACGTCCATGCAAGCTGTTGCCTCAC
GCTGGCGCGTCGCGTTCGACCCGCAGGACCCGGTTCACACGCCGAGCGGGCTGGCGATTGAAAACCCGTCTGTTGCCACC
GCACTGCGCGCGGCCATGCTCGCAGCGGTCGATGACGTGGCCAAGGCAGGCCTCCCGGCAGGCAGTAAATGGGGCGACAT
TCAGGTCTCCAGCATCAGCGGCAAGCAGATCCCGATTCACGGCGGTCCGGCCGGGCTCGGCGTCTACAACGCCATGCAAA
CGGTGGCGGGCAAGGACGGCAAGCGCGAGGTGGTCAGTGGCACCAGCTACCTGCAGGTGGTGACGTTCGACGAGCAGGGC
CCCAAGGCGCAGGGTTTACTGGCGTTCTCGGAATCGAGCAATCCACAGTCAGCCCATTCAAGTGACCAGACTGAAGCATT
TTCAAAAAAACAATGGCAGGCGTTGCCGTTCACTGAACAGCAGATCAAGGCTGATCCTGCGTATGAGGTGCAGGTGATAA
GCGAGGAGCCTGATCGCTGA

Upstream 100 bases:

>100_bases
AGCGTCGATCACGGGTTGTCCGGTTCGGCTAAACATCAGCGTCCGTGTTCCGTTTAACGAGAGCGGCTAATTCGGGTCGT
CTTGTCGAGTTGGAGTCAGC

Downstream 100 bases:

>100_bases
AAGAGGCAAGAAAAGCGTTTGGGCCATGCGGCCCAAATGCGCTTATCGGCAATCAGCCGCCGGGTGTATCGATATCAGCG
TCAACACCCGTGGTTGGCTG

Product: peptidase S45, penicillin amidase

Products: NA

Alternate protein names: AHL acylase pvdQ; Acyl-HSL acylase pvdQ; Acyl-HSL acylase pvdQ subunit alpha; Acyl-HSL acylase pvdQ subunit beta [H]

Number of amino acids: Translated: 779; Mature: 779

Protein sequence:

>779_residues
MIISRPLCSFVFAGLSFAVILPAQALVEPGNQAARAEIRRTGFGVPHIVAANERGLGYGIGYAYAQDNLCLLANEVVTVN
GQRSRYFGPDKATLEQRNNMASDLLFQWLNTPQALADFWNAQPREIRQLMQGYVAGYNRSLAEQTTQGLPQPCAAEWVRP
ISTDDLLRLTRRLLVEGGVGQFAEALAGATPPAQQKPLQVDAQQAQALQLAAARNQRFALERGSNAVAIGRELSANGRGM
LLANPHFPWGGGMRFYQMHLTIPGKLDVMGAALPGLPLINIGFNQHLAWSHTVDTSKHFTLHRLQLDPKDSTRYLLDGQS
VAMGKQQVSVDVKQADGSLKSVPRIVYSSIFGPVVQWPGKLDWDSKFAFSLRDANLQNDRVLQQWYAMDKADSLKAFQDS
VRKIQGIPWVNTLAVDAQGQALYMNLSVVPNVDAARLARCSDPRIGTELIVLDGSRSECNWEVSAEAAQAGIYPSSRQPQ
LLRTDFVQHSNDSAWMVNPAAPLQGFSPLISQDGQPLGQRARFALDRLESLKTAGKISVENLQAMVMDNEVYQAGQVLPD
LLTFCASELGDDAARLAPLCAALKDWDGRADLNSGIGFVYFQKIMTSMQAVASRWRVAFDPQDPVHTPSGLAIENPSVAT
ALRAAMLAAVDDVAKAGLPAGSKWGDIQVSSISGKQIPIHGGPAGLGVYNAMQTVAGKDGKREVVSGTSYLQVVTFDEQG
PKAQGLLAFSESSNPQSAHSSDQTEAFSKKQWQALPFTEQQIKADPAYEVQVISEEPDR

Sequences:

>Translated_779_residues
MIISRPLCSFVFAGLSFAVILPAQALVEPGNQAARAEIRRTGFGVPHIVAANERGLGYGIGYAYAQDNLCLLANEVVTVN
GQRSRYFGPDKATLEQRNNMASDLLFQWLNTPQALADFWNAQPREIRQLMQGYVAGYNRSLAEQTTQGLPQPCAAEWVRP
ISTDDLLRLTRRLLVEGGVGQFAEALAGATPPAQQKPLQVDAQQAQALQLAAARNQRFALERGSNAVAIGRELSANGRGM
LLANPHFPWGGGMRFYQMHLTIPGKLDVMGAALPGLPLINIGFNQHLAWSHTVDTSKHFTLHRLQLDPKDSTRYLLDGQS
VAMGKQQVSVDVKQADGSLKSVPRIVYSSIFGPVVQWPGKLDWDSKFAFSLRDANLQNDRVLQQWYAMDKADSLKAFQDS
VRKIQGIPWVNTLAVDAQGQALYMNLSVVPNVDAARLARCSDPRIGTELIVLDGSRSECNWEVSAEAAQAGIYPSSRQPQ
LLRTDFVQHSNDSAWMVNPAAPLQGFSPLISQDGQPLGQRARFALDRLESLKTAGKISVENLQAMVMDNEVYQAGQVLPD
LLTFCASELGDDAARLAPLCAALKDWDGRADLNSGIGFVYFQKIMTSMQAVASRWRVAFDPQDPVHTPSGLAIENPSVAT
ALRAAMLAAVDDVAKAGLPAGSKWGDIQVSSISGKQIPIHGGPAGLGVYNAMQTVAGKDGKREVVSGTSYLQVVTFDEQG
PKAQGLLAFSESSNPQSAHSSDQTEAFSKKQWQALPFTEQQIKADPAYEVQVISEEPDR
>Mature_779_residues
MIISRPLCSFVFAGLSFAVILPAQALVEPGNQAARAEIRRTGFGVPHIVAANERGLGYGIGYAYAQDNLCLLANEVVTVN
GQRSRYFGPDKATLEQRNNMASDLLFQWLNTPQALADFWNAQPREIRQLMQGYVAGYNRSLAEQTTQGLPQPCAAEWVRP
ISTDDLLRLTRRLLVEGGVGQFAEALAGATPPAQQKPLQVDAQQAQALQLAAARNQRFALERGSNAVAIGRELSANGRGM
LLANPHFPWGGGMRFYQMHLTIPGKLDVMGAALPGLPLINIGFNQHLAWSHTVDTSKHFTLHRLQLDPKDSTRYLLDGQS
VAMGKQQVSVDVKQADGSLKSVPRIVYSSIFGPVVQWPGKLDWDSKFAFSLRDANLQNDRVLQQWYAMDKADSLKAFQDS
VRKIQGIPWVNTLAVDAQGQALYMNLSVVPNVDAARLARCSDPRIGTELIVLDGSRSECNWEVSAEAAQAGIYPSSRQPQ
LLRTDFVQHSNDSAWMVNPAAPLQGFSPLISQDGQPLGQRARFALDRLESLKTAGKISVENLQAMVMDNEVYQAGQVLPD
LLTFCASELGDDAARLAPLCAALKDWDGRADLNSGIGFVYFQKIMTSMQAVASRWRVAFDPQDPVHTPSGLAIENPSVAT
ALRAAMLAAVDDVAKAGLPAGSKWGDIQVSSISGKQIPIHGGPAGLGVYNAMQTVAGKDGKREVVSGTSYLQVVTFDEQG
PKAQGLLAFSESSNPQSAHSSDQTEAFSKKQWQALPFTEQQIKADPAYEVQVISEEPDR

Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of 11 to 14 carbons in length) [H

COG id: COG2366

COG function: function code R; Protein related to penicillin acylase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S45 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002692 [H]

Pfam domain/function: PF01804 Penicil_amidase [H]

EC number: =3.5.1.97 [H]

Molecular weight: Translated: 84674; Mature: 84674

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISRPLCSFVFAGLSFAVILPAQALVEPGNQAARAEIRRTGFGVPHIVAANERGLGYGI
CCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEC
GYAYAQDNLCLLANEVVTVNGQRSRYFGPDKATLEQRNNMASDLLFQWLNTPQALADFWN
EEEEECCCEEEEECCEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHC
AQPREIRQLMQGYVAGYNRSLAEQTTQGLPQPCAAEWVRPISTDDLLRLTRRLLVEGGVG
CCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCHH
QFAEALAGATPPAQQKPLQVDAQQAQALQLAAARNQRFALERGSNAVAIGRELSANGRGM
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEECCEECCCCCEE
LLANPHFPWGGGMRFYQMHLTIPGKLDVMGAALPGLPLINIGFNQHLAWSHTVDTSKHFT
EEECCCCCCCCCCEEEEEEEECCCCEEEHHHCCCCCEEEEECCCCCEEEEECCCCCCCEE
LHRLQLDPKDSTRYLLDGQSVAMGKQQVSVDVKQADGSLKSVPRIVYSSIFGPVVQWPGK
EEEEEECCCCCCEEEECCCHHHCCCHHEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
LDWDSKFAFSLRDANLQNDRVLQQWYAMDKADSLKAFQDSVRKIQGIPWVNTLAVDAQGQ
CCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
ALYMNLSVVPNVDAARLARCSDPRIGTELIVLDGSRSECNWEVSAEAAQAGIYPSSRQPQ
EEEEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEHHHHHCCCCCCCCCCH
LLRTDFVQHSNDSAWMVNPAAPLQGFSPLISQDGQPLGQRARFALDRLESLKTAGKISVE
HHHHHHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEHH
NLQAMVMDNEVYQAGQVLPDLLTFCASELGDDAARLAPLCAALKDWDGRADLNSGIGFVY
HHHEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
FQKIMTSMQAVASRWRVAFDPQDPVHTPSGLAIENPSVATALRAAMLAAVDDVAKAGLPA
HHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCC
GSKWGDIQVSSISGKQIPIHGGPAGLGVYNAMQTVAGKDGKREVVSGTSYLQVVTFDEQG
CCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCC
PKAQGLLAFSESSNPQSAHSSDQTEAFSKKQWQALPFTEQQIKADPAYEVQVISEEPDR
CCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MIISRPLCSFVFAGLSFAVILPAQALVEPGNQAARAEIRRTGFGVPHIVAANERGLGYGI
CCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEC
GYAYAQDNLCLLANEVVTVNGQRSRYFGPDKATLEQRNNMASDLLFQWLNTPQALADFWN
EEEEECCCEEEEECCEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHC
AQPREIRQLMQGYVAGYNRSLAEQTTQGLPQPCAAEWVRPISTDDLLRLTRRLLVEGGVG
CCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCHH
QFAEALAGATPPAQQKPLQVDAQQAQALQLAAARNQRFALERGSNAVAIGRELSANGRGM
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEECCEECCCCCEE
LLANPHFPWGGGMRFYQMHLTIPGKLDVMGAALPGLPLINIGFNQHLAWSHTVDTSKHFT
EEECCCCCCCCCCEEEEEEEECCCCEEEHHHCCCCCEEEEECCCCCEEEEECCCCCCCEE
LHRLQLDPKDSTRYLLDGQSVAMGKQQVSVDVKQADGSLKSVPRIVYSSIFGPVVQWPGK
EEEEEECCCCCCEEEECCCHHHCCCHHEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
LDWDSKFAFSLRDANLQNDRVLQQWYAMDKADSLKAFQDSVRKIQGIPWVNTLAVDAQGQ
CCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
ALYMNLSVVPNVDAARLARCSDPRIGTELIVLDGSRSECNWEVSAEAAQAGIYPSSRQPQ
EEEEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEHHHHHCCCCCCCCCCH
LLRTDFVQHSNDSAWMVNPAAPLQGFSPLISQDGQPLGQRARFALDRLESLKTAGKISVE
HHHHHHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEHH
NLQAMVMDNEVYQAGQVLPDLLTFCASELGDDAARLAPLCAALKDWDGRADLNSGIGFVY
HHHEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
FQKIMTSMQAVASRWRVAFDPQDPVHTPSGLAIENPSVATALRAAMLAAVDDVAKAGLPA
HHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCC
GSKWGDIQVSSISGKQIPIHGGPAGLGVYNAMQTVAGKDGKREVVSGTSYLQVVTFDEQG
CCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCC
PKAQGLLAFSESSNPQSAHSSDQTEAFSKKQWQALPFTEQQIKADPAYEVQVISEEPDR
CCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA