| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045207
Identifier: 66045207
GI number: 66045207
Start: 2279123
End: 2280757
Strand: Direct
Name: 66045207
Synonym: Psyr_1967
Alternate gene names: NA
Gene position: 2279123-2280757 (Clockwise)
Preceding gene: 66045200
Following gene: 66045211
Centisome position: 37.4
GC content: 64.04
Gene sequence:
>1635_bases ATGACGATTTCTCGACGAGGGTTCATAGCGGGGCTGGCGCTGACCGGTGCGGCAGTTCCGGCAGCGTATTACGCGCATCG GGAACTCTCCCGGGTCGACCTGCCCGAAACGCCGGGCGAAGCGACGGCGGGGCCTGCCGATACCGCCACTCAGCGCCTGG CCGACAAGCTGCGCGGGGTGTGGACCCTGCGTTTCGAGGGGCGCGATGCCGGGCTGAGCGGTGCGCCGCTCGAAGGCCTG GAAATGTTTCTCGACATTGCCCCGCGCGGTCGCGGCCTGCGCGGCTATATCGACACGGCCGAACGATTGCGCAGCGATGG ACTGCCGCGTTTTCGGGTGATTGGCGATCTGCAACCGGCCAACGCCGCAAGACTCTACCTGCGGGTCATGGACGGCCATG CCGGCAATGACCCGCACAGCGACAACCCGGATTACGAATTCAGCCTGACCCTCGATGAAGTCTGGGGCGCATTCGGTAAC GCAGGCAGCGGCACCCTGAGCGGGCGTATCGAACGTCTGGACCGAGCGCTGGCCCTGCCGGAACTGGAAAGCCGTCTGAT CGCGATCAAGCAGGTGTTTCCAGAGGCGCGGGAAAGGGTCGGTCTGAGCCCGCCGTTTCTGGCCTGGCTGGTGTCCAGGG AGCATCGTCTGTTCCATCAGCTCTGGCATGCCTCGCGAGACAAATGGCACAAACTGCCCGAAGACAAGCGTGACGCCCTG CGCGGCATTGGCTGGCAGCCGGGCCCGCGTGAGCATGAGCGCGATGCGCGTGGCCCGCACAAGGACCGCAACGGCTCGGG TGAAGACTTCTTTTATATGCACCGGCACATGCTGATCCAGGCACGCAGGATTCAGGACTTGCCGTCATGGCCGCGCTTTC CGCTGCCGCAGCCTGAGCTGGAGCGCGACCGCCTGGGCTTTGCCCGCTATTTCGACAATCACGACGGTTGTTCTCTGCCG CCCAACTGGCTGGCGCACGGTGACGAGGAATACACCCAGCTGGTCAGCGATATCAAAAGCCACGAGACGTTTCATACGCA TTTTCAGGTCTGGGAGTCGCAGTATCGCGATCCGCGCTTCTTGTCGAAGTTGACGTTGGGGCAGTTCGGTTCGCAGGTCG AGCTGGAACTGCACGACTGGCTGCACATGCGCTGGGCCTCGGTGGCCCGCGACCCGGCCAACGGCCAGCCGGTGCCGATG GCACGTCGTTCGGATGATTTTGCCGAGCGCTGGTTCGAGCCGGAAAACGACTTTCTCGCCGACCCGTTTTCATCGCACGT GAACCCGGTGTTCTGGATGTTCCACGGCTGGATCGACGACCGCATAGAGGACTGGTTCCGCGCCCACGAGCGCTTCCATC CGGGTGAAGTGAAGCGCCTGGAAGTCAACGGCGTGCCGTGGTTTGCGCCAGGCCGCTGGGTGAACGTCAGCGACCCGTGG CTGGGGCCGGACACCCACGGTTGCAGTACCGTGCCCGGCCAGACCGCAGGCACGACCATGGAAATGGACCCGGAAGTCAT GAAGCTGGCGCTGCGCATCACCTTTGCGGCAGATGACAAACTGAGCAACCTGCTACGCCGCGTGCCCCGCAGGCCGTGGT ATGCCCGGAATTTGTTGCCGGACAGGTGGTTCTGA
Upstream 100 bases:
>100_bases TAGCGCGGGGTCATGGATGTGTGTGCAGCGCTAAATTTGTCTGCCGGGTTTACGTTCTAGCTTGGATAACGGCTGTCTCG GGGCTGGAACAGGTAGGGTA
Downstream 100 bases:
>100_bases CCAACGGCAGTGGAGGTTATCGTTCCCAGCGCTCCGGCTTTGGAGTGCCGTCCATGACGTTCTGTGGCGGAAGAGGACGC GGAGCGTCCAGAACGGCATG
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: PvdJ/PvdD/PvdP-Like Protein; Tat Pathway Signal Sequence Domain-Containing Protein; PvdD/PvdJ
Number of amino acids: Translated: 544; Mature: 543
Protein sequence:
>544_residues MTISRRGFIAGLALTGAAVPAAYYAHRELSRVDLPETPGEATAGPADTATQRLADKLRGVWTLRFEGRDAGLSGAPLEGL EMFLDIAPRGRGLRGYIDTAERLRSDGLPRFRVIGDLQPANAARLYLRVMDGHAGNDPHSDNPDYEFSLTLDEVWGAFGN AGSGTLSGRIERLDRALALPELESRLIAIKQVFPEARERVGLSPPFLAWLVSREHRLFHQLWHASRDKWHKLPEDKRDAL RGIGWQPGPREHERDARGPHKDRNGSGEDFFYMHRHMLIQARRIQDLPSWPRFPLPQPELERDRLGFARYFDNHDGCSLP PNWLAHGDEEYTQLVSDIKSHETFHTHFQVWESQYRDPRFLSKLTLGQFGSQVELELHDWLHMRWASVARDPANGQPVPM ARRSDDFAERWFEPENDFLADPFSSHVNPVFWMFHGWIDDRIEDWFRAHERFHPGEVKRLEVNGVPWFAPGRWVNVSDPW LGPDTHGCSTVPGQTAGTTMEMDPEVMKLALRITFAADDKLSNLLRRVPRRPWYARNLLPDRWF
Sequences:
>Translated_544_residues MTISRRGFIAGLALTGAAVPAAYYAHRELSRVDLPETPGEATAGPADTATQRLADKLRGVWTLRFEGRDAGLSGAPLEGL EMFLDIAPRGRGLRGYIDTAERLRSDGLPRFRVIGDLQPANAARLYLRVMDGHAGNDPHSDNPDYEFSLTLDEVWGAFGN AGSGTLSGRIERLDRALALPELESRLIAIKQVFPEARERVGLSPPFLAWLVSREHRLFHQLWHASRDKWHKLPEDKRDAL RGIGWQPGPREHERDARGPHKDRNGSGEDFFYMHRHMLIQARRIQDLPSWPRFPLPQPELERDRLGFARYFDNHDGCSLP PNWLAHGDEEYTQLVSDIKSHETFHTHFQVWESQYRDPRFLSKLTLGQFGSQVELELHDWLHMRWASVARDPANGQPVPM ARRSDDFAERWFEPENDFLADPFSSHVNPVFWMFHGWIDDRIEDWFRAHERFHPGEVKRLEVNGVPWFAPGRWVNVSDPW LGPDTHGCSTVPGQTAGTTMEMDPEVMKLALRITFAADDKLSNLLRRVPRRPWYARNLLPDRWF >Mature_543_residues TISRRGFIAGLALTGAAVPAAYYAHRELSRVDLPETPGEATAGPADTATQRLADKLRGVWTLRFEGRDAGLSGAPLEGLE MFLDIAPRGRGLRGYIDTAERLRSDGLPRFRVIGDLQPANAARLYLRVMDGHAGNDPHSDNPDYEFSLTLDEVWGAFGNA GSGTLSGRIERLDRALALPELESRLIAIKQVFPEARERVGLSPPFLAWLVSREHRLFHQLWHASRDKWHKLPEDKRDALR GIGWQPGPREHERDARGPHKDRNGSGEDFFYMHRHMLIQARRIQDLPSWPRFPLPQPELERDRLGFARYFDNHDGCSLPP NWLAHGDEEYTQLVSDIKSHETFHTHFQVWESQYRDPRFLSKLTLGQFGSQVELELHDWLHMRWASVARDPANGQPVPMA RRSDDFAERWFEPENDFLADPFSSHVNPVFWMFHGWIDDRIEDWFRAHERFHPGEVKRLEVNGVPWFAPGRWVNVSDPWL GPDTHGCSTVPGQTAGTTMEMDPEVMKLALRITFAADDKLSNLLRRVPRRPWYARNLLPDRWF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62505; Mature: 62374
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISRRGFIAGLALTGAAVPAAYYAHRELSRVDLPETPGEATAGPADTATQRLADKLRGV CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCE WTLRFEGRDAGLSGAPLEGLEMFLDIAPRGRGLRGYIDTAERLRSDGLPRFRVIGDLQPA EEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCC NAARLYLRVMDGHAGNDPHSDNPDYEFSLTLDEVWGAFGNAGSGTLSGRIERLDRALALP CHHEEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHCCH ELESRLIAIKQVFPEARERVGLSPPFLAWLVSREHRLFHQLWHASRDKWHKLPEDKRDAL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHH RGIGWQPGPREHERDARGPHKDRNGSGEDFFYMHRHMLIQARRIQDLPSWPRFPLPQPEL HCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ERDRLGFARYFDNHDGCSLPPNWLAHGDEEYTQLVSDIKSHETFHTHFQVWESQYRDPRF HHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHH LSKLTLGQFGSQVELELHDWLHMRWASVARDPANGQPVPMARRSDDFAERWFEPENDFLA HHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC DPFSSHVNPVFWMFHGWIDDRIEDWFRAHERFHPGEVKRLEVNGVPWFAPGRWVNVSDPW CCHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCCEEECCCCC LGPDTHGCSTVPGQTAGTTMEMDPEVMKLALRITFAADDKLSNLLRRVPRRPWYARNLLP CCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHEEECCCHHHHHHHHHCCCCCCHHHCCCC DRWF CCCC >Mature Secondary Structure TISRRGFIAGLALTGAAVPAAYYAHRELSRVDLPETPGEATAGPADTATQRLADKLRGV CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCE WTLRFEGRDAGLSGAPLEGLEMFLDIAPRGRGLRGYIDTAERLRSDGLPRFRVIGDLQPA EEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCC NAARLYLRVMDGHAGNDPHSDNPDYEFSLTLDEVWGAFGNAGSGTLSGRIERLDRALALP CHHEEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHCCH ELESRLIAIKQVFPEARERVGLSPPFLAWLVSREHRLFHQLWHASRDKWHKLPEDKRDAL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHH RGIGWQPGPREHERDARGPHKDRNGSGEDFFYMHRHMLIQARRIQDLPSWPRFPLPQPEL HCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ERDRLGFARYFDNHDGCSLPPNWLAHGDEEYTQLVSDIKSHETFHTHFQVWESQYRDPRF HHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHH LSKLTLGQFGSQVELELHDWLHMRWASVARDPANGQPVPMARRSDDFAERWFEPENDFLA HHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC DPFSSHVNPVFWMFHGWIDDRIEDWFRAHERFHPGEVKRLEVNGVPWFAPGRWVNVSDPW CCHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCCEEECCCCC LGPDTHGCSTVPGQTAGTTMEMDPEVMKLALRITFAADDKLSNLLRRVPRRPWYARNLLP CCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHEEECCCHHHHHHHHHCCCCCCHHHCCCC DRWF CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA