Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is yjjL [C]

Identifier: 66045139

GI number: 66045139

Start: 2172227

End: 2173489

Strand: Direct

Name: yjjL [C]

Synonym: Psyr_1898

Alternate gene names: 66045139

Gene position: 2172227-2173489 (Clockwise)

Preceding gene: 66045138

Following gene: 66045141

Centisome position: 35.65

GC content: 59.54

Gene sequence:

>1263_bases
ATGAGCAGTTCGGCCCTGGACGGTTCGCAACACCCCCTCAAAAGCAGCTTCTTCCTGCTGTTTCTGACGATCTTCATCCC
CTTCGGGCTGGGGCATTTCGTTTCCTACCTGTTTCGTACCGTCAACGCAGTGATCTACGTCGACCTGCAAACCGACCTGA
GCTTGCCCGCCAGCAGTCTGGGTTTGCTGACTGGTGTGTACTTTCTGACCTTCGCCGCCGCACAGATTCCGCTTGGCGTG
ATGCTGGACCGCTATGGGCCGCGCAGCGTTCAGGCGCCGATGCTGCTGTTCGCGGTCGCCGGCTCGGTCATCTTCAGTAT
TTCCAGCACCGAGACAGGGTTGTTGATCGGGCGAGGGCTGATTGGCCTGGGGGTAGCGGGCTCGCTGATGAGTGCGATCA
AAGCGTGTGCCATCTGGTTGCCGGTCGAGCGTTTGCCGCTGAGTACCGCCTGCCTGCTGTCGATTGGCGGGCTGGGGGCG
ATGGCGTCAACCACGCCATTACATGCGCTGCTGAGCTGGTTGACCTGGCGAGAGGCGTTTCTGGTTCTGGCGCTGCTGAC
CTTGTGTGTGGCGGTGGTGATACACCTTAGCGTTCCCAAAGCCTACGAGAGCAAAAAAACTCGCTACAGCGATATGTTTG
CCGCGGTCGGCAAGCTGTACGCGTCGTGGACATTCTGGCGTCTGGCGTTGTATTCGGTGTTCGCGCATGCCATCTACATG
TCGGTGCTGTCATTGTGGATGGGGCCGTGGTTGCGCGATATGGCCGGCCTGAGTGATTCCGCTATGGCCAATGTGCTGTT
GTTCGGAGCCATCGCGATGGTGGCAGGGGCTCTGACGTTCGGCGCGATCACCGACTACCTGCGCAGGTTCGGCGTACAGC
CGATCATGATCTGTGGCACCGGTATGCTGATCTTTATCGGCTTTCAGGTGCTGATGGCCAGCGGCTTGCCGGTATCGCCT
TACCTGATTGCCATGGGCTTCAGCTTCTTTGGCACCTCGACGACCATGAACTACGCCATCGTGGCGCAATCGGTGTCGCC
GGAGCTGGCGGGCAGGGTCAGTTCCTCGTTCAATCTGGTGGTGTTCGTGCTGGCGTTTTTCCTGCAGTGGCTGATGGGAG
CAGTACTTAATCTGTGGCCAGCGCCCCAGGGTGCCGGTCACCCGCTTGAGGCTTATCAGTGGTCGTTGGGCCTCATGATT
ACGCTGCAATTGCCTGGCGTGCTGCTCTGGCTCAGCTTTCGGCCCTGGAAACGCAAGGTCTGA

Upstream 100 bases:

>100_bases
CGGGCCGAACCCTGCGCAGGCAGGCTTCGGCCCGTTTTGTTTTGTGGCTGACCATGAGAATCTGTCACGCGCAGATTTTC
TGGACGATGGAGTATCAAGG

Downstream 100 bases:

>100_bases
AAACGCAAAACCCCGGCCGAGAGACTCTCGAGCCGGGGTTTTCTTGTTGCAATGCCGCGATCGATCAGCTGGCGGAAGCC
GCGACAGGCGCTTCAAGCTT

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Facilitator Family Transporter; Transporter MFS Superfamily; Sugar Phosphate Permease; Transporter Facilitator Family; Sugar Transport Family Protein; Carbohydrate Transport Membrane Protein; Intraphagosomal Amino Acid Transporter Family Protein; MFS Family Transporter; Facilitator Superfamily Permease

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MSSSALDGSQHPLKSSFFLLFLTIFIPFGLGHFVSYLFRTVNAVIYVDLQTDLSLPASSLGLLTGVYFLTFAAAQIPLGV
MLDRYGPRSVQAPMLLFAVAGSVIFSISSTETGLLIGRGLIGLGVAGSLMSAIKACAIWLPVERLPLSTACLLSIGGLGA
MASTTPLHALLSWLTWREAFLVLALLTLCVAVVIHLSVPKAYESKKTRYSDMFAAVGKLYASWTFWRLALYSVFAHAIYM
SVLSLWMGPWLRDMAGLSDSAMANVLLFGAIAMVAGALTFGAITDYLRRFGVQPIMICGTGMLIFIGFQVLMASGLPVSP
YLIAMGFSFFGTSTTMNYAIVAQSVSPELAGRVSSSFNLVVFVLAFFLQWLMGAVLNLWPAPQGAGHPLEAYQWSLGLMI
TLQLPGVLLWLSFRPWKRKV

Sequences:

>Translated_420_residues
MSSSALDGSQHPLKSSFFLLFLTIFIPFGLGHFVSYLFRTVNAVIYVDLQTDLSLPASSLGLLTGVYFLTFAAAQIPLGV
MLDRYGPRSVQAPMLLFAVAGSVIFSISSTETGLLIGRGLIGLGVAGSLMSAIKACAIWLPVERLPLSTACLLSIGGLGA
MASTTPLHALLSWLTWREAFLVLALLTLCVAVVIHLSVPKAYESKKTRYSDMFAAVGKLYASWTFWRLALYSVFAHAIYM
SVLSLWMGPWLRDMAGLSDSAMANVLLFGAIAMVAGALTFGAITDYLRRFGVQPIMICGTGMLIFIGFQVLMASGLPVSP
YLIAMGFSFFGTSTTMNYAIVAQSVSPELAGRVSSSFNLVVFVLAFFLQWLMGAVLNLWPAPQGAGHPLEAYQWSLGLMI
TLQLPGVLLWLSFRPWKRKV
>Mature_419_residues
SSSALDGSQHPLKSSFFLLFLTIFIPFGLGHFVSYLFRTVNAVIYVDLQTDLSLPASSLGLLTGVYFLTFAAAQIPLGVM
LDRYGPRSVQAPMLLFAVAGSVIFSISSTETGLLIGRGLIGLGVAGSLMSAIKACAIWLPVERLPLSTACLLSIGGLGAM
ASTTPLHALLSWLTWREAFLVLALLTLCVAVVIHLSVPKAYESKKTRYSDMFAAVGKLYASWTFWRLALYSVFAHAIYMS
VLSLWMGPWLRDMAGLSDSAMANVLLFGAIAMVAGALTFGAITDYLRRFGVQPIMICGTGMLIFIGFQVLMASGLPVSPY
LIAMGFSFFGTSTTMNYAIVAQSVSPELAGRVSSSFNLVVFVLAFFLQWLMGAVLNLWPAPQGAGHPLEAYQWSLGLMIT
LQLPGVLLWLSFRPWKRKV

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367379, Length=373, Percent_Identity=24.6648793565684, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45437; Mature: 45305

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSALDGSQHPLKSSFFLLFLTIFIPFGLGHFVSYLFRTVNAVIYVDLQTDLSLPASSL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCEEEEEEEECCCCCCHHHH
GLLTGVYFLTFAAAQIPLGVMLDRYGPRSVQAPMLLFAVAGSVIFSISSTETGLLIGRGL
HHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCEEECCH
IGLGVAGSLMSAIKACAIWLPVERLPLSTACLLSIGGLGAMASTTPLHALLSWLTWREAF
HHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
LVLALLTLCVAVVIHLSVPKAYESKKTRYSDMFAAVGKLYASWTFWRLALYSVFAHAIYM
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVLSLWMGPWLRDMAGLSDSAMANVLLFGAIAMVAGALTFGAITDYLRRFGVQPIMICGT
HHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
GMLIFIGFQVLMASGLPVSPYLIAMGFSFFGTSTTMNYAIVAQSVSPELAGRVSSSFNLV
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHCCCCHHH
VFVLAFFLQWLMGAVLNLWPAPQGAGHPLEAYQWSLGLMITLQLPGVLLWLSFRPWKRKV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEEEECCCEEEEEECCCCCCCC
>Mature Secondary Structure 
SSSALDGSQHPLKSSFFLLFLTIFIPFGLGHFVSYLFRTVNAVIYVDLQTDLSLPASSL
CCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCEEEEEEEECCCCCCHHHH
GLLTGVYFLTFAAAQIPLGVMLDRYGPRSVQAPMLLFAVAGSVIFSISSTETGLLIGRGL
HHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCEEECCH
IGLGVAGSLMSAIKACAIWLPVERLPLSTACLLSIGGLGAMASTTPLHALLSWLTWREAF
HHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
LVLALLTLCVAVVIHLSVPKAYESKKTRYSDMFAAVGKLYASWTFWRLALYSVFAHAIYM
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVLSLWMGPWLRDMAGLSDSAMANVLLFGAIAMVAGALTFGAITDYLRRFGVQPIMICGT
HHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
GMLIFIGFQVLMASGLPVSPYLIAMGFSFFGTSTTMNYAIVAQSVSPELAGRVSSSFNLV
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHCCCCHHH
VFVLAFFLQWLMGAVLNLWPAPQGAGHPLEAYQWSLGLMITLQLPGVLLWLSFRPWKRKV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEEEECCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA