| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is lysN [H]
Identifier: 66045085
GI number: 66045085
Start: 2121278
End: 2122444
Strand: Direct
Name: lysN [H]
Synonym: Psyr_1841
Alternate gene names: 66045085
Gene position: 2121278-2122444 (Clockwise)
Preceding gene: 66045082
Following gene: 66045086
Centisome position: 34.81
GC content: 61.35
Gene sequence:
>1167_bases ATGGCTTTCTCCGAACGCGTTTCCCGTCTGAAAAGTTCTCTGATTCGCGAGATCCTCGCCGCCGCTCAGTGTCCGGAAGT GATGTCGTTCGCCGGTGGTCTGCCCGCTGAGTCGATGCTGCCCAAAGTGGAGTGGGCCGACATGCCTGTTGCGCTGGGTC AGTACGGCATGAGCGAGGGCGAACCTGCGCTGCGCGAAGCGCTGGCCGCCGATGCTCGCGCCCTGGGTATCGACTGCGAT GCCCGTCAGGTCATGGTGGTCAGCGGTTCTCAGCAGACACTGGATCTGGCGGCCAAGCTGTACATCGACAAAGGCACCGA AATTCTCCTCGAGGCGCCTACTTATCTGGCGGCGCTGCAGATATTCCAGCTGTTCGGTGCCGACTGCATCACCGTGCCGC TGCAGGCCGAAGGCCCGGATCTGCTCGCCATGCGTCAGCGTCTGGAACAGCACAAGCCCGCCTTCGCCTACCTCATCCCG ACGTTCCAGAACCCCTCGGCGGTGCGCTACAGCCAGGCCAGTCGCGATGCCGTTGCGGCCTTGTTCGACGAGTTCGGTGT CACGTTGATCGAGGACGAGCCCTATCGTGAGTTGAGCTTTGACGGCGGCAGTGCCAGGCCGATCGTCAGCGGTTTGAAGA CGGCCAGCTGGATTTACACCGGTACGGTTTCCAAGACGCTGCTGCCAGGCCTGCGGGTCGGCTATCTGATCGCCAGCCCC GATCTGTTTCCGCACTTGCTGCGTCTGAAACAGTCGGCCGATCTGCATACCAATCGCCTCGGCCAGTGGCAGGCCTTGCA GTGGATTGGTACTGAGCACTATCGTGAGCATCTGGTGACGCTGTGCGAGTTTTACCGGGGCCGTCGTGATGCGTTCGAAA GTGCCTTGCAAACGCATTTTTCCGACCTGGCCACCTGGAACAGCCCGCAAGGCGGACTGTTCTTCTGGTTGACGCTGAAG CAGCCGCTGGACACGCGCACCTTGCTGGATACAGCGCTGGCGCACGATGTGGCGTTCATGCCGGGCGAACCTTTCTTTGC CGATCCGGACGCCAATCACGGTCACTTGCGGCTCAATTTCAGCCATATCGACCCTGCACGGCTCGATGAGGGTATAAAAC GACTGGCGTCGGTGGTCCGCGCAGCACACCTTCTGCAAGCCGCCTGA
Upstream 100 bases:
>100_bases TTTTTTAAGGTCAAGCATGTTGACGTATCCGGGTTGATCGTCGTAATTTGAGTCAATCAGTTTGACGTATTTCCAATTGT CTCGGCTACAGGTAACTGCC
Downstream 100 bases:
>100_bases TTCAAGACGTCAACATAGACGCAGCAAGGGAGCAGTCTGATGTACAAGGTTTATGGCGATTACAACTCGGGCAACTGCTA CAAGGTCAAGCTGATGCTTA
Product: aminotransferase, class I and II
Products: NA
Alternate protein names: 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT [H]
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MAFSERVSRLKSSLIREILAAAQCPEVMSFAGGLPAESMLPKVEWADMPVALGQYGMSEGEPALREALAADARALGIDCD ARQVMVVSGSQQTLDLAAKLYIDKGTEILLEAPTYLAALQIFQLFGADCITVPLQAEGPDLLAMRQRLEQHKPAFAYLIP TFQNPSAVRYSQASRDAVAALFDEFGVTLIEDEPYRELSFDGGSARPIVSGLKTASWIYTGTVSKTLLPGLRVGYLIASP DLFPHLLRLKQSADLHTNRLGQWQALQWIGTEHYREHLVTLCEFYRGRRDAFESALQTHFSDLATWNSPQGGLFFWLTLK QPLDTRTLLDTALAHDVAFMPGEPFFADPDANHGHLRLNFSHIDPARLDEGIKRLASVVRAAHLLQAA
Sequences:
>Translated_388_residues MAFSERVSRLKSSLIREILAAAQCPEVMSFAGGLPAESMLPKVEWADMPVALGQYGMSEGEPALREALAADARALGIDCD ARQVMVVSGSQQTLDLAAKLYIDKGTEILLEAPTYLAALQIFQLFGADCITVPLQAEGPDLLAMRQRLEQHKPAFAYLIP TFQNPSAVRYSQASRDAVAALFDEFGVTLIEDEPYRELSFDGGSARPIVSGLKTASWIYTGTVSKTLLPGLRVGYLIASP DLFPHLLRLKQSADLHTNRLGQWQALQWIGTEHYREHLVTLCEFYRGRRDAFESALQTHFSDLATWNSPQGGLFFWLTLK QPLDTRTLLDTALAHDVAFMPGEPFFADPDANHGHLRLNFSHIDPARLDEGIKRLASVVRAAHLLQAA >Mature_387_residues AFSERVSRLKSSLIREILAAAQCPEVMSFAGGLPAESMLPKVEWADMPVALGQYGMSEGEPALREALAADARALGIDCDA RQVMVVSGSQQTLDLAAKLYIDKGTEILLEAPTYLAALQIFQLFGADCITVPLQAEGPDLLAMRQRLEQHKPAFAYLIPT FQNPSAVRYSQASRDAVAALFDEFGVTLIEDEPYRELSFDGGSARPIVSGLKTASWIYTGTVSKTLLPGLRVGYLIASPD LFPHLLRLKQSADLHTNRLGQWQALQWIGTEHYREHLVTLCEFYRGRRDAFESALQTHFSDLATWNSPQGGLFFWLTLKQ PLDTRTLLDTALAHDVAFMPGEPFFADPDANHGHLRLNFSHIDPARLDEGIKRLASVVRAAHLLQAA
Specific function: Catalyzes the transfer of an amino group between 2- oxoadipate (2-OA) and glutamate (Glu) to yield alpha-aminodipate (AAA). It can also transaminate glutamate, leucine, and aromatic amino acids. It also conbtributes in the biosynthesis of other amino acid
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705897, Length=395, Percent_Identity=27.0886075949367, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI33469970, Length=395, Percent_Identity=27.0886075949367, Blast_Score=131, Evalue=1e-30, Organism=Escherichia coli, GI1787710, Length=378, Percent_Identity=24.6031746031746, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1790797, Length=344, Percent_Identity=23.2558139534884, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1788722, Length=386, Percent_Identity=24.6113989637306, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1786816, Length=377, Percent_Identity=24.6684350132626, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.39 [H]
Molecular weight: Translated: 42834; Mature: 42703
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFSERVSRLKSSLIREILAAAQCPEVMSFAGGLPAESMLPKVEWADMPVALGQYGMSEG CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHCCCCCC EPALREALAADARALGIDCDARQVMVVSGSQQTLDLAAKLYIDKGTEILLEAPTYLAALQ CHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHEECCCCEEEEECHHHHHHHH IFQLFGADCITVPLQAEGPDLLAMRQRLEQHKPAFAYLIPTFQNPSAVRYSQASRDAVAA HHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHH LFDEFGVTLIEDEPYRELSFDGGSARPIVSGLKTASWIYTGTVSKTLLPGLRVGYLIASP HHHHHCCEEECCCCCCEECCCCCCCCHHHHHHHHHHEEEECCHHHHHCCCCCEEEEEECC DLFPHLLRLKQSADLHTNRLGQWQALQWIGTEHYREHLVTLCEFYRGRRDAFESALQTHF HHHHHHHHHHHCCCHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH SDLATWNSPQGGLFFWLTLKQPLDTRTLLDTALAHDVAFMPGEPFFADPDANHGHLRLNF HHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEE SHIDPARLDEGIKRLASVVRAAHLLQAA CCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AFSERVSRLKSSLIREILAAAQCPEVMSFAGGLPAESMLPKVEWADMPVALGQYGMSEG CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHCCCCCC EPALREALAADARALGIDCDARQVMVVSGSQQTLDLAAKLYIDKGTEILLEAPTYLAALQ CHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHEECCCCEEEEECHHHHHHHH IFQLFGADCITVPLQAEGPDLLAMRQRLEQHKPAFAYLIPTFQNPSAVRYSQASRDAVAA HHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHH LFDEFGVTLIEDEPYRELSFDGGSARPIVSGLKTASWIYTGTVSKTLLPGLRVGYLIASP HHHHHCCEEECCCCCCEECCCCCCCCHHHHHHHHHHEEEECCHHHHHCCCCCEEEEEECC DLFPHLLRLKQSADLHTNRLGQWQALQWIGTEHYREHLVTLCEFYRGRRDAFESALQTHF HHHHHHHHHHHCCCHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH SDLATWNSPQGGLFFWLTLKQPLDTRTLLDTALAHDVAFMPGEPFFADPDANHGHLRLNF HHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEE SHIDPARLDEGIKRLASVVRAAHLLQAA CCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA