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The map label for this gene is ldcA [C]

Identifier: 66045082

GI number: 66045082

Start: 2118451

End: 2119386

Strand: Direct

Name: ldcA [C]

Synonym: Psyr_1838

Alternate gene names: 66045082

Gene position: 2118451-2119386 (Clockwise)

Preceding gene: 66045080

Following gene: 66045085

Centisome position: 34.76

GC content: 65.38

Gene sequence:

>936_bases
ATGCCTGCTACCTCTTCGAACACTCTCCACCCCCGGGCTCTGCGACCTGGCGACGCCGTTGCGCTGGTATCTCCGGCAGG
GCCTGTGGACCCCGGCAAGATCCAGGCGGCGGTGGCGGTGCTTGAGGGGTGGGGGTTGCGTCCTCGGGTCTATCCGCATG
CGCTGGGCAGCTACTCGTTCTATTCCGGGACCGATGAACAGCGGCTCGCCGACCTCAACGCCGCGCTGGCCGATCCGGAA
ATCCGTGCGGTCATCTGCACTCGCGGTGGTTATGGCGTGCAAAGGATTGTCCAGCAGGTGGATATGGACGCGGTGCGTCG
TGACCCCAAGCTGGTGACCGGCTTTTCCGATATCACCGCGTTGCACGGTGCGCTGTGGAACCACGCGCGCCTGGCGACCA
TCCATGGACCGGTCGCTTCGCAGCTGGAACGTGGCGGCCTGTTCGTCAGCGGTATGCGCCATGTGCTGATGAGCACCGAG
CCGGTCCTGCTAAAGGCTGATCCGGCCTCGCCAACCGCCAGGGTCAGAACCGCTGGCAGCGCGCAGGGCCTGCTGTTGGG
CGGCAACCTGTGCATCCTCGATACCTCCGTGGGTACGCCGTTCATGCCCGACCTGAGCGGTGCGATCCTGCTCATCGAAG
AGGTCAACGAACCTGCCTACCGGGTCGACCGCATGCTCACCCACCTGGGCAACTGCGGGATTCTTGCGTCTCTGGCCGGC
ATTGCCGTCGGCGAATTTACCCCTGCCGCGAACACTGGCCGCACCATCAGCCCCGCCGATGTGCTGATGGAGCGGCTGGG
CAGTCTTGGCATTCCGGTGCTCGGCGGTGTGCCTGTAGGGCATGGAAATCCCAATCAGGCCGTGCCACTGGGCACTCAGG
CGATACTCGATGCCGACGCCGGAACTCTGCTGGTAGCCCCCGCCGCGCGTAGCTGA

Upstream 100 bases:

>100_bases
AGACGGATCTGCGAATGAAACATTCTGACGACGGATATGGCTTGAGTCGCCCACCCTCAGTGCTCTAGATTCCTTGTTCG
ATCAACACTTGGAAGACATC

Downstream 100 bases:

>100_bases
TGTCTCTGTCGTGCTGCTGGCGGCTGGCCTAATCGGTCTTGCGTGTGTTCAGGATCAGCAAGGCTAGCAAGCCCGCTACG
ATGCCCCAGAATGCCGAGCC

Product: peptidase U61, LD-carboxypeptidase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MPATSSNTLHPRALRPGDAVALVSPAGPVDPGKIQAAVAVLEGWGLRPRVYPHALGSYSFYSGTDEQRLADLNAALADPE
IRAVICTRGGYGVQRIVQQVDMDAVRRDPKLVTGFSDITALHGALWNHARLATIHGPVASQLERGGLFVSGMRHVLMSTE
PVLLKADPASPTARVRTAGSAQGLLLGGNLCILDTSVGTPFMPDLSGAILLIEEVNEPAYRVDRMLTHLGNCGILASLAG
IAVGEFTPAANTGRTISPADVLMERLGSLGIPVLGGVPVGHGNPNQAVPLGTQAILDADAGTLLVAPAARS

Sequences:

>Translated_311_residues
MPATSSNTLHPRALRPGDAVALVSPAGPVDPGKIQAAVAVLEGWGLRPRVYPHALGSYSFYSGTDEQRLADLNAALADPE
IRAVICTRGGYGVQRIVQQVDMDAVRRDPKLVTGFSDITALHGALWNHARLATIHGPVASQLERGGLFVSGMRHVLMSTE
PVLLKADPASPTARVRTAGSAQGLLLGGNLCILDTSVGTPFMPDLSGAILLIEEVNEPAYRVDRMLTHLGNCGILASLAG
IAVGEFTPAANTGRTISPADVLMERLGSLGIPVLGGVPVGHGNPNQAVPLGTQAILDADAGTLLVAPAARS
>Mature_310_residues
PATSSNTLHPRALRPGDAVALVSPAGPVDPGKIQAAVAVLEGWGLRPRVYPHALGSYSFYSGTDEQRLADLNAALADPEI
RAVICTRGGYGVQRIVQQVDMDAVRRDPKLVTGFSDITALHGALWNHARLATIHGPVASQLERGGLFVSGMRHVLMSTEP
VLLKADPASPTARVRTAGSAQGLLLGGNLCILDTSVGTPFMPDLSGAILLIEEVNEPAYRVDRMLTHLGNCGILASLAGI
AVGEFTPAANTGRTISPADVLMERLGSLGIPVLGGVPVGHGNPNQAVPLGTQAILDADAGTLLVAPAARS

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

Organism=Escherichia coli, GI1787441, Length=253, Percent_Identity=32.4110671936759, Blast_Score=122, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 32207; Mature: 32076

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATSSNTLHPRALRPGDAVALVSPAGPVDPGKIQAAVAVLEGWGLRPRVYPHALGSYSF
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCC
YSGTDEQRLADLNAALADPEIRAVICTRGGYGVQRIVQQVDMDAVRRDPKLVTGFSDITA
CCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCHHHHHCCCCEEECHHHHHH
LHGALWNHARLATIHGPVASQLERGGLFVSGMRHVLMSTEPVLLKADPASPTARVRTAGS
HHHHHHCCEEEEEECCHHHHHHHHCCEEHHHHHHHHHCCCCEEEEECCCCCCCEEEECCC
AQGLLLGGNLCILDTSVGTPFMPDLSGAILLIEEVNEPAYRVDRMLTHLGNCGILASLAG
CCEEEEECCEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHH
IAVGEFTPAANTGRTISPADVLMERLGSLGIPVLGGVPVGHGNPNQAVPLGTQAILDADA
HHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCHHEEECCC
GTLLVAPAARS
CEEEEECCCCC
>Mature Secondary Structure 
PATSSNTLHPRALRPGDAVALVSPAGPVDPGKIQAAVAVLEGWGLRPRVYPHALGSYSF
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCC
YSGTDEQRLADLNAALADPEIRAVICTRGGYGVQRIVQQVDMDAVRRDPKLVTGFSDITA
CCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCHHHHHCCCCEEECHHHHHH
LHGALWNHARLATIHGPVASQLERGGLFVSGMRHVLMSTEPVLLKADPASPTARVRTAGS
HHHHHHCCEEEEEECCHHHHHHHHCCEEHHHHHHHHHCCCCEEEEECCCCCCCEEEECCC
AQGLLLGGNLCILDTSVGTPFMPDLSGAILLIEEVNEPAYRVDRMLTHLGNCGILASLAG
CCEEEEECCEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHH
IAVGEFTPAANTGRTISPADVLMERLGSLGIPVLGGVPVGHGNPNQAVPLGTQAILDADA
HHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCHHEEECCC
GTLLVAPAARS
CEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]