Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is yejA [C]

Identifier: 66045003

GI number: 66045003

Start: 1997504

End: 1999360

Strand: Reverse

Name: yejA [C]

Synonym: Psyr_1758

Alternate gene names: 66045003

Gene position: 1999360-1997504 (Counterclockwise)

Preceding gene: 66045004

Following gene: 66045002

Centisome position: 32.81

GC content: 60.2

Gene sequence:

>1857_bases
ATGAACCCTCTGCACTCCCTGCGCTCGCAGGCAGCCGGCCTGCTGCTGGCCAGCCTCGCCTGCACGGTACAGGCTGCGCC
TCAGCATGGCGTGACGCTGTACGACGAAGCGCCGAAATACCCGGCTGATTTCAAGCATTTCGACTACGTGAACCCGGATG
CCCCCAAGGGCGGCACGCTGCGCCAGGCAGGCTTCGGCGGTTTCGACAGTCTCAACCCGTTCATCAACAAGGGCGTACCG
GCAGACGACATTGGTCTGATCTACGACACCCTGGCCCGCGCTAGCCTGGACGAACCCTTCAGTGAATACGGGCTGGTTGC
CGGCAAAATCGAGAAAGCGCCGGACAACAGCTGGGTGCGCTTCTACCTGCGGCCTGAAGCACGCTTCCATGACGGCCACC
CGATCCGCGCCGAAGATGTGGAATTCAGCTTCAAGACCCTGATGGAACACGGCTCGCCCATGTACAAGGGCTACTACGCC
GACGTCGATCAGGTCGTCGTCGAAGACCCGCTGCGGGTGCTGTTCAAATTCAAGCACAAGGGCAGCCGCGAAATGCCGCT
GATTCTTGGCCAGTTGCCCGTGCTGCCCAAGCACTTCTGGGCCGACCGCGACTTCAGCAAAGGCAACCTGGACTTCCCGC
TGGGCAGCGGGCCGTACAAGGTGGTCGATGTAAAAGCCGGGCGCTCGGTGAGTTATGAGCGGGTCAAGGATTACTGGGCA
AAGGATTTGCCGATCAACAAGGGTTTCTACAACTTCGATGTACTGACCACCGACTACTACCGCGACAACACAGTAGCGCT
GGAGGCCGGCAAGGCCGGGCAGTTCGACTACTGGATAGAGACCAGCGCCAAGAACTGGGCGACCGCCTACAACACCCCGG
CAGTTCGCGATGGCAGGCTGGTCAAGGAAGAGCTGCCCAACGGTAACCCGACCGGTATGCAGGGGTTCGTTTTCAACTTG
CGCAAACCGGTATTCCAGGACGCGCGGGTGCGCGAAGCGCTGACCTTGCTGCTGGATTTCGAGTGGACCAACAAACAGCT
TTTCAACGGTGCCTACAGCCGTACCAAAAGTTATTTCGACAACTCGGAAATGGCCTCAAGCGGCCTGCCCTCTGCCGAGG
AACTGAAAATCCTCGAACCGCTGCGCGGCAAGATTCCGGATCGGGTATTCACCGAGGCTTTTCAGTTACCGGTTAACGAC
GGCAGCGGCATGATTCGCCCACAACAACGTCGGGCATTCCAGCTGTTGCAGGAAGCGGGCTGGAAGATCGTCGACGACAA
GATGGTCGACGCGCAGGGCAACCCGGTAAAACTGGAGTTTCTGATCGCCCAGACCGAGTTCGAGCGCATTCTGCTGCCTT
ACAAGCGCAACCTGAGTGACCTGGGTATTGAACTGGTGATCCGCCGGGCCGACGTGTCGCAATACATTAACCGCCTGCGC
TCGCGGGACTACGACATGATCGTCACGGGCTATCCGCAGTCCAGCTCGCCCGGTAACGAACAGCGCGTGTACTTCGACTC
CTCCAGCGCCGACAACCCGGGCAGCCGCAACTTCATGGGCCTCAAGGACCCTGCGGTGGACTCTCTCGTCAACGGCCTGA
TCAACGCCGACTCACGGCAAAGCCTGATCACCCATACCAAGGCGCTGGACCGCGTGCTGCTGTGGGGCTTTTACGTCGTC
CCGAACTGGCACATCAAGACCTGGCGGGTGGCTTACTGGAATCACCTCGACCATCCCAAGGCCGAAGCGCTTTCCGATAT
CGGCCTGATGACCTGGTGGGCCAAGCCGGATGTCAAACCGGTGACCGCGACCCCGTCAGCCCCTGATCAGGCCAAGCCTG
CGAACGCGGAGCAATAA

Upstream 100 bases:

>100_bases
ATCATCGGCTTGCCTATCGCAACCGATTCGCCATGGTCACTACCCCGCCCTATACCCTGGGGCTGCGTGCGTGGTGGCTC
AAGACTCTGGAGAAGCCCCG

Downstream 100 bases:

>100_bases
ACATGCTGGCTTATATTCTGCGACGGCTGCTGCTGATCATCCCTACCCTGCTGGGCATCCTGATCATCAACTTCGTCATC
ATTCAGGCCGCCCCCGGTGG

Product: extracellular solute-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 618; Mature: 618

Protein sequence:

>618_residues
MNPLHSLRSQAAGLLLASLACTVQAAPQHGVTLYDEAPKYPADFKHFDYVNPDAPKGGTLRQAGFGGFDSLNPFINKGVP
ADDIGLIYDTLARASLDEPFSEYGLVAGKIEKAPDNSWVRFYLRPEARFHDGHPIRAEDVEFSFKTLMEHGSPMYKGYYA
DVDQVVVEDPLRVLFKFKHKGSREMPLILGQLPVLPKHFWADRDFSKGNLDFPLGSGPYKVVDVKAGRSVSYERVKDYWA
KDLPINKGFYNFDVLTTDYYRDNTVALEAGKAGQFDYWIETSAKNWATAYNTPAVRDGRLVKEELPNGNPTGMQGFVFNL
RKPVFQDARVREALTLLLDFEWTNKQLFNGAYSRTKSYFDNSEMASSGLPSAEELKILEPLRGKIPDRVFTEAFQLPVND
GSGMIRPQQRRAFQLLQEAGWKIVDDKMVDAQGNPVKLEFLIAQTEFERILLPYKRNLSDLGIELVIRRADVSQYINRLR
SRDYDMIVTGYPQSSSPGNEQRVYFDSSSADNPGSRNFMGLKDPAVDSLVNGLINADSRQSLITHTKALDRVLLWGFYVV
PNWHIKTWRVAYWNHLDHPKAEALSDIGLMTWWAKPDVKPVTATPSAPDQAKPANAEQ

Sequences:

>Translated_618_residues
MNPLHSLRSQAAGLLLASLACTVQAAPQHGVTLYDEAPKYPADFKHFDYVNPDAPKGGTLRQAGFGGFDSLNPFINKGVP
ADDIGLIYDTLARASLDEPFSEYGLVAGKIEKAPDNSWVRFYLRPEARFHDGHPIRAEDVEFSFKTLMEHGSPMYKGYYA
DVDQVVVEDPLRVLFKFKHKGSREMPLILGQLPVLPKHFWADRDFSKGNLDFPLGSGPYKVVDVKAGRSVSYERVKDYWA
KDLPINKGFYNFDVLTTDYYRDNTVALEAGKAGQFDYWIETSAKNWATAYNTPAVRDGRLVKEELPNGNPTGMQGFVFNL
RKPVFQDARVREALTLLLDFEWTNKQLFNGAYSRTKSYFDNSEMASSGLPSAEELKILEPLRGKIPDRVFTEAFQLPVND
GSGMIRPQQRRAFQLLQEAGWKIVDDKMVDAQGNPVKLEFLIAQTEFERILLPYKRNLSDLGIELVIRRADVSQYINRLR
SRDYDMIVTGYPQSSSPGNEQRVYFDSSSADNPGSRNFMGLKDPAVDSLVNGLINADSRQSLITHTKALDRVLLWGFYVV
PNWHIKTWRVAYWNHLDHPKAEALSDIGLMTWWAKPDVKPVTATPSAPDQAKPANAEQ
>Mature_618_residues
MNPLHSLRSQAAGLLLASLACTVQAAPQHGVTLYDEAPKYPADFKHFDYVNPDAPKGGTLRQAGFGGFDSLNPFINKGVP
ADDIGLIYDTLARASLDEPFSEYGLVAGKIEKAPDNSWVRFYLRPEARFHDGHPIRAEDVEFSFKTLMEHGSPMYKGYYA
DVDQVVVEDPLRVLFKFKHKGSREMPLILGQLPVLPKHFWADRDFSKGNLDFPLGSGPYKVVDVKAGRSVSYERVKDYWA
KDLPINKGFYNFDVLTTDYYRDNTVALEAGKAGQFDYWIETSAKNWATAYNTPAVRDGRLVKEELPNGNPTGMQGFVFNL
RKPVFQDARVREALTLLLDFEWTNKQLFNGAYSRTKSYFDNSEMASSGLPSAEELKILEPLRGKIPDRVFTEAFQLPVND
GSGMIRPQQRRAFQLLQEAGWKIVDDKMVDAQGNPVKLEFLIAQTEFERILLPYKRNLSDLGIELVIRRADVSQYINRLR
SRDYDMIVTGYPQSSSPGNEQRVYFDSSSADNPGSRNFMGLKDPAVDSLVNGLINADSRQSLITHTKALDRVLLWGFYVV
PNWHIKTWRVAYWNHLDHPKAEALSDIGLMTWWAKPDVKPVTATPSAPDQAKPANAEQ

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=601, Percent_Identity=39.6006655574043, Blast_Score=442, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 69752; Mature: 69752

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLHSLRSQAAGLLLASLACTVQAAPQHGVTLYDEAPKYPADFKHFDYVNPDAPKGGTL
CCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
RQAGFGGFDSLNPFINKGVPADDIGLIYDTLARASLDEPFSEYGLVAGKIEKAPDNSWVR
CCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCEEEECCCCCCCCEEE
FYLRPEARFHDGHPIRAEDVEFSFKTLMEHGSPMYKGYYADVDQVVVEDPLRVLFKFKHK
EEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
GSREMPLILGQLPVLPKHFWADRDFSKGNLDFPLGSGPYKVVDVKAGRSVSYERVKDYWA
CCCCCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHH
KDLPINKGFYNFDVLTTDYYRDNTVALEAGKAGQFDYWIETSAKNWATAYNTPAVRDGRL
HCCCCCCCEEEEEEEEECEECCCEEEEECCCCCCEEEEEECCCCCCEEECCCCCCCCCCH
VKEELPNGNPTGMQGFVFNLRKPVFQDARVREALTLLLDFEWTNKQLFNGAYSRTKSYFD
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCC
NSEMASSGLPSAEELKILEPLRGKIPDRVFTEAFQLPVNDGSGMIRPQQRRAFQLLQEAG
CCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
WKIVDDKMVDAQGNPVKLEFLIAQTEFERILLPYKRNLSDLGIELVIRRADVSQYINRLR
CEEECCEEECCCCCCEEEEEEEEECCHHHHHCCHHCCHHHCCEEEEEEHHHHHHHHHHHH
SRDYDMIVTGYPQSSSPGNEQRVYFDSSSADNPGSRNFMGLKDPAVDSLVNGLINADSRQ
CCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHH
SLITHTKALDRVLLWGFYVVPNWHIKTWRVAYWNHLDHPKAEALSDIGLMTWWAKPDVKP
HHHHHHHHHHHHHHHHEEEECCCEEEEEEEEECCCCCCCHHHHHHHCCEEEEECCCCCCE
VTATPSAPDQAKPANAEQ
EECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNPLHSLRSQAAGLLLASLACTVQAAPQHGVTLYDEAPKYPADFKHFDYVNPDAPKGGTL
CCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
RQAGFGGFDSLNPFINKGVPADDIGLIYDTLARASLDEPFSEYGLVAGKIEKAPDNSWVR
CCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCEEEECCCCCCCCEEE
FYLRPEARFHDGHPIRAEDVEFSFKTLMEHGSPMYKGYYADVDQVVVEDPLRVLFKFKHK
EEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
GSREMPLILGQLPVLPKHFWADRDFSKGNLDFPLGSGPYKVVDVKAGRSVSYERVKDYWA
CCCCCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHH
KDLPINKGFYNFDVLTTDYYRDNTVALEAGKAGQFDYWIETSAKNWATAYNTPAVRDGRL
HCCCCCCCEEEEEEEEECEECCCEEEEECCCCCCEEEEEECCCCCCEEECCCCCCCCCCH
VKEELPNGNPTGMQGFVFNLRKPVFQDARVREALTLLLDFEWTNKQLFNGAYSRTKSYFD
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCC
NSEMASSGLPSAEELKILEPLRGKIPDRVFTEAFQLPVNDGSGMIRPQQRRAFQLLQEAG
CCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
WKIVDDKMVDAQGNPVKLEFLIAQTEFERILLPYKRNLSDLGIELVIRRADVSQYINRLR
CEEECCEEECCCCCCEEEEEEEEECCHHHHHCCHHCCHHHCCEEEEEEHHHHHHHHHHHH
SRDYDMIVTGYPQSSSPGNEQRVYFDSSSADNPGSRNFMGLKDPAVDSLVNGLINADSRQ
CCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHH
SLITHTKALDRVLLWGFYVVPNWHIKTWRVAYWNHLDHPKAEALSDIGLMTWWAKPDVKP
HHHHHHHHHHHHHHHHEEEECCCEEEEEEEEECCCCCCCHHHHHHHCCEEEEECCCCCCE
VTATPSAPDQAKPANAEQ
EECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA