| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is proP [H]
Identifier: 66044922
GI number: 66044922
Start: 1885684
End: 1887021
Strand: Direct
Name: proP [H]
Synonym: Psyr_1677
Alternate gene names: 66044922
Gene position: 1885684-1887021 (Clockwise)
Preceding gene: 66044921
Following gene: 66044926
Centisome position: 30.94
GC content: 62.56
Gene sequence:
>1338_bases ATGACCACTACTACCGTAGAGCAAGTCGACCCTGCCACGCTGAAAAAAGTCATCGTCGCTGCGGCCATCGGCAACTTCGT CGAGTGGTTCGATTTTGCCGTCTATGGATTTCTGGCGACGACGATCGCGCTGCAGTTTTTCCCCAGCGGCGACAGCAGTG CAGCGTTGTTGAAAACCTTTGCCGTGTTCGCCGTGGCCTTTGCATTCAGACCGCTGGGCGGGATTTTCTTCGGCATGCTG GGTGACCGGATCGGGCGCAAGAAAACCCTGGCCATGACCATCCTGCTGATGGCCGGCGCCACCACACTGATCGGCCTGTT GCCGACCTATGCCGCGATCGGTGTGATGGCACCGGTGCTGCTGACCATCATTCGCTGTGCGCAGGGTTTCTCGGCCGGCG GCGAGTATGCCGGTGCCTGCGCGTACCTCATGGAGCACGCGCCGCGCACGCAACGTGCCTGGTACGGCAGCTTCGTTCCG GTCTCGACGTTCTCCGCATTCGCTGCCGCAGCAGTAGTGGCCTACGCGCTTGAGTCGTTGCTGTCGACCGAGGCCATGGG CAACTGGGGCTGGCGTCTGCCGTTTCTGATTGCTGCGCCGCTGGGGCTGGTCGGGCTGTACCTGCGCTGGAAGCTCGATG AAACCCCGGCGTTTCAGGCGGTTGCTCAAGAACACGCCGTGGCTCACTCGCCGCTCAAGGATACCTTGCGCCATCACGCC GCGGCGATGTGCTGTCTGGGCGCATTCGTGTCACTGACGGCGTTGTCGTTCTACATGTTCACCACCTACTTCGCGACCTA CCTGCAAGTGGCCGGTGGACTGAGCAGGGCAACGGCGCTGCTGGTCTCGTTGATCGCGCTGGCCTTCGCCGCCGCCCTCT GCCCACTGGCCGGTGCCTATTCGGATCGGGTAGGGCGCCGGGTCACCATGGCAACGGCCTGCATTCTGTTGATGGTCGTG GTGGTTCCATCATTCCTGATGGCCAGCTCCGGCTCGTTCATCGCCTCGATCATCGGCGTCATGCTGCTCGCCGTGGGCGC AGTGCTGTGTGGCGTGGTAACAGCCGCACTGCTGTCGGAAACCTTTCCCACCCGTACCCGCTACACCGCCTCGGCGATCA CCTACAACATGGCCTACACCCTGTTCGGCGGCACCGCGCCGCTGATGGCAACCTGGCTGATCAGCATGACCGGCAGCAAC CTGTCGCCCGCGTTCTACCTCATCGCCGTGGCAGCACTGGCAATGGCCGGCGGCATGGCCCTGCCGGAAACCTCGAAAAT ATCGTTGCATGATGTACCTGTTACAGGCGAGGAACCGGTGGTGGGGTCAATTGCCTGA
Upstream 100 bases:
>100_bases GACGTCGGCCCTGACTACGTGGATGACACTTCTGGAGAGGGGCATCCGGGTCGCTGTCTCGATAATCGATCCATTCCAGA TCAACACGCCGAGGCCCGCC
Downstream 100 bases:
>100_bases GGGCAGAGGCCGGAAACGAACATGGCTCGCATCGCAGAGCGCTGTGTGACGCAGAGCGTCACGAACTGCATTCCCACGCG GAGCGTTGGAACGATAGTCA
Product: major facilitator transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MTTTTVEQVDPATLKKVIVAAAIGNFVEWFDFAVYGFLATTIALQFFPSGDSSAALLKTFAVFAVAFAFRPLGGIFFGML GDRIGRKKTLAMTILLMAGATTLIGLLPTYAAIGVMAPVLLTIIRCAQGFSAGGEYAGACAYLMEHAPRTQRAWYGSFVP VSTFSAFAAAAVVAYALESLLSTEAMGNWGWRLPFLIAAPLGLVGLYLRWKLDETPAFQAVAQEHAVAHSPLKDTLRHHA AAMCCLGAFVSLTALSFYMFTTYFATYLQVAGGLSRATALLVSLIALAFAAALCPLAGAYSDRVGRRVTMATACILLMVV VVPSFLMASSGSFIASIIGVMLLAVGAVLCGVVTAALLSETFPTRTRYTASAITYNMAYTLFGGTAPLMATWLISMTGSN LSPAFYLIAVAALAMAGGMALPETSKISLHDVPVTGEEPVVGSIA
Sequences:
>Translated_445_residues MTTTTVEQVDPATLKKVIVAAAIGNFVEWFDFAVYGFLATTIALQFFPSGDSSAALLKTFAVFAVAFAFRPLGGIFFGML GDRIGRKKTLAMTILLMAGATTLIGLLPTYAAIGVMAPVLLTIIRCAQGFSAGGEYAGACAYLMEHAPRTQRAWYGSFVP VSTFSAFAAAAVVAYALESLLSTEAMGNWGWRLPFLIAAPLGLVGLYLRWKLDETPAFQAVAQEHAVAHSPLKDTLRHHA AAMCCLGAFVSLTALSFYMFTTYFATYLQVAGGLSRATALLVSLIALAFAAALCPLAGAYSDRVGRRVTMATACILLMVV VVPSFLMASSGSFIASIIGVMLLAVGAVLCGVVTAALLSETFPTRTRYTASAITYNMAYTLFGGTAPLMATWLISMTGSN LSPAFYLIAVAALAMAGGMALPETSKISLHDVPVTGEEPVVGSIA >Mature_444_residues TTTTVEQVDPATLKKVIVAAAIGNFVEWFDFAVYGFLATTIALQFFPSGDSSAALLKTFAVFAVAFAFRPLGGIFFGMLG DRIGRKKTLAMTILLMAGATTLIGLLPTYAAIGVMAPVLLTIIRCAQGFSAGGEYAGACAYLMEHAPRTQRAWYGSFVPV STFSAFAAAAVVAYALESLLSTEAMGNWGWRLPFLIAAPLGLVGLYLRWKLDETPAFQAVAQEHAVAHSPLKDTLRHHAA AMCCLGAFVSLTALSFYMFTTYFATYLQVAGGLSRATALLVSLIALAFAAALCPLAGAYSDRVGRRVTMATACILLMVVV VPSFLMASSGSFIASIIGVMLLAVGAVLCGVVTAALLSETFPTRTRYTASAITYNMAYTLFGGTAPLMATWLISMTGSNL SPAFYLIAVAALAMAGGMALPETSKISLHDVPVTGEEPVVGSIA
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=454, Percent_Identity=36.3436123348018, Blast_Score=295, Evalue=3e-81, Organism=Escherichia coli, GI1789941, Length=440, Percent_Identity=36.5909090909091, Blast_Score=209, Evalue=3e-55, Organism=Escherichia coli, GI1788292, Length=402, Percent_Identity=33.0845771144279, Blast_Score=200, Evalue=2e-52, Organism=Escherichia coli, GI1788942, Length=410, Percent_Identity=35.3658536585366, Blast_Score=199, Evalue=2e-52, Organism=Escherichia coli, GI87082404, Length=429, Percent_Identity=25.1748251748252, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87082231, Length=214, Percent_Identity=27.5700934579439, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 46695; Mature: 46563
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTTVEQVDPATLKKVIVAAAIGNFVEWFDFAVYGFLATTIALQFFPSGDSSAALLKTF CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AVFAVAFAFRPLGGIFFGMLGDRIGRKKTLAMTILLMAGATTLIGLLPTYAAIGVMAPVL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTIIRCAQGFSAGGEYAGACAYLMEHAPRTQRAWYGSFVPVSTFSAFAAAAVVAYALESL HHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LSTEAMGNWGWRLPFLIAAPLGLVGLYLRWKLDETPAFQAVAQEHAVAHSPLKDTLRHHA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCHHHHHHHHH AAMCCLGAFVSLTALSFYMFTTYFATYLQVAGGLSRATALLVSLIALAFAAALCPLAGAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SDRVGRRVTMATACILLMVVVVPSFLMASSGSFIASIIGVMLLAVGAVLCGVVTAALLSE HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFPTRTRYTASAITYNMAYTLFGGTAPLMATWLISMTGSNLSPAFYLIAVAALAMAGGMA CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC LPETSKISLHDVPVTGEEPVVGSIA CCCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure TTTTVEQVDPATLKKVIVAAAIGNFVEWFDFAVYGFLATTIALQFFPSGDSSAALLKTF CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AVFAVAFAFRPLGGIFFGMLGDRIGRKKTLAMTILLMAGATTLIGLLPTYAAIGVMAPVL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTIIRCAQGFSAGGEYAGACAYLMEHAPRTQRAWYGSFVPVSTFSAFAAAAVVAYALESL HHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LSTEAMGNWGWRLPFLIAAPLGLVGLYLRWKLDETPAFQAVAQEHAVAHSPLKDTLRHHA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCHHHHHHHHH AAMCCLGAFVSLTALSFYMFTTYFATYLQVAGGLSRATALLVSLIALAFAAALCPLAGAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SDRVGRRVTMATACILLMVVVVPSFLMASSGSFIASIIGVMLLAVGAVLCGVVTAALLSE HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFPTRTRYTASAITYNMAYTLFGGTAPLMATWLISMTGSNLSPAFYLIAVAALAMAGGMA CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC LPETSKISLHDVPVTGEEPVVGSIA CCCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]