| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is fsr [H]
Identifier: 66044926
GI number: 66044926
Start: 1888864
End: 1890072
Strand: Direct
Name: fsr [H]
Synonym: Psyr_1681
Alternate gene names: 66044926
Gene position: 1888864-1890072 (Clockwise)
Preceding gene: 66044922
Following gene: 66044927
Centisome position: 31.0
GC content: 61.46
Gene sequence:
>1209_bases ATGGCGACCAGTGCTCCGCCCGCGACGGCGAAGGCCTCGACCACCCCTCAAGCCAGCCCGCTGGTGATGCGCATCATCGG TGCTGTTGCCCTCGCGCACCTGGTCAACGACCTGATTCAAGCCATCCTCCCGTCGATCTACCCGATGCTCAAGGCCAGCT ACGACCTGAGCTTCACCCAGATCGGCCTGATTACCCTGACATTTCAGATCACAGCCTCGCTGCTGCAGCCCTGGGTCGGT TATTACACTGACCGCCATCCCAACCCGCTGGTACTGCCCGTCGGATCGATCTGCACGCTGATCGGCATCGTCATGATGTC GATGGTCGGCAGTTTCCCCTTGATCCTGCTGGCCGCCGCGCTGATCGGCATCGGCTCGTCAACGTTCCACCCGGAAGCCT CGCGTATCGCGCGGCTGGCCTCCGGTGGTCGTTACGGGCTCGCGCAATCGACCTTTCAGGTCGGCGGCAACACAGGCACG GCATTCGGACCGTTGCTGGCGGCGGCGATCATCATCCCGTTCGGCCAGGGCAATGTCGCCTGGATCGGCCTGTTTGCGTT GTTCTCGCTGGGGCTGCTGTATGCGATCAGCCGCTGGTATCGCACGCACCTCAACCTGTTCAAGCTCAAGGCCGGTCAGG CAGCCACTCATGGTCTGTCCAGAAAACGCGTGATTGCCTCGTTGGCAGTGCTGGCGTTCCTGGTGTTTTCCAAGTTCTTC TACATGACCAGCCTGACCAGCTATTTCACCTTCTACCTGATCGAGAAATTTGGTCTGTCGGTCGCCAGCTCGCAGTTGCA CCTGTTCCTGTTTCTGGGCGCCGTGGCGGCGGGGACCTTTTTCGGCGGGCCGATCGGTGACCGCATTGGCCGCAAGGCGG TGATCTGGTTCTCGATTCTTGGTGCCGCGCCGTTCACCCTGGCGCTGCCCTATGCGGATCTGTTCTGGACCAGCGTACTC AGTGTGATCATTGGCTTCGTCCTGGCCTCGGCGTTTTCCGCCATCGTGGTCTACGCCCAGGAGCTGGTGCCTGGCAACGT GGGCATGATCGCCGGGCTGTTCTTCGGCCTGATGTTCGGCTTCGGCGGCATTGGCGCTGCCTTGCTCGGTTATCTGGCTG ACAGCCACGGCATCCTGTTCGTCTACACGCTGTGCTCGTACCTGCCGCTGCTCGGTATCCTCGCGATTCTTCTGCCTCGG ACCAAATAA
Upstream 100 bases:
>100_bases TCGCCCCGAAAAATGGCACATTGGCGCGCCCCGGTACGCGTGACACATCTTGTAATCATTCGTACCGGGCGGCCCGCGAA CCCTTTTACGGATAAATACC
Downstream 100 bases:
>100_bases TGCTGATAGCAACGCTGATTTTCCTGTTCACCATCACGCTGGTCATCTGGCAACCCAAGGGCCTGGGCGTAGGCTGGAGT GCCGTATTGGGGGCAATTCT
Product: major facilitator transporter
Products: fosmidomycin [Periplasm]; Proton [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MATSAPPATAKASTTPQASPLVMRIIGAVALAHLVNDLIQAILPSIYPMLKASYDLSFTQIGLITLTFQITASLLQPWVG YYTDRHPNPLVLPVGSICTLIGIVMMSMVGSFPLILLAAALIGIGSSTFHPEASRIARLASGGRYGLAQSTFQVGGNTGT AFGPLLAAAIIIPFGQGNVAWIGLFALFSLGLLYAISRWYRTHLNLFKLKAGQAATHGLSRKRVIASLAVLAFLVFSKFF YMTSLTSYFTFYLIEKFGLSVASSQLHLFLFLGAVAAGTFFGGPIGDRIGRKAVIWFSILGAAPFTLALPYADLFWTSVL SVIIGFVLASAFSAIVVYAQELVPGNVGMIAGLFFGLMFGFGGIGAALLGYLADSHGILFVYTLCSYLPLLGILAILLPR TK
Sequences:
>Translated_402_residues MATSAPPATAKASTTPQASPLVMRIIGAVALAHLVNDLIQAILPSIYPMLKASYDLSFTQIGLITLTFQITASLLQPWVG YYTDRHPNPLVLPVGSICTLIGIVMMSMVGSFPLILLAAALIGIGSSTFHPEASRIARLASGGRYGLAQSTFQVGGNTGT AFGPLLAAAIIIPFGQGNVAWIGLFALFSLGLLYAISRWYRTHLNLFKLKAGQAATHGLSRKRVIASLAVLAFLVFSKFF YMTSLTSYFTFYLIEKFGLSVASSQLHLFLFLGAVAAGTFFGGPIGDRIGRKAVIWFSILGAAPFTLALPYADLFWTSVL SVIIGFVLASAFSAIVVYAQELVPGNVGMIAGLFFGLMFGFGGIGAALLGYLADSHGILFVYTLCSYLPLLGILAILLPR TK >Mature_401_residues ATSAPPATAKASTTPQASPLVMRIIGAVALAHLVNDLIQAILPSIYPMLKASYDLSFTQIGLITLTFQITASLLQPWVGY YTDRHPNPLVLPVGSICTLIGIVMMSMVGSFPLILLAAALIGIGSSTFHPEASRIARLASGGRYGLAQSTFQVGGNTGTA FGPLLAAAIIIPFGQGNVAWIGLFALFSLGLLYAISRWYRTHLNLFKLKAGQAATHGLSRKRVIASLAVLAFLVFSKFFY MTSLTSYFTFYLIEKFGLSVASSQLHLFLFLGAVAAGTFFGGPIGDRIGRKAVIWFSILGAAPFTLALPYADLFWTSVLS VIIGFVLASAFSAIVVYAQELVPGNVGMIAGLFFGLMFGFGGIGAALLGYLADSHGILFVYTLCSYLPLLGILAILLPRT K
Specific function: Confers the resistance against fosmidomycin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786686, Length=397, Percent_Identity=58.6901763224181, Blast_Score=440, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42684; Mature: 42553
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSAPPATAKASTTPQASPLVMRIIGAVALAHLVNDLIQAILPSIYPMLKASYDLSFTQ CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH IGLITLTFQITASLLQPWVGYYTDRHPNPLVLPVGSICTLIGIVMMSMVGSFPLILLAAA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHH LIGIGSSTFHPEASRIARLASGGRYGLAQSTFQVGGNTGTAFGPLLAAAIIIPFGQGNVA HHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHH WIGLFALFSLGLLYAISRWYRTHLNLFKLKAGQAATHGLSRKRVIASLAVLAFLVFSKFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH YMTSLTSYFTFYLIEKFGLSVASSQLHLFLFLGAVAAGTFFGGPIGDRIGRKAVIWFSIL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH GAAPFTLALPYADLFWTSVLSVIIGFVLASAFSAIVVYAQELVPGNVGMIAGLFFGLMFG HCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FGGIGAALLGYLADSHGILFVYTLCSYLPLLGILAILLPRTK HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ATSAPPATAKASTTPQASPLVMRIIGAVALAHLVNDLIQAILPSIYPMLKASYDLSFTQ CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH IGLITLTFQITASLLQPWVGYYTDRHPNPLVLPVGSICTLIGIVMMSMVGSFPLILLAAA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHH LIGIGSSTFHPEASRIARLASGGRYGLAQSTFQVGGNTGTAFGPLLAAAIIIPFGQGNVA HHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHH WIGLFALFSLGLLYAISRWYRTHLNLFKLKAGQAATHGLSRKRVIASLAVLAFLVFSKFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH YMTSLTSYFTFYLIEKFGLSVASSQLHLFLFLGAVAAGTFFGGPIGDRIGRKAVIWFSIL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH GAAPFTLALPYADLFWTSVLSVIIGFVLASAFSAIVVYAQELVPGNVGMIAGLFFGLMFG HCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FGGIGAALLGYLADSHGILFVYTLCSYLPLLGILAILLPRTK HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: fosmidomycin [Cytoplasm]; Proton [Periplasm] [C]
Specific reaction: fosmidomycin [Cytoplasm] + Proton [Periplasm] = fosmidomycin [Periplasm] + Proton [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8917080; 9278503 [H]