Click here to switch to the map view.

The map label for this gene is dcyD [C]

Identifier: 66044921

GI number: 66044921

Start: 1884592

End: 1885536

Strand: Direct

Name: dcyD [C]

Synonym: Psyr_1676

Alternate gene names: 66044921

Gene position: 1884592-1885536 (Clockwise)

Preceding gene: 66044920

Following gene: 66044922

Centisome position: 30.93

GC content: 65.71

Gene sequence:

>945_bases
ATGATGCTCGACGCCCTCGGCTGGCAACCCACTGCTCCCCTGGAACGCTTGAACCTGCCCTGGCTGCAAGACACCGGGGT
CGAGGTTGCGATCCTGCGCCTGGACCTTATCGACGCGCTGATCAGCGGTAACAAATGGTTCAAGCTCAGCGAGCACCTCA
GTCTGGCTGTTGATTCGGGTGCCGAGGGGTTGATCAGCCTCGGCGGCGCACATTCCAATCATCTGCATGCCCTGGCCGCT
GCAGGCAAACGCTTCGGTTTCCCGACGGTCGGCCTGTTGCGCGGTCATACCCAGCAGACGCCAACGGTGCTCGATCTGCA
GGCTTTCGGCATGCAACTGCACTGGCTGGGTTATGCCGGCTATCGTGAGCGGCATGCTGCGGGCTTCTGGTCGCCGTGGC
AGGCCCGCTATCCCGGTCTTTATCCGATTGCCGAAGGCGGTGGCGGGCTTGCCGGTGCATTGGGTTGCGGTCGGTTGCGG
GCAATGCTCGACGCGCAGCTCGGGCACCTGGGCTGGGACGATTACCACGGATGGTGGTTGGCGGCAGGCACCGGCACCAC
GCTGGCCGGCTTGCTGTTGGCAGAGGCGGGCGCCCGGCCGGTGTATGGGGCGATGGCTGTGCCCGAGGATCACGGGGTCG
CGCAAAACATCATCGCGGTGCTGAATGAGGCGGCCGGTGCGCAAACCGATGTCGCGCCGCGCCTGCCACCCACTTGTATT
CTGCTCGATGCCAGCCGCGGCGGTTTCGCCAGAACCGACGCGGCGCTGCTCGGTTTCATTGCCGACAGCGAGGCACAGAG
CGGTGTACCTCTGGAGCCGCTGTACACCGGCAAGGCGTTGCTGGCCCTGCATGATGAAGTGCTGGCCGGTCGTTTCGCGC
CCGGCACCCGGCTGGTCTTCGTCCACACCGGCGGCCTTCAGGGGCGGCGTGCGATGGGCCTGTAA

Upstream 100 bases:

>100_bases
GGCCGCCACTCTGTGACAGACAATGCCTGATCAAGGGTTTTGCAACGCAGCCTGCTGACCGGCGAAGACCCTGAAACGGC
TTGTCTGTAAACTGCGGCGC

Downstream 100 bases:

>100_bases
GCCACGTGGCAGAGCCTTTGGCATGAATTCTGCGCAGAACGATGCGAGACGTCGGCCCTGACTACGTGGATGACACTTCT
GGAGAGGGGCATCCGGGTCG

Product: 1-aminocyclopropane-1-carboxylate deaminase, putative

Products: NA

Alternate protein names: ACC deaminase [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MMLDALGWQPTAPLERLNLPWLQDTGVEVAILRLDLIDALISGNKWFKLSEHLSLAVDSGAEGLISLGGAHSNHLHALAA
AGKRFGFPTVGLLRGHTQQTPTVLDLQAFGMQLHWLGYAGYRERHAAGFWSPWQARYPGLYPIAEGGGGLAGALGCGRLR
AMLDAQLGHLGWDDYHGWWLAAGTGTTLAGLLLAEAGARPVYGAMAVPEDHGVAQNIIAVLNEAAGAQTDVAPRLPPTCI
LLDASRGGFARTDAALLGFIADSEAQSGVPLEPLYTGKALLALHDEVLAGRFAPGTRLVFVHTGGLQGRRAMGL

Sequences:

>Translated_314_residues
MMLDALGWQPTAPLERLNLPWLQDTGVEVAILRLDLIDALISGNKWFKLSEHLSLAVDSGAEGLISLGGAHSNHLHALAA
AGKRFGFPTVGLLRGHTQQTPTVLDLQAFGMQLHWLGYAGYRERHAAGFWSPWQARYPGLYPIAEGGGGLAGALGCGRLR
AMLDAQLGHLGWDDYHGWWLAAGTGTTLAGLLLAEAGARPVYGAMAVPEDHGVAQNIIAVLNEAAGAQTDVAPRLPPTCI
LLDASRGGFARTDAALLGFIADSEAQSGVPLEPLYTGKALLALHDEVLAGRFAPGTRLVFVHTGGLQGRRAMGL
>Mature_314_residues
MMLDALGWQPTAPLERLNLPWLQDTGVEVAILRLDLIDALISGNKWFKLSEHLSLAVDSGAEGLISLGGAHSNHLHALAA
AGKRFGFPTVGLLRGHTQQTPTVLDLQAFGMQLHWLGYAGYRERHAAGFWSPWQARYPGLYPIAEGGGGLAGALGCGRLR
AMLDAQLGHLGWDDYHGWWLAAGTGTTLAGLLLAEAGARPVYGAMAVPEDHGVAQNIIAVLNEAAGAQTDVAPRLPPTCI
LLDASRGGFARTDAALLGFIADSEAQSGVPLEPLYTGKALLALHDEVLAGRFAPGTRLVFVHTGGLQGRRAMGL

Specific function: Catalyzes The Alpha,Beta-Elimination Reaction Of D-Cysteine And Of Several D-Cysteine Derivatives. It Could Be A Defense Mechanism Against D-Cysteine. Can Also Catalyze The Degradation Of 3-Chloro-D-Alanine. [C]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =3.5.99.7 [H]

Molecular weight: Translated: 33137; Mature: 33137

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLDALGWQPTAPLERLNLPWLQDTGVEVAILRLDLIDALISGNKWFKLSEHLSLAVDSG
CCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEHHHHHHHHHCCCCEEEECCCEEEEECCC
AEGLISLGGAHSNHLHALAAAGKRFGFPTVGLLRGHTQQTPTVLDLQAFGMQLHWLGYAG
CCCEEEECCCCCCHHHHHHHCCHHCCCCCHHHHCCCCCCCCEEEEHHHHCEEEEEEEECC
YRERHAAGFWSPWQARYPGLYPIAEGGGGLAGALGCGRLRAMLDAQLGHLGWDDYHGWWL
CHHHHCCCCCCCCCCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
AAGTGTTLAGLLLAEAGARPVYGAMAVPEDHGVAQNIIAVLNEAAGAQTDVAPRLPPTCI
EECCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEE
LLDASRGGFARTDAALLGFIADSEAQSGVPLEPLYTGKALLALHDEVLAGRFAPGTRLVF
EEECCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCCEEEE
VHTGGLQGRRAMGL
EECCCCCCCCCCCC
>Mature Secondary Structure
MMLDALGWQPTAPLERLNLPWLQDTGVEVAILRLDLIDALISGNKWFKLSEHLSLAVDSG
CCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEHHHHHHHHHCCCCEEEECCCEEEEECCC
AEGLISLGGAHSNHLHALAAAGKRFGFPTVGLLRGHTQQTPTVLDLQAFGMQLHWLGYAG
CCCEEEECCCCCCHHHHHHHCCHHCCCCCHHHHCCCCCCCCEEEEHHHHCEEEEEEEECC
YRERHAAGFWSPWQARYPGLYPIAEGGGGLAGALGCGRLRAMLDAQLGHLGWDDYHGWWL
CHHHHCCCCCCCCCCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
AAGTGTTLAGLLLAEAGARPVYGAMAVPEDHGVAQNIIAVLNEAAGAQTDVAPRLPPTCI
EECCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEE
LLDASRGGFARTDAALLGFIADSEAQSGVPLEPLYTGKALLALHDEVLAGRFAPGTRLVF
EEECCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCCEEEE
VHTGGLQGRRAMGL
EECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]