| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044906
Identifier: 66044906
GI number: 66044906
Start: 1864113
End: 1866959
Strand: Direct
Name: 66044906
Synonym: Psyr_1661
Alternate gene names: NA
Gene position: 1864113-1866959 (Clockwise)
Preceding gene: 66044905
Following gene: 66044907
Centisome position: 30.59
GC content: 62.0
Gene sequence:
>2847_bases ATGGTTCAGGTTCGTAAACTGGTATTAGCAATCGCTGCGGCATCAGCGCTGTCATCGGGTATGGCGCAGGCGCTGGGGCT CGGGGAATTGTCGGTCAAGTCGACCCTGAATCAGCCATTGGTAGCGGAAATCGAGTTGACCGAAGCTCAGGGGCTCAACG CAACGCAAGTTGTGCCCAGCCTGGCCACCACGGCCGACTTCGCGCAGGCGGGTGTGACCCGTCAGGCATTTCTCAACGAT CTCACCTTTACCCCGGTTATCAATGCCAGCGGTAAAAGTGTCCTGCGCATTACATCCAGCAAGCCGGTGCGCGAGCCTTA TGTGAAGTTTCTGGTTCAGGTGCTCTGGCCCAATGGCCGGTTGCTGCGTGAATACAGCCTTCTGCTCGATCCGCCGAAAT TCTCTCCCGAGGCAGCCGCTGCGGCCGCTGCCCCGGCCCCCGCTGCCGCGCCCGCCGCGCCTGCGCAACTGGCAACAGTA GCCCCTTCGGCAGAAGCGCCGGCAGCCGAGGCACCAGCACCAGCACCGGCTGCCAACCCAGCCGCAGTGCCGCCGCCAGC CGCCGACAAGCAGTCACAGTACGTCACCGCCAATAACGACACCTTGTGGGAAATCGCTGCCAAGGTGCGTACTGGCGGGA CTGTCCAGCAAACCATGCTGGCGATTCAGGCGTTGAACCCGGATGCGTTCATTGGTGGCAACATCAACCGCCTGAAGAAA GGGCAGGTGCTGCGCCTTCCAACGCCGCAACAGACCACCGCGCTGCCGCAATCACAGGCAGTGGCAGAAGTTTCCCGCCA ATACAGCGCCTGGCGTGAAGGTCGCCGTCTGCCGGCCGGTACCCGTCAGGTCGATGCTACCCGTCGTGACCGTGCGGGCG CGGCGCCTTCCAAAGTTGATACCTCCGACAACCTCAGCCTGGTGTCGGCAAGCGGCAAGCCTGCGGCGAAAGGTGCGGCG GGCGACGGTGACCTTGGCAACAAGCTGGCCGTGGCTCAGGAAGCGCTGGATACCACACGTCGCGACAATGCCGAGCTGAA AAGCCGCATGAACGACCTGCAAAGCCAGCTCGACAAGTTGCAGCGTCTGGTCGAGTTGAAAAACGGTCAGTTGGCCAAGA TGCAGGCCGCTGGCGCAGCCGTGCCGCCTCCTGCCGCCACTCCTGATGCCGCGACGCCTGCCAATGCGGCAGTGCCTGCC TCGCTGGTCGACGCCAACGGTGCGCCGGTCAAACCGGCTGGCGAGATCGCGCCTGAAGATGCGCTGCCTGCCGGTGCTGC CGAAGTTGCGACGCCGGCGCCAGAGCAGCCGCTGGCGGTGGAGCCGGTTGCTGCAGCAGACGAGGACGAGGATGCGCTGC AGAAAATCATCAACAACCCTGTGCTGCTTGGCCTGATCGGCGGTGCGGTGTTGCTGATTCTGGCCTTGCTGCTGTTGTTT CTGGCGCGTCGTCGCGCGGCGAAGGCCGAGGCCGAGAAGCACAAGCGCATGGCGCGTGCGCTGGCCGAGGAGTCGGATTT CGTCTCTGACATGGACATGAATGCACCGCCCGCCAGCTTCGACGGGCTTGATGTGCCGCCGCCCAACGTGCGTATGGGCG GCGCCGCAGCCGCCGCTGCCGGTCGCGAACGTCCTGCCGATCCGCTGGTTCAGGCCGAGATCCATATCGCTTACGGTCGT ATGAATCAGGCGATTGAGTTGCTGGAAGAAGCCGTCAACGAAGACCCCAAGCGCGACGATATCCGTCTGAAACTGATGGA AATCTACGCCGAGCAGGGTAACAACAAAGCCTATGCCGCCCACGAACGTAAACTGGTGGCTGCGGGAAAGCTTGAAGCTG AGGTCGAGCAGCGGGAAGAACTTAACTCGACCCTGAAGCCGGTGGCACCTGTTGCTGCGCCGCTGGCTTCTGAAGCCTCA TCGGCTGCTCCTGCCGTCGCTGCAGCCGCCGCGGCGGCTACAACAGCCGCACTGGTTGCAGAGCTTGATGCCAAATATCT CGAAGAACTGCTGGCCGATGATGCGGCAGAGCAGGATGCCGAGCCTGAGCCTGAGCCTGAGCCTGAGCCCGAGCCCGAAA TTGTTGCTACACCTGAACCTGAGCCGGCAGTAGTCGCGCCGCTGGCCGCAGAGCCTGTTGAAGAGGCAGACCCGTTCGAT AACGATTTTGACTTGAGCCTGGACGAGTTCGAAGAACCGTCTGTGCCTGAAGTCTCTACTGTGAATGACATCGATGACCT GATGCTCGACGAGCCCAAGGTATCAGCGGTAGCGGATGACGAAGCGCTGAGCTTCGAGTCGGTCATGCAGCAGCAGGAAG AGGCCCGTGCAGCGACAACGCCGCAAGACCTTGCCGACTTCGACCTCGATCTGTCCGAGGAAGACCCGGCCCTCAAGAGC GAAGATGATTTCCTGCTCGGTCTTGGCGAGGATCCACTGGATTTGGGTGAAACCTCGCCTGTACCGCCGGTCAGTGATGA CCTGGAGCTTCCAGAGGATTTCGACCTGTCGCTGGCGGACGAGATTGAGACCGATCAGGCAAGTCAGGCGTTCGCGACTG AAATCGATGACGTCAATGCCGAGCTTGAGCGTCTTTCGCAGAATCTTGAGCATCCGCCGCTCGATGAGCCGAGATTCACT GCCGAGGATGCGGCAGCGCTGGATGACGAGCCGGACTTCGACTTCATGGCCGGTACTGACGAAGCGGCGACCAAACTCGA TCTGGCGCGTGCCTACATCGACATGGGCGATGCGGACGGCGCTCGGGATATTCTTGATGAGGTCGTCACCGAGGGCGATG ACGGTCAGAAAAGCGAAGCGCGGGAGATGCTTTCGCGGCTGGCCTGA
Upstream 100 bases:
>100_bases GGCAACAATTTGAATAATTGTTTTAGCGGCGATACGCCTTACACCCAAATGCAGGACTACCTCCCCGGATCTCGGGGAAT CTTTAAACAAGGGATGGGCT
Downstream 100 bases:
>100_bases TTCAACCCCGGCAACCTTCACACGGCCGCTTATGCGGCCGTTTGCATTTCAGATGTCCCGCTTGAGTAGCGTGTTTTTTT TGCGGCCGTATAATGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Tfp Pilus Assembly Protein FimV-Like Protein; FimV N-Terminal Domain Protein; LysM Domain Protein; Motility Protein FimV; LysM Domain-Containing Protein; TPR Repeat-Containing Protein; FimV C-Terminal Domain-Containing Protein; Protein Containing Tetratricopeptide Repeats; Tfp Pilus Assembly Protein FimV-Like; Transmembrane Tfp Pilus Assembly Protein FimV; FimV N-Terminal Domain; FimV N-Terminal Domain-Containing Protein; FimV Type IV Pilus Assembly Protein
Number of amino acids: Translated: 948; Mature: 948
Protein sequence:
>948_residues MVQVRKLVLAIAAASALSSGMAQALGLGELSVKSTLNQPLVAEIELTEAQGLNATQVVPSLATTADFAQAGVTRQAFLND LTFTPVINASGKSVLRITSSKPVREPYVKFLVQVLWPNGRLLREYSLLLDPPKFSPEAAAAAAAPAPAAAPAAPAQLATV APSAEAPAAEAPAPAPAANPAAVPPPAADKQSQYVTANNDTLWEIAAKVRTGGTVQQTMLAIQALNPDAFIGGNINRLKK GQVLRLPTPQQTTALPQSQAVAEVSRQYSAWREGRRLPAGTRQVDATRRDRAGAAPSKVDTSDNLSLVSASGKPAAKGAA GDGDLGNKLAVAQEALDTTRRDNAELKSRMNDLQSQLDKLQRLVELKNGQLAKMQAAGAAVPPPAATPDAATPANAAVPA SLVDANGAPVKPAGEIAPEDALPAGAAEVATPAPEQPLAVEPVAAADEDEDALQKIINNPVLLGLIGGAVLLILALLLLF LARRRAAKAEAEKHKRMARALAEESDFVSDMDMNAPPASFDGLDVPPPNVRMGGAAAAAAGRERPADPLVQAEIHIAYGR MNQAIELLEEAVNEDPKRDDIRLKLMEIYAEQGNNKAYAAHERKLVAAGKLEAEVEQREELNSTLKPVAPVAAPLASEAS SAAPAVAAAAAAATTAALVAELDAKYLEELLADDAAEQDAEPEPEPEPEPEPEIVATPEPEPAVVAPLAAEPVEEADPFD NDFDLSLDEFEEPSVPEVSTVNDIDDLMLDEPKVSAVADDEALSFESVMQQQEEARAATTPQDLADFDLDLSEEDPALKS EDDFLLGLGEDPLDLGETSPVPPVSDDLELPEDFDLSLADEIETDQASQAFATEIDDVNAELERLSQNLEHPPLDEPRFT AEDAAALDDEPDFDFMAGTDEAATKLDLARAYIDMGDADGARDILDEVVTEGDDGQKSEAREMLSRLA
Sequences:
>Translated_948_residues MVQVRKLVLAIAAASALSSGMAQALGLGELSVKSTLNQPLVAEIELTEAQGLNATQVVPSLATTADFAQAGVTRQAFLND LTFTPVINASGKSVLRITSSKPVREPYVKFLVQVLWPNGRLLREYSLLLDPPKFSPEAAAAAAAPAPAAAPAAPAQLATV APSAEAPAAEAPAPAPAANPAAVPPPAADKQSQYVTANNDTLWEIAAKVRTGGTVQQTMLAIQALNPDAFIGGNINRLKK GQVLRLPTPQQTTALPQSQAVAEVSRQYSAWREGRRLPAGTRQVDATRRDRAGAAPSKVDTSDNLSLVSASGKPAAKGAA GDGDLGNKLAVAQEALDTTRRDNAELKSRMNDLQSQLDKLQRLVELKNGQLAKMQAAGAAVPPPAATPDAATPANAAVPA SLVDANGAPVKPAGEIAPEDALPAGAAEVATPAPEQPLAVEPVAAADEDEDALQKIINNPVLLGLIGGAVLLILALLLLF LARRRAAKAEAEKHKRMARALAEESDFVSDMDMNAPPASFDGLDVPPPNVRMGGAAAAAAGRERPADPLVQAEIHIAYGR MNQAIELLEEAVNEDPKRDDIRLKLMEIYAEQGNNKAYAAHERKLVAAGKLEAEVEQREELNSTLKPVAPVAAPLASEAS SAAPAVAAAAAAATTAALVAELDAKYLEELLADDAAEQDAEPEPEPEPEPEPEIVATPEPEPAVVAPLAAEPVEEADPFD NDFDLSLDEFEEPSVPEVSTVNDIDDLMLDEPKVSAVADDEALSFESVMQQQEEARAATTPQDLADFDLDLSEEDPALKS EDDFLLGLGEDPLDLGETSPVPPVSDDLELPEDFDLSLADEIETDQASQAFATEIDDVNAELERLSQNLEHPPLDEPRFT AEDAAALDDEPDFDFMAGTDEAATKLDLARAYIDMGDADGARDILDEVVTEGDDGQKSEAREMLSRLA >Mature_948_residues MVQVRKLVLAIAAASALSSGMAQALGLGELSVKSTLNQPLVAEIELTEAQGLNATQVVPSLATTADFAQAGVTRQAFLND LTFTPVINASGKSVLRITSSKPVREPYVKFLVQVLWPNGRLLREYSLLLDPPKFSPEAAAAAAAPAPAAAPAAPAQLATV APSAEAPAAEAPAPAPAANPAAVPPPAADKQSQYVTANNDTLWEIAAKVRTGGTVQQTMLAIQALNPDAFIGGNINRLKK GQVLRLPTPQQTTALPQSQAVAEVSRQYSAWREGRRLPAGTRQVDATRRDRAGAAPSKVDTSDNLSLVSASGKPAAKGAA GDGDLGNKLAVAQEALDTTRRDNAELKSRMNDLQSQLDKLQRLVELKNGQLAKMQAAGAAVPPPAATPDAATPANAAVPA SLVDANGAPVKPAGEIAPEDALPAGAAEVATPAPEQPLAVEPVAAADEDEDALQKIINNPVLLGLIGGAVLLILALLLLF LARRRAAKAEAEKHKRMARALAEESDFVSDMDMNAPPASFDGLDVPPPNVRMGGAAAAAAGRERPADPLVQAEIHIAYGR MNQAIELLEEAVNEDPKRDDIRLKLMEIYAEQGNNKAYAAHERKLVAAGKLEAEVEQREELNSTLKPVAPVAAPLASEAS SAAPAVAAAAAAATTAALVAELDAKYLEELLADDAAEQDAEPEPEPEPEPEPEIVATPEPEPAVVAPLAAEPVEEADPFD NDFDLSLDEFEEPSVPEVSTVNDIDDLMLDEPKVSAVADDEALSFESVMQQQEEARAATTPQDLADFDLDLSEEDPALKS EDDFLLGLGEDPLDLGETSPVPPVSDDLELPEDFDLSLADEIETDQASQAFATEIDDVNAELERLSQNLEHPPLDEPRFT AEDAAALDDEPDFDFMAGTDEAATKLDLARAYIDMGDADGARDILDEVVTEGDDGQKSEAREMLSRLA
Specific function: Unknown
COG id: COG3170
COG function: function code NU; Tfp pilus assembly protein FimV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99535; Mature: 99535
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQVRKLVLAIAAASALSSGMAQALGLGELSVKSTLNQPLVAEIELTEAQGLNATQVVPS CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHH LATTADFAQAGVTRQAFLNDLTFTPVINASGKSVLRITSSKPVREPYVKFLVQVLWPNGR HHHHHHHHHHCCHHHHHHHCCCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC LLREYSLLLDPPKFSPEAAAAAAAPAPAAAPAAPAQLATVAPSAEAPAAEAPAPAPAANP EEHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC AAVPPPAADKQSQYVTANNDTLWEIAAKVRTGGTVQQTMLAIQALNPDAFIGGNINRLKK CCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCHHHHCC GQVLRLPTPQQTTALPQSQAVAEVSRQYSAWREGRRLPAGTRQVDATRRDRAGAAPSKVD CCEEECCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCC TSDNLSLVSASGKPAAKGAAGDGDLGNKLAVAQEALDTTRRDNAELKSRMNDLQSQLDKL CCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH QRLVELKNGQLAKMQAAGAAVPPPAATPDAATPANAAVPASLVDANGAPVKPAGEIAPED HHHHHHCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC ALPAGAAEVATPAPEQPLAVEPVAAADEDEDALQKIINNPVLLGLIGGAVLLILALLLLF CCCCCCHHHCCCCCCCCCEECCCCCCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH LARRRAAKAEAEKHKRMARALAEESDFVSDMDMNAPPASFDGLDVPPPNVRMGGAAAAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC GRERPADPLVQAEIHIAYGRMNQAIELLEEAVNEDPKRDDIRLKLMEIYAEQGNNKAYAA CCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEH HERKLVAAGKLEAEVEQREELNSTLKPVAPVAAPLASEASSAAPAVAAAAAAATTAALVA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ELDAKYLEELLADDAAEQDAEPEPEPEPEPEPEIVATPEPEPAVVAPLAAEPVEEADPFD HHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCHHHCCCCC NDFDLSLDEFEEPSVPEVSTVNDIDDLMLDEPKVSAVADDEALSFESVMQQQEEARAATT CCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCC PQDLADFDLDLSEEDPALKSEDDFLLGLGEDPLDLGETSPVPPVSDDLELPEDFDLSLAD HHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH EIETDQASQAFATEIDDVNAELERLSQNLEHPPLDEPRFTAEDAAALDDEPDFDFMAGTD HHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC EAATKLDLARAYIDMGDADGARDILDEVVTEGDDGQKSEAREMLSRLA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MVQVRKLVLAIAAASALSSGMAQALGLGELSVKSTLNQPLVAEIELTEAQGLNATQVVPS CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHH LATTADFAQAGVTRQAFLNDLTFTPVINASGKSVLRITSSKPVREPYVKFLVQVLWPNGR HHHHHHHHHHCCHHHHHHHCCCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC LLREYSLLLDPPKFSPEAAAAAAAPAPAAAPAAPAQLATVAPSAEAPAAEAPAPAPAANP EEHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC AAVPPPAADKQSQYVTANNDTLWEIAAKVRTGGTVQQTMLAIQALNPDAFIGGNINRLKK CCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCHHHHCC GQVLRLPTPQQTTALPQSQAVAEVSRQYSAWREGRRLPAGTRQVDATRRDRAGAAPSKVD CCEEECCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCC TSDNLSLVSASGKPAAKGAAGDGDLGNKLAVAQEALDTTRRDNAELKSRMNDLQSQLDKL CCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH QRLVELKNGQLAKMQAAGAAVPPPAATPDAATPANAAVPASLVDANGAPVKPAGEIAPED HHHHHHCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC ALPAGAAEVATPAPEQPLAVEPVAAADEDEDALQKIINNPVLLGLIGGAVLLILALLLLF CCCCCCHHHCCCCCCCCCEECCCCCCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH LARRRAAKAEAEKHKRMARALAEESDFVSDMDMNAPPASFDGLDVPPPNVRMGGAAAAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC GRERPADPLVQAEIHIAYGRMNQAIELLEEAVNEDPKRDDIRLKLMEIYAEQGNNKAYAA CCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEH HERKLVAAGKLEAEVEQREELNSTLKPVAPVAAPLASEASSAAPAVAAAAAAATTAALVA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ELDAKYLEELLADDAAEQDAEPEPEPEPEPEPEIVATPEPEPAVVAPLAAEPVEEADPFD HHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCHHHCCCCC NDFDLSLDEFEEPSVPEVSTVNDIDDLMLDEPKVSAVADDEALSFESVMQQQEEARAATT CCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCC PQDLADFDLDLSEEDPALKSEDDFLLGLGEDPLDLGETSPVPPVSDDLELPEDFDLSLAD HHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH EIETDQASQAFATEIDDVNAELERLSQNLEHPPLDEPRFTAEDAAALDDEPDFDFMAGTD HHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC EAATKLDLARAYIDMGDADGARDILDEVVTEGDDGQKSEAREMLSRLA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA