| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044851
Identifier: 66044851
GI number: 66044851
Start: 1805073
End: 1806140
Strand: Reverse
Name: 66044851
Synonym: Psyr_1606
Alternate gene names: NA
Gene position: 1806140-1805073 (Counterclockwise)
Preceding gene: 66044854
Following gene: 66044850
Centisome position: 29.64
GC content: 57.4
Gene sequence:
>1068_bases ATGAAACATCTTTTGTTGGCATCACTCCTCGGTTCAGCCATGGCAATGAGTTCGCTGGTCATGGCGGCGGACACGGATCT TAAAACGCTGGAGGCTGCGGCCAAGGCTGAAGGCGCAGTCAACAGCCTCGGCATGCCGGATGACTGGGCAAACTGGGGCG GCATCTGGAAAGACCTGGAAGCCAAATACGGCCTCAAGCACATGGACACCGACATGAGTTCGGCCCAGGAGATCGCCAAG TTCGAAGCGGAGAAAGACAACGCCAGCGGTGACATTGGCGACGTAGGCGCAGCATTCGGCCCTATCGCCGCAGCAAAAGG CGTCACCCAGCCTTACAAGCCAACCACCTGGGAGCAGATCCCGACCTGGGCCAAGGACACGGACGGCCACTGGGCGCTGG CCTATACGGGCACCATTGCCTTCATCGTCAACAAAAACCTGCTGCACGGCTCTGATATCCCGAAAAGCTGGGCTGACCTG AAAACCGGCAAATACAAGGTTTCCATCGGCGATGTGAGCACTGCGGCTCAGGCTGCCAACGGTGTACTGGCAGCGGCCAT CGCCATGAAAGGTGACGAAAGCAACATCGCACCGGGCCTGGCACTGTTCACCGATCTGGCCAAACAGAAGCGTCTGTCGC TGGCCAACCCGACCATTCAGACCATCGAGAAAGGCGAAATCGAAGTCGGTGTGGTCTGGGACTTCAATGGCCTGAGCTAC AAAGCCAAGATGACCAAACCCGATGATTACGTCGTGCTGATCCCGTCGGACGGCTCGGTGATTTCCGGCTACACCACCAT CATCAACAAGTATGCCAAACACCCGAACGCCGCCAAGCTGGCGCGTGAGTACACCTTCAGCGACGCGGGTCAGATCAGGC TGGCAGAAGGCAATGCGCGCCCGATTCGCGTAGAGCACATCAAATTGCCTGAAGATGTTCAAGCCAAGTTGCTGCCGCAA GACCAGTACAAAAACGCCAAGCCGATCAAGAACGCAGACGCCTGGGAGAAAACCTCCAAAGCGCTGCCGCAGATGTGGAA CGAGCAGGTCATCATCGAGATGAACTGA
Upstream 100 bases:
>100_bases AAATGTCATGCAAAAAGCCTAACTTGGCTCAGGTATTGCTGATCTAGACCAAACAATCCGCAACGAACACTTCTTGCAAG AAGTGCACTAGGAGCTCCGA
Downstream 100 bases:
>100_bases TCCTCTCCTGCGGCTCAGGGATGAAGTCGTGTACACCGGGCGAGCCAGTCTCGCCCGTTCTTTCAAAGCGAGTTGCCCAT GAAACACAACGTCATCCTGA
Product: ABC transporter, periplasmic substrate-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MKHLLLASLLGSAMAMSSLVMAADTDLKTLEAAAKAEGAVNSLGMPDDWANWGGIWKDLEAKYGLKHMDTDMSSAQEIAK FEAEKDNASGDIGDVGAAFGPIAAAKGVTQPYKPTTWEQIPTWAKDTDGHWALAYTGTIAFIVNKNLLHGSDIPKSWADL KTGKYKVSIGDVSTAAQAANGVLAAAIAMKGDESNIAPGLALFTDLAKQKRLSLANPTIQTIEKGEIEVGVVWDFNGLSY KAKMTKPDDYVVLIPSDGSVISGYTTIINKYAKHPNAAKLAREYTFSDAGQIRLAEGNARPIRVEHIKLPEDVQAKLLPQ DQYKNAKPIKNADAWEKTSKALPQMWNEQVIIEMN
Sequences:
>Translated_355_residues MKHLLLASLLGSAMAMSSLVMAADTDLKTLEAAAKAEGAVNSLGMPDDWANWGGIWKDLEAKYGLKHMDTDMSSAQEIAK FEAEKDNASGDIGDVGAAFGPIAAAKGVTQPYKPTTWEQIPTWAKDTDGHWALAYTGTIAFIVNKNLLHGSDIPKSWADL KTGKYKVSIGDVSTAAQAANGVLAAAIAMKGDESNIAPGLALFTDLAKQKRLSLANPTIQTIEKGEIEVGVVWDFNGLSY KAKMTKPDDYVVLIPSDGSVISGYTTIINKYAKHPNAAKLAREYTFSDAGQIRLAEGNARPIRVEHIKLPEDVQAKLLPQ DQYKNAKPIKNADAWEKTSKALPQMWNEQVIIEMN >Mature_355_residues MKHLLLASLLGSAMAMSSLVMAADTDLKTLEAAAKAEGAVNSLGMPDDWANWGGIWKDLEAKYGLKHMDTDMSSAQEIAK FEAEKDNASGDIGDVGAAFGPIAAAKGVTQPYKPTTWEQIPTWAKDTDGHWALAYTGTIAFIVNKNLLHGSDIPKSWADL KTGKYKVSIGDVSTAAQAANGVLAAAIAMKGDESNIAPGLALFTDLAKQKRLSLANPTIQTIEKGEIEVGVVWDFNGLSY KAKMTKPDDYVVLIPSDGSVISGYTTIINKYAKHPNAAKLAREYTFSDAGQIRLAEGNARPIRVEHIKLPEDVQAKLLPQ DQYKNAKPIKNADAWEKTSKALPQMWNEQVIIEMN
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38345; Mature: 38345
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLLLASLLGSAMAMSSLVMAADTDLKTLEAAAKAEGAVNSLGMPDDWANWGGIWKDLE CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCCCCCCCHHHCCHHHHHH AKYGLKHMDTDMSSAQEIAKFEAEKDNASGDIGDVGAAFGPIAAAKGVTQPYKPTTWEQI HHCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHC PTWAKDTDGHWALAYTGTIAFIVNKNLLHGSDIPKSWADLKTGKYKVSIGDVSTAAQAAN CCCCCCCCCCEEEEEECEEEEEEECCCCCCCCCCCHHHHCCCCEEEEEECCHHHHHHHHC GVLAAAIAMKGDESNIAPGLALFTDLAKQKRLSLANPTIQTIEKGEIEVGVVWDFNGLSY CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEEECCCCEE KAKMTKPDDYVVLIPSDGSVISGYTTIINKYAKHPNAAKLAREYTFSDAGQIRLAEGNAR EEECCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCC PIRVEHIKLPEDVQAKLLPQDQYKNAKPIKNADAWEKTSKALPQMWNEQVIIEMN CEEEEEECCCCHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEC >Mature Secondary Structure MKHLLLASLLGSAMAMSSLVMAADTDLKTLEAAAKAEGAVNSLGMPDDWANWGGIWKDLE CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCCCCCCCHHHCCHHHHHH AKYGLKHMDTDMSSAQEIAKFEAEKDNASGDIGDVGAAFGPIAAAKGVTQPYKPTTWEQI HHCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHC PTWAKDTDGHWALAYTGTIAFIVNKNLLHGSDIPKSWADLKTGKYKVSIGDVSTAAQAAN CCCCCCCCCCEEEEEECEEEEEEECCCCCCCCCCCHHHHCCCCEEEEEECCHHHHHHHHC GVLAAAIAMKGDESNIAPGLALFTDLAKQKRLSLANPTIQTIEKGEIEVGVVWDFNGLSY CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEEECCCCEE KAKMTKPDDYVVLIPSDGSVISGYTTIINKYAKHPNAAKLAREYTFSDAGQIRLAEGNAR EEECCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCC PIRVEHIKLPEDVQAKLLPQDQYKNAKPIKNADAWEKTSKALPQMWNEQVIIEMN CEEEEEECCCCHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA