| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044850
Identifier: 66044850
GI number: 66044850
Start: 1804188
End: 1804994
Strand: Reverse
Name: 66044850
Synonym: Psyr_1605
Alternate gene names: NA
Gene position: 1804994-1804188 (Counterclockwise)
Preceding gene: 66044851
Following gene: 66044849
Centisome position: 29.62
GC content: 62.45
Gene sequence:
>807_bases ATGAAACACAACGTCATCCTGATCGTGCTGGACGGCCTCAATTACGAAGTCGCACGCCATGCGATGGGGCACCTGCAAGC CTGGCATGATGCAGGCAGGGCCGCGCTCTACAAGATCGAATGCGAACTGCCCGCCCTCTCCCGCCCCCTTTACGAATGCA TACTGACCGGCGTTGCGCCCATCGACAGCGGCATCGTGCATAACAACGTCTCACGCCTGTCGAATCAGCGCAGCATCTTT CACTATGCTCGCGACGCCGGACTGAGCACGGCAGCGGCGGCCTATCACTGGGTCAGCGAGCTGTACAACCGCACGCCGTT CGACCCGGCACGCGACCGCCACACCGAGGCAGCGGACCTGCCGATCCAGCACGGGCTGTTCTACTGGGCCGACCACTACC CTGATTCGCACCTGTTCGCCGACGCCGAAAGTCTGCGCCTCAGCCACGCCCCGAACTTTCTGCTGATCCACCCCATGAAC ATCGACGACGCCGGGCACAAGCACGGCCTCGACACTGCGCAGTACCGCAACAGCGCCCGCAGCGCCGACATCATTCTGGC TGACTATCTGCAACGCTGGCTGGATGCGGGGTATCAGGTGCTGGTAACCGCCGACCACGGCATGAACAACGACCGCTCGC ACAACGGGCTGTTGCCGGAAGAGCGTGAAGTACCGCTGTTCGTTATCGGCGATGCCTTCAGCCTGAATGTCGACGCCGCG CCGCGCCAGACCGATCTGTGCGGCACCGTTTGCGAGCTGCTGGGTATCCCTCACGACAAACCGGTCTGCCGGGAGATCTT CAATTGA
Upstream 100 bases:
>100_bases GGTCATCATCGAGATGAACTGATCCTCTCCTGCGGCTCAGGGATGAAGTCGTGTACACCGGGCGAGCCAGTCTCGCCCGT TCTTTCAAAGCGAGTTGCCC
Downstream 100 bases:
>100_bases CGACCTTTTCCCGAGGCAAGTGGCTGGGGCTGTTGTGCCTGCTGCCCTTCGCCGTATTTTTCATCGTGTTTCAGATCGCA CCGCTGTTGTGGGTCGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MKHNVILIVLDGLNYEVARHAMGHLQAWHDAGRAALYKIECELPALSRPLYECILTGVAPIDSGIVHNNVSRLSNQRSIF HYARDAGLSTAAAAYHWVSELYNRTPFDPARDRHTEAADLPIQHGLFYWADHYPDSHLFADAESLRLSHAPNFLLIHPMN IDDAGHKHGLDTAQYRNSARSADIILADYLQRWLDAGYQVLVTADHGMNNDRSHNGLLPEEREVPLFVIGDAFSLNVDAA PRQTDLCGTVCELLGIPHDKPVCREIFN
Sequences:
>Translated_268_residues MKHNVILIVLDGLNYEVARHAMGHLQAWHDAGRAALYKIECELPALSRPLYECILTGVAPIDSGIVHNNVSRLSNQRSIF HYARDAGLSTAAAAYHWVSELYNRTPFDPARDRHTEAADLPIQHGLFYWADHYPDSHLFADAESLRLSHAPNFLLIHPMN IDDAGHKHGLDTAQYRNSARSADIILADYLQRWLDAGYQVLVTADHGMNNDRSHNGLLPEEREVPLFVIGDAFSLNVDAA PRQTDLCGTVCELLGIPHDKPVCREIFN >Mature_268_residues MKHNVILIVLDGLNYEVARHAMGHLQAWHDAGRAALYKIECELPALSRPLYECILTGVAPIDSGIVHNNVSRLSNQRSIF HYARDAGLSTAAAAYHWVSELYNRTPFDPARDRHTEAADLPIQHGLFYWADHYPDSHLFADAESLRLSHAPNFLLIHPMN IDDAGHKHGLDTAQYRNSARSADIILADYLQRWLDAGYQVLVTADHGMNNDRSHNGLLPEEREVPLFVIGDAFSLNVDAA PRQTDLCGTVCELLGIPHDKPVCREIFN
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30028; Mature: 30028
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHNVILIVLDGLNYEVARHAMGHLQAWHDAGRAALYKIECELPALSRPLYECILTGVAP CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCC IDSGIVHNNVSRLSNQRSIFHYARDAGLSTAAAAYHWVSELYNRTPFDPARDRHTEAADL CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHCC PIQHGLFYWADHYPDSHLFADAESLRLSHAPNFLLIHPMNIDDAGHKHGLDTAQYRNSAR CHHCCEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCC SADIILADYLQRWLDAGYQVLVTADHGMNNDRSHNGLLPEEREVPLFVIGDAFSLNVDAA CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCC PRQTDLCGTVCELLGIPHDKPVCREIFN CCCHHHHHHHHHHHCCCCCCHHHHHHCC >Mature Secondary Structure MKHNVILIVLDGLNYEVARHAMGHLQAWHDAGRAALYKIECELPALSRPLYECILTGVAP CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCC IDSGIVHNNVSRLSNQRSIFHYARDAGLSTAAAAYHWVSELYNRTPFDPARDRHTEAADL CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHCC PIQHGLFYWADHYPDSHLFADAESLRLSHAPNFLLIHPMNIDDAGHKHGLDTAQYRNSAR CHHCCEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCC SADIILADYLQRWLDAGYQVLVTADHGMNNDRSHNGLLPEEREVPLFVIGDAFSLNVDAA CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCC PRQTDLCGTVCELLGIPHDKPVCREIFN CCCHHHHHHHHHHHCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA