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The map label for this gene is apeB [H]

Identifier: 66044854

GI number: 66044854

Start: 1811972

End: 1813261

Strand: Reverse

Name: apeB [H]

Synonym: Psyr_1609

Alternate gene names: 66044854

Gene position: 1813261-1811972 (Counterclockwise)

Preceding gene: 66044855

Following gene: 66044851

Centisome position: 29.76

GC content: 61.4

Gene sequence:

>1290_bases
ATGCGCGCAGAGTTGAACAAAGGCCTTATTGATTTCCTGAAGGCTTCTCCTACCCCATTCCACGCCACTGCCACCCTCGT
GCAACACTTTGAAGCCGCAGGTTTTCAGCGGCTGGACGAACGTGATACGTGGGCAGTAGAAACCGGAGGTCGTTACTTCG
TCACCCGTAACGACTCCTCCATTGTCGCTTTCCGCATGGGCCGTCAGTCGCCACTCAGTGGCGGCATCCGCATGGTCGGT
GCGCACACCGACAGCCCGTGCCTGCGGGTCAAGCCGCAACCGGAACTGCAACGCCAGGGTTTTTGGCAACTGGGCGTCGA
AGTCTACGGCGGCGCCTTGCTGGCCCCCTGGTTTGATCGGGATCTGTCGCTGGCCGGCCGCGTCACTTTCCGCCGCGACG
GCAAGGTCGAAAGCCAACTGATCGACTTCAAGCTGCCGATCGCCGTGATTCCCAATCTGGCCATTCACCTGAACCGCACT
GCCAACGAAGGCTGGGCGATCAACGCGCAAAACGAACTGCCGCCCATCCTGGCGCAGGTAGCCGGTGACGAGCGCGCGGA
CTTCCGTGCGCTGCTGACCGACCAACTGGCCCGCGAACACGGGCTCAATGCCGATGTGGTGCTCGATTACGAGCTGAGCT
TCTACGACACCCAGGGCGCCGCTGTGGTCGGCCTCAACGGGGATTTCCTGGCAGGCGCACGCCTGGACAACCTGTTGTCG
TGTTTCGCCGGGATGCAGGCACTGCTCAACACCGAGAGCGACGAAACCGCCCTGCTGGTGTGCACCGATCACGAAGAGGT
TGGCTCGTCTTCTGCCTGTGGCGCAGACGGCGCGATGCTTGAGCAGATCGTCCAGCGCCTGTTGCCAAGCAGCGAAGACT
ACGTGCGCACGATTCAGAAGTCGCTGCTGATCTCAGCCGACAACGCCCACGGCATTCATCCCAACTACGCTGACAAGCAC
GACGCCAATCACGGCCCCAAGCTCAACGCCGGGCCGGTGATCAAGGTCAACAGCAACCAGCGTTACGCCACCAACAGCGA
AACCGCCGGTTTCTTCCGCCATCTGTGCATGGCCGAAGAAGTCCCGGTGCAGAGCTTTGTGGTACGCAGCGACATGGGTT
GCGGCTCGACCATCGGACCGATCACTGCTAGCCACCTGGGTATCCGCACGGTAGATATCGGCTTGCCAACGTTCGCCATG
CACTCGATCCGCGAACTGGCCGGCAGCCATGACCTGGCGCATCTGGTCAAGGTATTGAGCGCGTTCTATGCCAGCCACGA
GCTGCCATAA

Upstream 100 bases:

>100_bases
TCACACAGCGCATCGGCACGAGAGCTGCGCGATGAGCGCAACCGAAGGCAGCAAATCATCCAATACGGTAAACTCGCGCC
ATTGTTGTCTGGAGCTATTT

Downstream 100 bases:

>100_bases
CGACTGAGGCGATCATCGGTAACGCGGGAGCGGCCTGCTGCTCTCGCGTGTCAGTATTGACCCCGGTAAACGCCATTGAA
AAAAATAAAACCTCTCTAAT

Product: putative aminopeptidase 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MRAELNKGLIDFLKASPTPFHATATLVQHFEAAGFQRLDERDTWAVETGGRYFVTRNDSSIVAFRMGRQSPLSGGIRMVG
AHTDSPCLRVKPQPELQRQGFWQLGVEVYGGALLAPWFDRDLSLAGRVTFRRDGKVESQLIDFKLPIAVIPNLAIHLNRT
ANEGWAINAQNELPPILAQVAGDERADFRALLTDQLAREHGLNADVVLDYELSFYDTQGAAVVGLNGDFLAGARLDNLLS
CFAGMQALLNTESDETALLVCTDHEEVGSSSACGADGAMLEQIVQRLLPSSEDYVRTIQKSLLISADNAHGIHPNYADKH
DANHGPKLNAGPVIKVNSNQRYATNSETAGFFRHLCMAEEVPVQSFVVRSDMGCGSTIGPITASHLGIRTVDIGLPTFAM
HSIRELAGSHDLAHLVKVLSAFYASHELP

Sequences:

>Translated_429_residues
MRAELNKGLIDFLKASPTPFHATATLVQHFEAAGFQRLDERDTWAVETGGRYFVTRNDSSIVAFRMGRQSPLSGGIRMVG
AHTDSPCLRVKPQPELQRQGFWQLGVEVYGGALLAPWFDRDLSLAGRVTFRRDGKVESQLIDFKLPIAVIPNLAIHLNRT
ANEGWAINAQNELPPILAQVAGDERADFRALLTDQLAREHGLNADVVLDYELSFYDTQGAAVVGLNGDFLAGARLDNLLS
CFAGMQALLNTESDETALLVCTDHEEVGSSSACGADGAMLEQIVQRLLPSSEDYVRTIQKSLLISADNAHGIHPNYADKH
DANHGPKLNAGPVIKVNSNQRYATNSETAGFFRHLCMAEEVPVQSFVVRSDMGCGSTIGPITASHLGIRTVDIGLPTFAM
HSIRELAGSHDLAHLVKVLSAFYASHELP
>Mature_429_residues
MRAELNKGLIDFLKASPTPFHATATLVQHFEAAGFQRLDERDTWAVETGGRYFVTRNDSSIVAFRMGRQSPLSGGIRMVG
AHTDSPCLRVKPQPELQRQGFWQLGVEVYGGALLAPWFDRDLSLAGRVTFRRDGKVESQLIDFKLPIAVIPNLAIHLNRT
ANEGWAINAQNELPPILAQVAGDERADFRALLTDQLAREHGLNADVVLDYELSFYDTQGAAVVGLNGDFLAGARLDNLLS
CFAGMQALLNTESDETALLVCTDHEEVGSSSACGADGAMLEQIVQRLLPSSEDYVRTIQKSLLISADNAHGIHPNYADKH
DANHGPKLNAGPVIKVNSNQRYATNSETAGFFRHLCMAEEVPVQSFVVRSDMGCGSTIGPITASHLGIRTVDIGLPTFAM
HSIRELAGSHDLAHLVKVLSAFYASHELP

Specific function: Unknown

COG id: COG1362

COG function: function code E; Aspartyl aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M18 family [H]

Homologues:

Organism=Homo sapiens, GI156416028, Length=446, Percent_Identity=41.7040358744395, Blast_Score=346, Evalue=2e-95,
Organism=Caenorhabditis elegans, GI17552916, Length=442, Percent_Identity=40.9502262443439, Blast_Score=319, Evalue=2e-87,
Organism=Saccharomyces cerevisiae, GI6321905, Length=467, Percent_Identity=40.0428265524625, Blast_Score=341, Evalue=1e-94,
Organism=Saccharomyces cerevisiae, GI6322746, Length=448, Percent_Identity=29.4642857142857, Blast_Score=206, Evalue=8e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022984
- InterPro:   IPR001948 [H]

Pfam domain/function: PF02127 Peptidase_M18 [H]

EC number: NA

Molecular weight: Translated: 46708; Mature: 46708

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAELNKGLIDFLKASPTPFHATATLVQHFEAAGFQRLDERDTWAVETGGRYFVTRNDSS
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCC
IVAFRMGRQSPLSGGIRMVGAHTDSPCLRVKPQPELQRQGFWQLGVEVYGGALLAPWFDR
EEEEECCCCCCCCCCEEEEECCCCCCEEEECCCCCHHHCCHHHCCHHHHCCEEECCCCCC
DLSLAGRVTFRRDGKVESQLIDFKLPIAVIPNLAIHLNRTANEGWAINAQNELPPILAQV
CCCEEEEEEEECCCCHHHHHEEEECCHHHHCCEEEEEECCCCCCEEEECCCCCCHHHHHH
AGDERADFRALLTDQLAREHGLNADVVLDYELSFYDTQGAAVVGLNGDFLAGARLDNLLS
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCEEEECCCCEECCHHHHHHHH
CFAGMQALLNTESDETALLVCTDHEEVGSSSACGADGAMLEQIVQRLLPSSEDYVRTIQK
HHHHHHHHHCCCCCCEEEEEEECHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
SLLISADNAHGIHPNYADKHDANHGPKLNAGPVIKVNSNQRYATNSETAGFFRHLCMAEE
HHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCC
VPVQSFVVRSDMGCGSTIGPITASHLGIRTVDIGLPTFAMHSIRELAGSHDLAHLVKVLS
CCHHHHHHHCCCCCCCCCCCCHHHHCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHH
AFYASHELP
HHHHHCCCC
>Mature Secondary Structure
MRAELNKGLIDFLKASPTPFHATATLVQHFEAAGFQRLDERDTWAVETGGRYFVTRNDSS
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCC
IVAFRMGRQSPLSGGIRMVGAHTDSPCLRVKPQPELQRQGFWQLGVEVYGGALLAPWFDR
EEEEECCCCCCCCCCEEEEECCCCCCEEEECCCCCHHHCCHHHCCHHHHCCEEECCCCCC
DLSLAGRVTFRRDGKVESQLIDFKLPIAVIPNLAIHLNRTANEGWAINAQNELPPILAQV
CCCEEEEEEEECCCCHHHHHEEEECCHHHHCCEEEEEECCCCCCEEEECCCCCCHHHHHH
AGDERADFRALLTDQLAREHGLNADVVLDYELSFYDTQGAAVVGLNGDFLAGARLDNLLS
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCEEEECCCCEECCHHHHHHHH
CFAGMQALLNTESDETALLVCTDHEEVGSSSACGADGAMLEQIVQRLLPSSEDYVRTIQK
HHHHHHHHHCCCCCCEEEEEEECHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
SLLISADNAHGIHPNYADKHDANHGPKLNAGPVIKVNSNQRYATNSETAGFFRHLCMAEE
HHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCC
VPVQSFVVRSDMGCGSTIGPITASHLGIRTVDIGLPTFAMHSIRELAGSHDLAHLVKVLS
CCHHHHHHHCCCCCCCCCCCCHHHHCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHH
AFYASHELP
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA