Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is 66044726

Identifier: 66044726

GI number: 66044726

Start: 1668346

End: 1669515

Strand: Direct

Name: 66044726

Synonym: Psyr_1479

Alternate gene names: NA

Gene position: 1668346-1669515 (Clockwise)

Preceding gene: 66044722

Following gene: 66044737

Centisome position: 27.38

GC content: 56.67

Gene sequence:

>1170_bases
ATGAGTGAGACACGACTCGCAGCTATAATGGGCGGCAGCCATCCACTGGCGGCTTTGTCCAATCCACGAGAAGCGATCCG
GCAGTTCACACCCAACTGGTTCGCCGCCACGATGGGCACCGGGATTCTGGCGCTGGCTCTGGGCCAACTGCCCTTTGTTG
CGCAGTGGCCCAAAGCGTTAGGGGAAGCCTTGTGGTTTTTTAATATCGTGCTGTTTTGCCTGTTTACGCTGATGTACGCG
AGCCGTTGGGTATTGTTCTTCGATGAGGCCAAACAGATCTTCGGCCACTCCACTGTATCGATGTTTTTTGGAACTATCCC
CATGGGATTGGCGACCATCATCAACGGTTTTCTCCTTTATGGTTTGCCACGCTGGGGGGGTGGGGTAGTCGCTTTAGCCG
AAGTGTTGTGGTGGATCGATGTCACCATGGCATTGGCCTGCGGGGTGCTGATCCCGTATATGATGTTTACTCGCCAGCAG
CACAGCATTGATCAGATGACAGCGGTATGGCTGCTGCCAGTAGTTGCGGCTGAGGTGGCTGCCGCCAGTGGCGGTCTATT
GGCTCCGCACCTCGCTGATGCGAGCGCACAGTTCACCATGCTCATCACCAGCTACGTGCTGTGGGCCTACTCGGTGCCCG
TCGCCTTGAGCATACTGGTGATCCTGTTACTGCGCATGGCTCTGCACAAACTACCTCATGAAAGCATGGCAGCATCGAGC
TGGCTGTCTTTAGGGCCGATCGGTACCGGGGCTTTGGGGATGTTGCTGCTGGGCAACGATGCTCCAGCAATCTTTGCTGC
CCATGGAATGGCAAGCATCGGCGGCGTAGCCGAGGGCATTGGCTTGATCGGTGGTGTGCTGTTCTGGGGGCTGGGATTGT
GGTGGATGGTATTGGCGCTGCTAATTACCGGGCGCTACTTCAGGGAGGGCATTCCCTTCAACCTCGGCTGGTGGGGCTTC
ACCTTTCCGCTGGGAGTGTACGCCGTAACAACCCTCAAATTGGGCTCTATGCTGCACCTCACGTTCTTTAGCTTCTTTGG
CGTGGTGCTGGTGTTGATGCTGACTGTCATGTGGATGATCGTCGCGGCTAAAACCCTGGCTGGTGCCTATCGCGGCAACT
TGTTCGTCTCGCCGTGTATCCACTCGCTGAGCAAGGCGAGCAAAACCTGA

Upstream 100 bases:

>100_bases
TAGGTCATATAAACCTATACTATCCGTTTTTACCGCTATTCCCATCAAGCTATACTTCAACCATGTCATATCGAAGGCAC
ACTGAAGCGGGAGCGCGAAA

Downstream 100 bases:

>100_bases
GCCTTTGGCTACTTGATCGACTGTTTGGCGTGACGCAGTGTGGACAAAATGCGCTGCCTAACATTCGGGTGAGTGCAAAC
GGAAAGGGGGCTTGGGTGTG

Product: C4-dicarboxylate transporter/malic acid transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MSETRLAAIMGGSHPLAALSNPREAIRQFTPNWFAATMGTGILALALGQLPFVAQWPKALGEALWFFNIVLFCLFTLMYA
SRWVLFFDEAKQIFGHSTVSMFFGTIPMGLATIINGFLLYGLPRWGGGVVALAEVLWWIDVTMALACGVLIPYMMFTRQQ
HSIDQMTAVWLLPVVAAEVAAASGGLLAPHLADASAQFTMLITSYVLWAYSVPVALSILVILLLRMALHKLPHESMAASS
WLSLGPIGTGALGMLLLGNDAPAIFAAHGMASIGGVAEGIGLIGGVLFWGLGLWWMVLALLITGRYFREGIPFNLGWWGF
TFPLGVYAVTTLKLGSMLHLTFFSFFGVVLVLMLTVMWMIVAAKTLAGAYRGNLFVSPCIHSLSKASKT

Sequences:

>Translated_389_residues
MSETRLAAIMGGSHPLAALSNPREAIRQFTPNWFAATMGTGILALALGQLPFVAQWPKALGEALWFFNIVLFCLFTLMYA
SRWVLFFDEAKQIFGHSTVSMFFGTIPMGLATIINGFLLYGLPRWGGGVVALAEVLWWIDVTMALACGVLIPYMMFTRQQ
HSIDQMTAVWLLPVVAAEVAAASGGLLAPHLADASAQFTMLITSYVLWAYSVPVALSILVILLLRMALHKLPHESMAASS
WLSLGPIGTGALGMLLLGNDAPAIFAAHGMASIGGVAEGIGLIGGVLFWGLGLWWMVLALLITGRYFREGIPFNLGWWGF
TFPLGVYAVTTLKLGSMLHLTFFSFFGVVLVLMLTVMWMIVAAKTLAGAYRGNLFVSPCIHSLSKASKT
>Mature_388_residues
SETRLAAIMGGSHPLAALSNPREAIRQFTPNWFAATMGTGILALALGQLPFVAQWPKALGEALWFFNIVLFCLFTLMYAS
RWVLFFDEAKQIFGHSTVSMFFGTIPMGLATIINGFLLYGLPRWGGGVVALAEVLWWIDVTMALACGVLIPYMMFTRQQH
SIDQMTAVWLLPVVAAEVAAASGGLLAPHLADASAQFTMLITSYVLWAYSVPVALSILVILLLRMALHKLPHESMAASSW
LSLGPIGTGALGMLLLGNDAPAIFAAHGMASIGGVAEGIGLIGGVLFWGLGLWWMVLALLITGRYFREGIPFNLGWWGFT
FPLGVYAVTTLKLGSMLHLTFFSFFGVVLVLMLTVMWMIVAAKTLAGAYRGNLFVSPCIHSLSKASKT

Specific function: Unknown

COG id: COG1275

COG function: function code P; Tellurite resistance protein and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tellurite-resistance/dicarboxylate transporter (TDT) family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6325165, Length=367, Percent_Identity=22.0708446866485, Blast_Score=77, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004695
- InterPro:   IPR011552 [H]

Pfam domain/function: PF03595 C4dic_mal_tran [H]

EC number: NA

Molecular weight: Translated: 42058; Mature: 41927

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETRLAAIMGGSHPLAALSNPREAIRQFTPNWFAATMGTGILALALGQLPFVAQWPKAL
CCCCCEEHHHCCCCCHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
GEALWFFNIVLFCLFTLMYASRWVLFFDEAKQIFGHSTVSMFFGTIPMGLATIINGFLLY
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
GLPRWGGGVVALAEVLWWIDVTMALACGVLIPYMMFTRQQHSIDQMTAVWLLPVVAAEVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASGGLLAPHLADASAQFTMLITSYVLWAYSVPVALSILVILLLRMALHKLPHESMAASS
HCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
WLSLGPIGTGALGMLLLGNDAPAIFAAHGMASIGGVAEGIGLIGGVLFWGLGLWWMVLAL
HHHCCCCCCCHHHHEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LITGRYFREGIPFNLGWWGFTFPLGVYAVTTLKLGSMLHLTFFSFFGVVLVLMLTVMWMI
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAKTLAGAYRGNLFVSPCIHSLSKASKT
HHHHHHHHHHCCCEEHHHHHHHHHHCCCC
>Mature Secondary Structure 
SETRLAAIMGGSHPLAALSNPREAIRQFTPNWFAATMGTGILALALGQLPFVAQWPKAL
CCCCEEHHHCCCCCHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
GEALWFFNIVLFCLFTLMYASRWVLFFDEAKQIFGHSTVSMFFGTIPMGLATIINGFLLY
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
GLPRWGGGVVALAEVLWWIDVTMALACGVLIPYMMFTRQQHSIDQMTAVWLLPVVAAEVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASGGLLAPHLADASAQFTMLITSYVLWAYSVPVALSILVILLLRMALHKLPHESMAASS
HCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
WLSLGPIGTGALGMLLLGNDAPAIFAAHGMASIGGVAEGIGLIGGVLFWGLGLWWMVLAL
HHHCCCCCCCHHHHEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LITGRYFREGIPFNLGWWGFTFPLGVYAVTTLKLGSMLHLTFFSFFGVVLVLMLTVMWMI
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAKTLAGAYRGNLFVSPCIHSLSKASKT
HHHHHHHHHHCCCEEHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]