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The map label for this gene is recA [H]

Identifier: 66044626

GI number: 66044626

Start: 1562480

End: 1563544

Strand: Direct

Name: recA [H]

Synonym: Psyr_1378

Alternate gene names: 66044626

Gene position: 1562480-1563544 (Clockwise)

Preceding gene: 66044625

Following gene: 66044627

Centisome position: 25.64

GC content: 58.59

Gene sequence:

>1065_bases
ATGGACGACAACAAGAAGAAAGCCTTGGCTGCGGCCTTGGGTCAGATCGAGCGTCAGTTCGGTAAAGGCGCCGTGATGCG
CATGGGCGATCACGATCGCCAGGCGATCCCTGCCATCTCCACCGGTTCGCTGGGTCTGGATATCGCTCTCGGTATTGGCG
GACTGCCAAAAGGCCGGATCGTGGAAATCTACGGTCCTGAGTCTTCCGGTAAAACCACACTGACGCTGTCGGTCATCGCC
CAGGCCCAGAAAATGGGCGCTACCTGTGCCTTTGTCGACGCCGAACACGCGCTGGATCCGGAGTACGCAGGCAAACTGGG
CGTCAATGTCGACGACCTGCTGGTTTCGCAGCCGGACACTGGTGAGCAGGCGCTGGAAATCACCGACATGCTGGTGCGCT
CCAATGCCATCGACGTGATCGTGGTCGACTCCGTTGCTGCGCTGGTGCCGAAGGCAGAGATCGAAGGCGAAATGGGTGAC
ATGCACGTGGGTCTGCAGGCGCGTCTGATGTCGCAGGCGCTGCGCAAGATCACCGGCAACATCAAGAACGCCAACTGCCT
GGTGATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCAGCCCGGAAACCACCACCGGTGGTAACGCGC
TGAAGTTTTACGCTTCGGTACGCCTGGACATCCGTCGTACGGGCGCGGTCAAGGAAGGCGATGAGGTTGTCGGCAGCGAA
ACCCGCGTCAAGGTTGTGAAGAACAAGGTGGCTCCGCCGTTCCGTCAGGCCGAGTTCCAGATTCTTTACGGCAAGGGTAT
CTACCTGAACGGTGAAATCGTCGATCTGGCCGTTCTGCATGGTTTTGTCGAGAAGTCCGGTGCCTGGTACAGCTACCAGG
GCAGCAAGATTGGTCAGGGCAAGGCCAACTCGGCCAAGTTCCTGGCAGATAACCCGGAAATCTGCAAAGCGCTCGAGAAG
CAGATCCGCGACAAATTGCTGACCCCTGGCGTCGACACCAAGGCTGTCGGCTCCCGTGAAGCAGTGGCTGCCGATGATAT
GTCTGAAGCAGATGTCGATATCTGA

Upstream 100 bases:

>100_bases
GGGGTAGGCGCGCGCTCACTGCTGTGGAATAATACTGTCTACTTATACAGGTGTTGTGGCCATCAAGGCCCTAATTGAAT
TTGATTACGTGAGGACTTCA

Downstream 100 bases:

>100_bases
TAGCCATGCCTGCCGTACTCGATACACCTGTCGCCGTCAGGCGCACTGCAATGGACCTGCTCGCACGTCGCGAGCACGGT
CGAGTCGAGCTGACGCGTAA

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEIVDLAVLHGFVEKSGAWYSYQGSKIGQGKANSAKFLADNPEICKALEK
QIRDKLLTPGVDTKAVGSREAVAADDMSEADVDI

Sequences:

>Translated_354_residues
MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEIVDLAVLHGFVEKSGAWYSYQGSKIGQGKANSAKFLADNPEICKALEK
QIRDKLLTPGVDTKAVGSREAVAADDMSEADVDI
>Mature_354_residues
MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEIVDLAVLHGFVEKSGAWYSYQGSKIGQGKANSAKFLADNPEICKALEK
QIRDKLLTPGVDTKAVGSREAVAADDMSEADVDI

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=328, Percent_Identity=74.0853658536585, Blast_Score=506, Evalue=1e-145,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 37745; Mature: 37745

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRI
CCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCE
VEIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDT
EEEECCCCCCCEEEEHHHHHHHHHCCCEEEEECHHHCCCHHHCCCCCCCHHHHEECCCCC
GEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN
CHHHHHHHHHHHHCCCCEEEEECHHHHHCCCHHCCCCCCCEECCHHHHHHHHHHHHHHCC
IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
CCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCHHCCCC
TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEIVDLAVLHGFVEKSGAWYSYQGSKIGQG
HHHHHHHHHCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCC
KANSAKFLADNPEICKALEKQIRDKLLTPGVDTKAVGSREAVAADDMSEADVDI
CCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRI
CCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCE
VEIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDT
EEEECCCCCCCEEEEHHHHHHHHHCCCEEEEECHHHCCCHHHCCCCCCCHHHHEECCCCC
GEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN
CHHHHHHHHHHHHCCCCEEEEECHHHHHCCCHHCCCCCCCEECCHHHHHHHHHHHHHHCC
IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
CCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCHHCCCC
TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEIVDLAVLHGFVEKSGAWYSYQGSKIGQG
HHHHHHHHHCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCC
KANSAKFLADNPEICKALEKQIRDKLLTPGVDTKAVGSREAVAADDMSEADVDI
CCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA