| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is recX [H]
Identifier: 66044627
GI number: 66044627
Start: 1563550
End: 1564017
Strand: Direct
Name: recX [H]
Synonym: Psyr_1379
Alternate gene names: 66044627
Gene position: 1563550-1564017 (Clockwise)
Preceding gene: 66044626
Following gene: 66044630
Centisome position: 25.66
GC content: 60.04
Gene sequence:
>468_bases ATGCCTGCCGTACTCGATACACCTGTCGCCGTCAGGCGCACTGCAATGGACCTGCTCGCACGTCGCGAGCACGGTCGAGT CGAGCTGACGCGTAAACTGCGTCAGCGCGGCGCTCCCCCCGAGCTTATCGATGCCGCCCTTGATCGCCTGGTCGAGGAAG GTCTGCTCTCTGAATCCCGCTACCTTGAAAGCTTCGTGTCTTACCGGGCACGTTCGGGCTACGGTCCTGTTCGTATTCGC GAAGAGCTTGGTCAGCGTGGCTTGCAACGTGCCGACATTGAGCAGGCGCTCAGGGACTGCGGCATTGATTGGCAAGAGAA GCTTTACGAGCTTTGGCAGCGCAAGTTTGCCGGTGCTCTGCCTGTCGATGCGCGCGAGCGAGCCAAACAGGGGCGTTTTT TGAGTTATCGAGGCTATCCGCTGGAAATGATCGGCCGCTTGTTAAGCGGCCGTGGCGGAGATGACTGA
Upstream 100 bases:
>100_bases ACAAATTGCTGACCCCTGGCGTCGACACCAAGGCTGTCGGCTCCCGTGAAGCAGTGGCTGCCGATGATATGTCTGAAGCA GATGTCGATATCTGATAGCC
Downstream 100 bases:
>100_bases TATATCGGGGCGTTTACTGTGGCGCCCGTTTCTGAGCTGCGTCCCTGGTCGCTGAAGCGTCTTCCCAGTTTTCCTGTTGG TTGATGTAATCCACCAGTTC
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MPAVLDTPVAVRRTAMDLLARREHGRVELTRKLRQRGAPPELIDAALDRLVEEGLLSESRYLESFVSYRARSGYGPVRIR EELGQRGLQRADIEQALRDCGIDWQEKLYELWQRKFAGALPVDARERAKQGRFLSYRGYPLEMIGRLLSGRGGDD
Sequences:
>Translated_155_residues MPAVLDTPVAVRRTAMDLLARREHGRVELTRKLRQRGAPPELIDAALDRLVEEGLLSESRYLESFVSYRARSGYGPVRIR EELGQRGLQRADIEQALRDCGIDWQEKLYELWQRKFAGALPVDARERAKQGRFLSYRGYPLEMIGRLLSGRGGDD >Mature_154_residues PAVLDTPVAVRRTAMDLLARREHGRVELTRKLRQRGAPPELIDAALDRLVEEGLLSESRYLESFVSYRARSGYGPVRIRE ELGQRGLQRADIEQALRDCGIDWQEKLYELWQRKFAGALPVDARERAKQGRFLSYRGYPLEMIGRLLSGRGGDD
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
Organism=Escherichia coli, GI1789050, Length=143, Percent_Identity=41.958041958042, Blast_Score=97, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 17741; Mature: 17609
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAVLDTPVAVRRTAMDLLARREHGRVELTRKLRQRGAPPELIDAALDRLVEEGLLSESR CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH YLESFVSYRARSGYGPVRIREELGQRGLQRADIEQALRDCGIDWQEKLYELWQRKFAGAL HHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC PVDARERAKQGRFLSYRGYPLEMIGRLLSGRGGDD CCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure PAVLDTPVAVRRTAMDLLARREHGRVELTRKLRQRGAPPELIDAALDRLVEEGLLSESR CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH YLESFVSYRARSGYGPVRIREELGQRGLQRADIEQALRDCGIDWQEKLYELWQRKFAGAL HHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC PVDARERAKQGRFLSYRGYPLEMIGRLLSGRGGDD CCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA