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The map label for this gene is HrcR [H]

Identifier: 66044459

GI number: 66044459

Start: 1366278

End: 1366931

Strand: Reverse

Name: HrcR [H]

Synonym: Psyr_1208

Alternate gene names: 66044459

Gene position: 1366931-1366278 (Counterclockwise)

Preceding gene: 66044460

Following gene: 66044458

Centisome position: 22.43

GC content: 57.65

Gene sequence:

>654_bases
ATGATCATGGAGGGCATCAACCCGATCATGCTGGCGCTGTTTCTCGGCTCGCTGTCGCTGATCCCGTTCCTGTTGATCGT
CTGTACCGCCTTTCTGAAGATCGCCATGACGCTGCTGATCACCCGCAACGCGATCGGCGTTCAGCAAGTACCGCCGAACA
TGGCGTTGTATGGCATCGCCCTGGCCGCGACGATGTTCGTCATGGCTCCGGTGGCGCATGACATACAGCAGCGGGTCCAT
GAACACCCGCTGGAACTGAGCAACGCCGACAAACTGCAGAGCAGCCTCAAAGTCGTCATCGAGCCGCTGCAACGCTTCAT
GACACGCAACACCGATCCGGACGTCGTGGCCCACCTGCTGGAAAATACCCAGCGCATGTGGCCCAAGGAAATGGCCGATC
AGGCCAGCAAAGACGATCTTCTGCTGGCGATCCCGGCCTTTGTGCTGTCGGAATTGCAGGCCGGTTTCGAGATCGGTTTT
CTGATCTATATCCCCTTCATCGTCATTGACCTGATTGTCTCCAACCTGTTGCTGGCACTGGGCATGCAGATGGTCTCGCC
GATGACACTGTCGCTGCCGCTCAAACTGCTGCTGTTCGTGCTCGTATCGGGCTGGTCGCGTCTGCTCGACAGCCTGTTCT
ATTCCTACATGTGA

Upstream 100 bases:

>100_bases
ACGCCACGCTGTGCCATGGCGAGCAGGTGGTTGCCGAAGGCGAACTGGTCGACGTCGAAGGCCGCCTCGGTTTGCAGATT
ACCCGGCTGGTGGCGCGCTC

Downstream 100 bases:

>100_bases
GGCGGTCATGGAAGCGTTGGCGTTGTTCAAGCAAGGCATGTTTCTGGTCGTCATCCTGACCGCCCCGCCGCTGGCCGTTG
CGGTGCTGGTGGGTGTGGTC

Product: type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MIMEGINPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVH
EHPLELSNADKLQSSLKVVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQASKDDLLLAIPAFVLSELQAGFEIGF
LIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVLVSGWSRLLDSLFYSYM

Sequences:

>Translated_217_residues
MIMEGINPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVH
EHPLELSNADKLQSSLKVVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQASKDDLLLAIPAFVLSELQAGFEIGF
LIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVLVSGWSRLLDSLFYSYM
>Mature_217_residues
MIMEGINPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIALAATMFVMAPVAHDIQQRVH
EHPLELSNADKLQSSLKVVIEPLQRFMTRNTDPDVVAHLLENTQRMWPKEMADQASKDDLLLAIPAFVLSELQAGFEIGF
LIYIPFIVIDLIVSNLLLALGMQMVSPMTLSLPLKLLLFVLVSGWSRLLDSLFYSYM

Specific function: Required for the secretion of harpin [H]

COG id: COG4790

COG function: function code U; Type III secretory pathway, component EscR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=214, Percent_Identity=38.785046728972, Blast_Score=139, Evalue=1e-34,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005838
- InterPro:   IPR005773 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 24182; Mature: 24182

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMEGINPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
LAATMFVMAPVAHDIQQRVHEHPLELSNADKLQSSLKVVIEPLQRFMTRNTDPDVVAHLL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ENTQRMWPKEMADQASKDDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL
HHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
GMQMVSPMTLSLPLKLLLFVLVSGWSRLLDSLFYSYM
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIMEGINPIMLALFLGSLSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
LAATMFVMAPVAHDIQQRVHEHPLELSNADKLQSSLKVVIEPLQRFMTRNTDPDVVAHLL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ENTQRMWPKEMADQASKDDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLLLAL
HHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
GMQMVSPMTLSLPLKLLLFVLVSGWSRLLDSLFYSYM
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7579617 [H]