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The map label for this gene is hlyB [H]

Identifier: 66044401

GI number: 66044401

Start: 1301387

End: 1303042

Strand: Reverse

Name: hlyB [H]

Synonym: Psyr_1150

Alternate gene names: 66044401

Gene position: 1303042-1301387 (Counterclockwise)

Preceding gene: 66044402

Following gene: 66044400

Centisome position: 21.38

GC content: 58.39

Gene sequence:

>1656_bases
ATGTCCCAGATTCAAACGACGGCTACCAGCGGCATGACCGTAAAAAACAGGCTGATGGCGTCTACATTTGCCATCATCGC
TGCATTTATCGTGCTGTCGGTTTTCATGATCCAGACGCTCAAGACATCCACCGCGAATGTCGACGCCCTCTACAACAGAG
ATTTTCTGGCTACGGAAGCGGTCAACAATATCGATGGTGCGCTTACGCGGGTGGATATCAATATTTTACGCATGATCGCC
ATCGGCAACCCGGAGCAGACGGCAGGCTGGAAGAATGAAAACGAAGCGGCCTTCAGCAAGCTGGATGAGCTGACCGTCCA
GTTGAGCAAGAACACCGCAGAAACCCTTGATGTGACCTTGACCCAACAATTGCAGCGTGGCTATGTCAAGTTGCGGGACG
GCATGCGGCACCAGACCAGCGTGATCCAGACCGGTGATATCGCCGCCGCCACCAACATTAACCGCACCGAAGTCAAACCC
TTTGCCGAGCAGGTGTTCAAGACCCTGCAAACGCTGCGCGAACAAGGCAAGCAACGTGCGGGCGAGCGTTTCGATGCGCA
GGAATCAAGCGCCACTCAAGCCAATAATCTGTCCATCGCCGCCACGCTGACAATCGCGATACTGGGCGTGATCGTGACCC
TCATGACCATACGCAGCATCCTGTCAGCCATTGGGGGCGAACCGAGCACCGTCGCGACGATCACACGCACCATCGCCCGA
GGCGATTTGAGCAGCACGATCAACATCAGCGCCAATGACACTTCCAGCGTTGCTGCTGCGGTCGTTGCGATGCAGACTCA
ATTGCGCGACACCCTGCAGCAGATCTCCAGTTCTGCAACTCAACTGGCCGCCGCTGCCGAAGAGATGACTGCAATCACCG
AAGACGGTGTGCAAGGCATCCAGCGTCAGAACAACGAAATCGACCAGGCCGCCACCGCAGTCAATGAAATGACCAGCGCA
GTGGAAGAAGTCGCGCGCAATGCCGAGCATACGGCGCGCTCGTCCAGTAATGCGACCAGCGCCGCGCAAGACGGTCTGGG
GCTGGTCAAAAAGACCGTGACCTCAATCAACACCATGAGCACGGATGTGCAGAAAACCGCGACCCTGATTGGCGAGCTGG
CAGGTCAGTCCCGCGACATCGGCAAGGTGCTGGATGTTATTCGGGGCCTTGCGGAACAGACCAATCTGCTGGCGCTCAAT
GCGGCGATCGAAGCGGCTCGCGCGGGCGAGGCTGGACGCGGGTTTGCCGTGGTGGCGGATGAAGTGCGTGCTCTGGCTCA
CCGCACTCAGCAATCCACCAGCGAAATCGAACGTCTGGTGACCAATATTCAGAACGGCACCGAACGCGCAGTAGGCTCCA
TGCGCGGCAACACCGAGCTGGCCAGCGAAACGCTTGGCATTGCAGAGGGCGCGAACGAGTCTCTGACCGTCATCAGCGCT
GCCGTGAGCGAGATCAATGATCTCAATCTGGTGATCGCCAGTGCGGCCCAGCAGCAGGCCCATGTCGCCCGGGAAGTGGA
TCGCAACCTCATGAACATCCGTGACCTTTCGGCGCAATCTTCGTCTGGCGCGCAACAGACCGCCAGTGCAAGTCGAGAGC
TGTCAACGCTGGCGCTGGACCTGAACAACATCGTGGGACGCTTCCGCCTGTCCTGA

Upstream 100 bases:

>100_bases
TATTTAGCCATCACCTAAAGTCAGGATTTTCTACGCCGATACTTATTTGTTCCTCGGTATTACTGACGAGGCCATCAATA
GGCTTTCACAGGGAAATCCC

Downstream 100 bases:

>100_bases
TTCAATTTGCACCCTTTGCACCCCTTGCGTCATAGCGCAAAGGGTGCAGCCGGGTATTTGATTTATCCCGCCCTGCCCGC
CGTTTTTCACGCCATTTCAC

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 550

Protein sequence:

>551_residues
MSQIQTTATSGMTVKNRLMASTFAIIAAFIVLSVFMIQTLKTSTANVDALYNRDFLATEAVNNIDGALTRVDINILRMIA
IGNPEQTAGWKNENEAAFSKLDELTVQLSKNTAETLDVTLTQQLQRGYVKLRDGMRHQTSVIQTGDIAAATNINRTEVKP
FAEQVFKTLQTLREQGKQRAGERFDAQESSATQANNLSIAATLTIAILGVIVTLMTIRSILSAIGGEPSTVATITRTIAR
GDLSSTINISANDTSSVAAAVVAMQTQLRDTLQQISSSATQLAAAAEEMTAITEDGVQGIQRQNNEIDQAATAVNEMTSA
VEEVARNAEHTARSSSNATSAAQDGLGLVKKTVTSINTMSTDVQKTATLIGELAGQSRDIGKVLDVIRGLAEQTNLLALN
AAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERLVTNIQNGTERAVGSMRGNTELASETLGIAEGANESLTVISA
AVSEINDLNLVIASAAQQQAHVAREVDRNLMNIRDLSAQSSSGAQQTASASRELSTLALDLNNIVGRFRLS

Sequences:

>Translated_551_residues
MSQIQTTATSGMTVKNRLMASTFAIIAAFIVLSVFMIQTLKTSTANVDALYNRDFLATEAVNNIDGALTRVDINILRMIA
IGNPEQTAGWKNENEAAFSKLDELTVQLSKNTAETLDVTLTQQLQRGYVKLRDGMRHQTSVIQTGDIAAATNINRTEVKP
FAEQVFKTLQTLREQGKQRAGERFDAQESSATQANNLSIAATLTIAILGVIVTLMTIRSILSAIGGEPSTVATITRTIAR
GDLSSTINISANDTSSVAAAVVAMQTQLRDTLQQISSSATQLAAAAEEMTAITEDGVQGIQRQNNEIDQAATAVNEMTSA
VEEVARNAEHTARSSSNATSAAQDGLGLVKKTVTSINTMSTDVQKTATLIGELAGQSRDIGKVLDVIRGLAEQTNLLALN
AAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERLVTNIQNGTERAVGSMRGNTELASETLGIAEGANESLTVISA
AVSEINDLNLVIASAAQQQAHVAREVDRNLMNIRDLSAQSSSGAQQTASASRELSTLALDLNNIVGRFRLS
>Mature_550_residues
SQIQTTATSGMTVKNRLMASTFAIIAAFIVLSVFMIQTLKTSTANVDALYNRDFLATEAVNNIDGALTRVDINILRMIAI
GNPEQTAGWKNENEAAFSKLDELTVQLSKNTAETLDVTLTQQLQRGYVKLRDGMRHQTSVIQTGDIAAATNINRTEVKPF
AEQVFKTLQTLREQGKQRAGERFDAQESSATQANNLSIAATLTIAILGVIVTLMTIRSILSAIGGEPSTVATITRTIARG
DLSSTINISANDTSSVAAAVVAMQTQLRDTLQQISSSATQLAAAAEEMTAITEDGVQGIQRQNNEIDQAATAVNEMTSAV
EEVARNAEHTARSSSNATSAAQDGLGLVKKTVTSINTMSTDVQKTATLIGELAGQSRDIGKVLDVIRGLAEQTNLLALNA
AIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERLVTNIQNGTERAVGSMRGNTELASETLGIAEGANESLTVISAA
VSEINDLNLVIASAAQQQAHVAREVDRNLMNIRDLSAQSSSGAQQTASASRELSTLALDLNNIVGRFRLS

Specific function: May form a pore through which the hemolysin can be exported [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=352, Percent_Identity=31.25, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1788194, Length=446, Percent_Identity=27.8026905829596, Blast_Score=117, Evalue=3e-27,
Organism=Escherichia coli, GI1788195, Length=267, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1787690, Length=452, Percent_Identity=27.4336283185841, Blast_Score=111, Evalue=9e-26,
Organism=Escherichia coli, GI1789453, Length=256, Percent_Identity=29.296875, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR000727 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 58446; Mature: 58315

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQIQTTATSGMTVKNRLMASTFAIIAAFIVLSVFMIQTLKTSTANVDALYNRDFLATEA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHH
VNNIDGALTRVDINILRMIAIGNPEQTAGWKNENEAAFSKLDELTVQLSKNTAETLDVTL
HHHHCCHHHHHHHHHHHHEEECCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
TQQLQRGYVKLRDGMRHQTSVIQTGDIAAATNINRTEVKPFAEQVFKTLQTLREQGKQRA
HHHHHHHHHHHHHCCHHHHHHHCCCCCCEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHH
GERFDAQESSATQANNLSIAATLTIAILGVIVTLMTIRSILSAIGGEPSTVATITRTIAR
CCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GDLSSTINISANDTSSVAAAVVAMQTQLRDTLQQISSSATQLAAAAEEMTAITEDGVQGI
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQNNEIDQAATAVNEMTSAVEEVARNAEHTARSSSNATSAAQDGLGLVKKTVTSINTMS
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TDVQKTATLIGELAGQSRDIGKVLDVIRGLAEQTNLLALNAAIEAARAGEAGRGFAVVAD
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCHHHHHH
EVRALAHRTQQSTSEIERLVTNIQNGTERAVGSMRGNTELASETLGIAEGANESLTVISA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHH
AVSEINDLNLVIASAAQQQAHVAREVDRNLMNIRDLSAQSSSGAQQTASASRELSTLALD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LNNIVGRFRLS
HHHHHHHHCCC
>Mature Secondary Structure 
SQIQTTATSGMTVKNRLMASTFAIIAAFIVLSVFMIQTLKTSTANVDALYNRDFLATEA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHH
VNNIDGALTRVDINILRMIAIGNPEQTAGWKNENEAAFSKLDELTVQLSKNTAETLDVTL
HHHHCCHHHHHHHHHHHHEEECCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
TQQLQRGYVKLRDGMRHQTSVIQTGDIAAATNINRTEVKPFAEQVFKTLQTLREQGKQRA
HHHHHHHHHHHHHCCHHHHHHHCCCCCCEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHH
GERFDAQESSATQANNLSIAATLTIAILGVIVTLMTIRSILSAIGGEPSTVATITRTIAR
CCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GDLSSTINISANDTSSVAAAVVAMQTQLRDTLQQISSSATQLAAAAEEMTAITEDGVQGI
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQNNEIDQAATAVNEMTSAVEEVARNAEHTARSSSNATSAAQDGLGLVKKTVTSINTMS
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TDVQKTATLIGELAGQSRDIGKVLDVIRGLAEQTNLLALNAAIEAARAGEAGRGFAVVAD
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCHHHHHH
EVRALAHRTQQSTSEIERLVTNIQNGTERAVGSMRGNTELASETLGIAEGANESLTVISA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHH
AVSEINDLNLVIASAAQQQAHVAREVDRNLMNIRDLSAQSSSGAQQTASASRELSTLALD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LNNIVGRFRLS
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2162464; 10952301 [H]