Click here to switch to the map view.

The map label for this gene is 66044400

Identifier: 66044400

GI number: 66044400

Start: 1300228

End: 1301220

Strand: Reverse

Name: 66044400

Synonym: Psyr_1149

Alternate gene names: NA

Gene position: 1301220-1300228 (Counterclockwise)

Preceding gene: 66044401

Following gene: 66044390

Centisome position: 21.35

GC content: 59.21

Gene sequence:

>993_bases
ATGAAGCCCAGCAAGCCCATCACCCGCGCATTCTGCGTTGAACTGCAGCAAGAGCTGTCGATTGCCGCTGCCCGACGCGA
ATACTTTTCCCAGGAGCCACCACGTACGCGCTTCGAGTTTCTCTGCTCGAACGAAGCCTGCCGGGCGCTGGGTGCCAAAG
TGACGGGCGTGCGCTACGACGTGAAGCCTCAGGACAACCCAACCTTTGTCGCCGCGCACTTCCGTGCCAATCCGCATTAC
GACCACTCGCCGGGCTGTGAATGGGTGGACGAGGACGAAGACGACAAGGCCGCAGACCCGATTGAAGAAACCGATGTCCA
GACGCGTCTGCGCAAGGCCAAGCGCAAACTGGATGATTACATCGACGTTTTCGACCCGACGATCAAGGAGCCGGCCAAGG
AGAAGTCCGGCCTGGAAAAGGCTGGCGCACCGGTGCAACGTCCACCCGCTGCCAATCCGCCAATAGAGCCTGCTACGCCG
AAGGTGCCCCGTTACAGCGAGACCCGCACCAATAACCTGGAACGGTTGGTGGACAGTTATCGGCAGGCCAAGGCTGAGCT
GTCACTGGAAGACTTCAAGCTGCTGAAACTGAAAATTCCGGGCCAGGGCGAAGTGTCGCTGCGCTCGTATTTTCGCCATA
TCAAATACGCACAATCAGGCGATAACGGACGGGTGCTGTTCGGCGGCGGTCTGATCGAACAGCGATACGGGCTGGGTTTC
AAGTTCAGGTTCTTCGACCGTCTCGACGGCAAACTGGTGACGCTCTACGTGTCGCCTGCGCAGATGCAGGCCTATCGCTC
CAGCCGCTACATCAGTGAGCTGCTGAGCCATGCGGAGGACGTGAAGTTCTTCACGGTGTATGCGCTGGGAACCGTCACCC
TGAGCCCTTCAGGCAAGAGCTATAGCCTGGAGGTCGACGACTTGCGGCATCTGGCGATTGTGCTGGGGCCGGCGAAAGAG
CCGCTTGAGGAAGAAAAAACACCTGAAGCCTGA

Upstream 100 bases:

>100_bases
CCCGCCCTGCCCGCCGTTTTTCACGCCATTTCACATATTTTGTTGCAAGCGCTCTACGCCTGAAATAGCGTGTTGTCCTG
AATGTACAAGGACGATCCGC

Downstream 100 bases:

>100_bases
ACCTGTGGTCAATGATCGTTCCAGCGTTCGACGCTGGAACGATCCGGGTCAGCTCATCACACCTTGACGATCCAGCCGGC
TGGAGCCTCGATGTCACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKPSKPITRAFCVELQQELSIAAARREYFSQEPPRTRFEFLCSNEACRALGAKVTGVRYDVKPQDNPTFVAAHFRANPHY
DHSPGCEWVDEDEDDKAADPIEETDVQTRLRKAKRKLDDYIDVFDPTIKEPAKEKSGLEKAGAPVQRPPAANPPIEPATP
KVPRYSETRTNNLERLVDSYRQAKAELSLEDFKLLKLKIPGQGEVSLRSYFRHIKYAQSGDNGRVLFGGGLIEQRYGLGF
KFRFFDRLDGKLVTLYVSPAQMQAYRSSRYISELLSHAEDVKFFTVYALGTVTLSPSGKSYSLEVDDLRHLAIVLGPAKE
PLEEEKTPEA

Sequences:

>Translated_330_residues
MKPSKPITRAFCVELQQELSIAAARREYFSQEPPRTRFEFLCSNEACRALGAKVTGVRYDVKPQDNPTFVAAHFRANPHY
DHSPGCEWVDEDEDDKAADPIEETDVQTRLRKAKRKLDDYIDVFDPTIKEPAKEKSGLEKAGAPVQRPPAANPPIEPATP
KVPRYSETRTNNLERLVDSYRQAKAELSLEDFKLLKLKIPGQGEVSLRSYFRHIKYAQSGDNGRVLFGGGLIEQRYGLGF
KFRFFDRLDGKLVTLYVSPAQMQAYRSSRYISELLSHAEDVKFFTVYALGTVTLSPSGKSYSLEVDDLRHLAIVLGPAKE
PLEEEKTPEA
>Mature_330_residues
MKPSKPITRAFCVELQQELSIAAARREYFSQEPPRTRFEFLCSNEACRALGAKVTGVRYDVKPQDNPTFVAAHFRANPHY
DHSPGCEWVDEDEDDKAADPIEETDVQTRLRKAKRKLDDYIDVFDPTIKEPAKEKSGLEKAGAPVQRPPAANPPIEPATP
KVPRYSETRTNNLERLVDSYRQAKAELSLEDFKLLKLKIPGQGEVSLRSYFRHIKYAQSGDNGRVLFGGGLIEQRYGLGF
KFRFFDRLDGKLVTLYVSPAQMQAYRSSRYISELLSHAEDVKFFTVYALGTVTLSPSGKSYSLEVDDLRHLAIVLGPAKE
PLEEEKTPEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37303; Mature: 37303

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSKPITRAFCVELQQELSIAAARREYFSQEPPRTRFEFLCSNEACRALGAKVTGVRYD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHCCEEECEEEE
VKPQDNPTFVAAHFRANPHYDHSPGCEWVDEDEDDKAADPIEETDVQTRLRKAKRKLDDY
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IDVFDPTIKEPAKEKSGLEKAGAPVQRPPAANPPIEPATPKVPRYSETRTNNLERLVDSY
HHHCCCHHCCHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RQAKAELSLEDFKLLKLKIPGQGEVSLRSYFRHIKYAQSGDNGRVLFGGGLIEQRYGLGF
HHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCCE
KFRFFDRLDGKLVTLYVSPAQMQAYRSSRYISELLSHAEDVKFFTVYALGTVTLSPSGKS
EEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCE
YSLEVDDLRHLAIVLGPAKEPLEEEKTPEA
EEEEHHHHHEEEEEECCCCCCHHHCCCCCC
>Mature Secondary Structure
MKPSKPITRAFCVELQQELSIAAARREYFSQEPPRTRFEFLCSNEACRALGAKVTGVRYD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHCCEEECEEEE
VKPQDNPTFVAAHFRANPHYDHSPGCEWVDEDEDDKAADPIEETDVQTRLRKAKRKLDDY
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IDVFDPTIKEPAKEKSGLEKAGAPVQRPPAANPPIEPATPKVPRYSETRTNNLERLVDSY
HHHCCCHHCCHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RQAKAELSLEDFKLLKLKIPGQGEVSLRSYFRHIKYAQSGDNGRVLFGGGLIEQRYGLGF
HHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCCE
KFRFFDRLDGKLVTLYVSPAQMQAYRSSRYISELLSHAEDVKFFTVYALGTVTLSPSGKS
EEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCE
YSLEVDDLRHLAIVLGPAKEPLEEEKTPEA
EEEEHHHHHEEEEEECCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA