Click here to switch to the map view.

The map label for this gene is 66044157

Identifier: 66044157

GI number: 66044157

Start: 1021066

End: 1021893

Strand: Reverse

Name: 66044157

Synonym: Psyr_0902

Alternate gene names: NA

Gene position: 1021893-1021066 (Counterclockwise)

Preceding gene: 66044158

Following gene: 66044156

Centisome position: 16.77

GC content: 60.63

Gene sequence:

>828_bases
ATGGCATCGGCTCATACCACTCAAACTCCCTTCAATCGCCTCCTGCTGACCGGCGCGGCAGGCGGCCTGGGCAAGGTATT
GCGCGAAACACTGCGCCCTTACGCAAATGTGCTGCGGCTTTCCGACATTGCCGAGATGGCACCCGCTGTCGACGACCGTG
AAGAAGTTCAGGTCTGCGATCTGGCCAACAAGGATGCCGTACACCAACTGGTCGAAGGCGTCGATGCGATCGTGCATTTC
GGCGGTGTGTCGGTCGAGCGACCGTTCGAAGAGATCCTCGGTGCCAATATCTGCGGCGTGTTCCACATCTACGAAGCGGC
CCGCCGGCACGGCGTGAAACGCGTGATCTTCGCCAGTTCCAACCACGTGATCGGTTTCTACAAGCAGACCGAGACCATCG
ACGCGCACTCCCCTCGCCGTCCGGACAGCTACTACGGTCTGTCCAAGTCCTACGGCGAAGACATGGCCAGCTTCTACTTC
GATCGCTACGGCATCGAAACCGTCAGCATCCGCATCGGCTCCTCGTTTGCCGAACCGCAAAACCGCCGAATGATGAGCAC
CTGGCTGAGCTTTGGCGACCTGACCCAGTTGATCGAACGCTCGCTGTACACGCCAGACGTGGGCCACACCGTGGTCTACG
GCGTTTCGGACAACAAGACCGTGTGGTGGGACAACCGCCTGGCCAGCAAACTGGATTACACCCCGAAGGACAGCTCGGAA
GTGTTCCGCGAGAAGGTCGACGCCCAGCCGCTGCCGGCAGCCGATGACCCGGCAATGCTCTACCAGGGCGGTGCCTTTGT
CGCTTCAGGACCGTTCGGCGACCAATAA

Upstream 100 bases:

>100_bases
TTTTAGACCTTGGCCGCGTTGACAATCAGCGTATGCGGTGCCGATAATCCGGCAAGTCATACGACAACAGATGACAAAAA
TAACAATCGGGACTTCTCTC

Downstream 100 bases:

>100_bases
GCAGCGCTTTCCTCTCGCAGCACTCTGGAGACACGAACCGTCATGGATGCCGAACTGATTGTCGATGCACAGAACGCCAC
CGGCGAAAGCCCGGTCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD Dependent Epimerase/Dehydratase Family Protein; TDP-Glucose-4 6-Dehydratase-Related Protein; Sugar Epimerase/Dehydratase-Like Protein; DTDP-Glucose 4 6-Dehydratase; Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase Protein; UDP-Glucose 4-Epimerase Protein; UDP Glucose Epimerase; Epimerase; Sugar Epimerase/Dehydratase Homolog; Nucleoside-Diphosphate-Sugar Epimerases; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Dehydratase/Epimerase; Epimerase/Dehydratase; UDP-Glucose 4-Epimerase; Short Chain Dehydrogenase Family Protein; NDP-Sugar Epimerase; Nucleoside-Diphosphate-Sugar Epimerase Dehydratase Protein; NAD Dependent Epimerase/Dehydratase

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MASAHTTQTPFNRLLLTGAAGGLGKVLRETLRPYANVLRLSDIAEMAPAVDDREEVQVCDLANKDAVHQLVEGVDAIVHF
GGVSVERPFEEILGANICGVFHIYEAARRHGVKRVIFASSNHVIGFYKQTETIDAHSPRRPDSYYGLSKSYGEDMASFYF
DRYGIETVSIRIGSSFAEPQNRRMMSTWLSFGDLTQLIERSLYTPDVGHTVVYGVSDNKTVWWDNRLASKLDYTPKDSSE
VFREKVDAQPLPAADDPAMLYQGGAFVASGPFGDQ

Sequences:

>Translated_275_residues
MASAHTTQTPFNRLLLTGAAGGLGKVLRETLRPYANVLRLSDIAEMAPAVDDREEVQVCDLANKDAVHQLVEGVDAIVHF
GGVSVERPFEEILGANICGVFHIYEAARRHGVKRVIFASSNHVIGFYKQTETIDAHSPRRPDSYYGLSKSYGEDMASFYF
DRYGIETVSIRIGSSFAEPQNRRMMSTWLSFGDLTQLIERSLYTPDVGHTVVYGVSDNKTVWWDNRLASKLDYTPKDSSE
VFREKVDAQPLPAADDPAMLYQGGAFVASGPFGDQ
>Mature_274_residues
ASAHTTQTPFNRLLLTGAAGGLGKVLRETLRPYANVLRLSDIAEMAPAVDDREEVQVCDLANKDAVHQLVEGVDAIVHFG
GVSVERPFEEILGANICGVFHIYEAARRHGVKRVIFASSNHVIGFYKQTETIDAHSPRRPDSYYGLSKSYGEDMASFYFD
RYGIETVSIRIGSSFAEPQNRRMMSTWLSFGDLTQLIERSLYTPDVGHTVVYGVSDNKTVWWDNRLASKLDYTPKDSSEV
FREKVDAQPLPAADDPAMLYQGGAFVASGPFGDQ

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30476; Mature: 30345

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAHTTQTPFNRLLLTGAAGGLGKVLRETLRPYANVLRLSDIAEMAPAVDDREEVQVCD
CCCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
LANKDAVHQLVEGVDAIVHFGGVSVERPFEEILGANICGVFHIYEAARRHGVKRVIFASS
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECC
NHVIGFYKQTETIDAHSPRRPDSYYGLSKSYGEDMASFYFDRYGIETVSIRIGSSFAEPQ
CCEEEEEECCCEECCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCH
NRRMMSTWLSFGDLTQLIERSLYTPDVGHTVVYGVSDNKTVWWDNRLASKLDYTPKDSSE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCHHHHHCCCCCCCHHH
VFREKVDAQPLPAADDPAMLYQGGAFVASGPFGDQ
HHHHHHCCCCCCCCCCCCEEEECCEEEECCCCCCC
>Mature Secondary Structure 
ASAHTTQTPFNRLLLTGAAGGLGKVLRETLRPYANVLRLSDIAEMAPAVDDREEVQVCD
CCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
LANKDAVHQLVEGVDAIVHFGGVSVERPFEEILGANICGVFHIYEAARRHGVKRVIFASS
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECC
NHVIGFYKQTETIDAHSPRRPDSYYGLSKSYGEDMASFYFDRYGIETVSIRIGSSFAEPQ
CCEEEEEECCCEECCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCH
NRRMMSTWLSFGDLTQLIERSLYTPDVGHTVVYGVSDNKTVWWDNRLASKLDYTPKDSSE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCHHHHHCCCCCCCHHH
VFREKVDAQPLPAADDPAMLYQGGAFVASGPFGDQ
HHHHHHCCCCCCCCCCCCEEEECCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA