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The map label for this gene is 66044156

Identifier: 66044156

GI number: 66044156

Start: 1020139

End: 1021023

Strand: Reverse

Name: 66044156

Synonym: Psyr_0901

Alternate gene names: NA

Gene position: 1021023-1020139 (Counterclockwise)

Preceding gene: 66044157

Following gene: 66044155

Centisome position: 16.76

GC content: 63.84

Gene sequence:

>885_bases
ATGGATGCCGAACTGATTGTCGATGCACAGAACGCCACCGGCGAAAGCCCGGTCTGGAGCGTGCGTGATCAAGCGCTGTA
CTGGGTGGATATTCCCAAGGGCGAGCTGCATCGCTGGGACTTCAATCAGGACAGCACGCGCAGCTGGAAAGCGCCGCAAA
TGCTCGCCTGTATCGCCGCCGACAGCCGGGGTGGCTGGGTGGCGGGGATGGAGAACGGAATCTTCCATTTGCAGCCCTGC
GAAGACGGCAGCCTGATCAGCACGCTTCTGGCCGGCGTCGAACACGCGCAGACAGGCATGCGCTTCAATGACGGCCGCTG
CGACCGACAGGGTCGGTTCTGGGCGGGCACCATGTTCATGGACATGGCCGCCGGTGCGAGGGTGGGTGCGTTGTATCGCT
ACAGTGCCGGCCAGAAGACACTGGACGCACAGCTCAAGGATTTCATCGTCCCCAACGGCCTGGCGTTCAGCCCCGACGGC
AAGGTCATGTACCTGTCCGACTCGCACCCCAGCGTGCAGCAGATCTGGGCGTTCGATTACGACACCGACAGCGGCACGCC
ACACAATCGCCGCCTGTTCGTCGACATGAACCATCACCTGGGTCGCCCTGACGGCGCAGCGATCGACGCCGACGGCTGCT
ACTGGATCTGTGGCAACGACGCAGGCCTGGTTCACCGCTTCACTCCCACCGGCAAACTCGACCGCTCGCTGGTCGTGCCG
GTGAAAAAGCCAGCCATGTGTGCCTTTGGCGGCCCCAATCTGGACACCCTGTTCGTGACGTCGATTCGCCCGGGTGGCGA
CATCGGCGATCAGCCGCTGGCCGGTGGCGTTTTCGCCCTGCGACCTGGCGTGCAGGGCCTGGAGGAACCCACGTTTCAGG
GCTGA

Upstream 100 bases:

>100_bases
GGCAATGCTCTACCAGGGCGGTGCCTTTGTCGCTTCAGGACCGTTCGGCGACCAATAAGCAGCGCTTTCCTCTCGCAGCA
CTCTGGAGACACGAACCGTC

Downstream 100 bases:

>100_bases
CAGCGCCCTACCGAAAATCCCGTAGCTCGACCAAAAATAACAAAATCGGAGATATCCATGGATTTCAAACGCAAGCTCCT
CATCGCAGCACTTCCGCTGG

Product: senescence marker protein-30 (SMP-30)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MDAELIVDAQNATGESPVWSVRDQALYWVDIPKGELHRWDFNQDSTRSWKAPQMLACIAADSRGGWVAGMENGIFHLQPC
EDGSLISTLLAGVEHAQTGMRFNDGRCDRQGRFWAGTMFMDMAAGARVGALYRYSAGQKTLDAQLKDFIVPNGLAFSPDG
KVMYLSDSHPSVQQIWAFDYDTDSGTPHNRRLFVDMNHHLGRPDGAAIDADGCYWICGNDAGLVHRFTPTGKLDRSLVVP
VKKPAMCAFGGPNLDTLFVTSIRPGGDIGDQPLAGGVFALRPGVQGLEEPTFQG

Sequences:

>Translated_294_residues
MDAELIVDAQNATGESPVWSVRDQALYWVDIPKGELHRWDFNQDSTRSWKAPQMLACIAADSRGGWVAGMENGIFHLQPC
EDGSLISTLLAGVEHAQTGMRFNDGRCDRQGRFWAGTMFMDMAAGARVGALYRYSAGQKTLDAQLKDFIVPNGLAFSPDG
KVMYLSDSHPSVQQIWAFDYDTDSGTPHNRRLFVDMNHHLGRPDGAAIDADGCYWICGNDAGLVHRFTPTGKLDRSLVVP
VKKPAMCAFGGPNLDTLFVTSIRPGGDIGDQPLAGGVFALRPGVQGLEEPTFQG
>Mature_294_residues
MDAELIVDAQNATGESPVWSVRDQALYWVDIPKGELHRWDFNQDSTRSWKAPQMLACIAADSRGGWVAGMENGIFHLQPC
EDGSLISTLLAGVEHAQTGMRFNDGRCDRQGRFWAGTMFMDMAAGARVGALYRYSAGQKTLDAQLKDFIVPNGLAFSPDG
KVMYLSDSHPSVQQIWAFDYDTDSGTPHNRRLFVDMNHHLGRPDGAAIDADGCYWICGNDAGLVHRFTPTGKLDRSLVVP
VKKPAMCAFGGPNLDTLFVTSIRPGGDIGDQPLAGGVFALRPGVQGLEEPTFQG

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=307, Percent_Identity=33.5504885993485, Blast_Score=142, Evalue=3e-34,
Organism=Homo sapiens, GI4759036, Length=307, Percent_Identity=33.5504885993485, Blast_Score=142, Evalue=3e-34,
Organism=Drosophila melanogaster, GI45551448, Length=278, Percent_Identity=28.0575539568345, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24641471, Length=278, Percent_Identity=28.0575539568345, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI18860103, Length=278, Percent_Identity=28.0575539568345, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24641469, Length=278, Percent_Identity=28.0575539568345, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24646912, Length=287, Percent_Identity=28.5714285714286, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24646910, Length=287, Percent_Identity=28.5714285714286, Blast_Score=107, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 32050; Mature: 32050

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAELIVDAQNATGESPVWSVRDQALYWVDIPKGELHRWDFNQDSTRSWKAPQMLACIAA
CCCEEEEECCCCCCCCCEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEEE
DSRGGWVAGMENGIFHLQPCEDGSLISTLLAGVEHAQTGMRFNDGRCDRQGRFWAGTMFM
CCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEEEHEEE
DMAAGARVGALYRYSAGQKTLDAQLKDFIVPNGLAFSPDGKVMYLSDSHPSVQQIWAFDY
HHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCCEEEEEEEC
DTDSGTPHNRRLFVDMNHHLGRPDGAAIDADGCYWICGNDAGLVHRFTPTGKLDRSLVVP
CCCCCCCCCCEEEEECCCCCCCCCCCEEECCCEEEEECCCCCEEEEECCCCCCCCEEEEE
VKKPAMCAFGGPNLDTLFVTSIRPGGDIGDQPLAGGVFALRPGVQGLEEPTFQG
CCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MDAELIVDAQNATGESPVWSVRDQALYWVDIPKGELHRWDFNQDSTRSWKAPQMLACIAA
CCCEEEEECCCCCCCCCEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEEE
DSRGGWVAGMENGIFHLQPCEDGSLISTLLAGVEHAQTGMRFNDGRCDRQGRFWAGTMFM
CCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEEEHEEE
DMAAGARVGALYRYSAGQKTLDAQLKDFIVPNGLAFSPDGKVMYLSDSHPSVQQIWAFDY
HHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCCEEEEEEEC
DTDSGTPHNRRLFVDMNHHLGRPDGAAIDADGCYWICGNDAGLVHRFTPTGKLDRSLVVP
CCCCCCCCCCEEEEECCCCCCCCCCCEEECCCEEEEECCCCCEEEEECCCCCCCCEEEEE
VKKPAMCAFGGPNLDTLFVTSIRPGGDIGDQPLAGGVFALRPGVQGLEEPTFQG
CCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA