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The map label for this gene is ynfM [H]

Identifier: 66043687

GI number: 66043687

Start: 459036

End: 460304

Strand: Reverse

Name: ynfM [H]

Synonym: Psyr_0420

Alternate gene names: 66043687

Gene position: 460304-459036 (Counterclockwise)

Preceding gene: 66043689

Following gene: 66043686

Centisome position: 7.55

GC content: 62.96

Gene sequence:

>1269_bases
GTGAACCCTGCCGTTGCCCCGCCCACCCCCGACTTGAACACCTCGTCCGTACAGTCGTCGACACTGCCGGGCGATACCTA
CATCGAGAAGAACACGCCACTGTTCAAACGCACTGCACTGGCGCTGTTCGCTGGCGGGTTTTCGACTTTTACCCTGCTGT
ACTGCGTTCAGCCGATGATGCCCACGCTGTCCAGCGAGTTCTCCCTGACTGCGGCACAAAGCAGCCTGATCCTGTCCGTC
GCCACAGCAATGCTCGCCATCGGCCTGCTGATCACCGGGCCGATATCCGATCGGCTGGGGCGCAAGCCGGTGATGGTCAT
GGCGCTGTTCTGTGCCTCGCTGTTCACCATCGCCAGCGCCTTGATGCCCAGCTGGGAGGGCGTGCTGATTACCCGAGCTC
TTGTAGGTCTTTCGTTGAGCGGCCTGGCGGCAGTGGCGATGACCTACCTGAGCGAGGAGATCCACCCCACCCATCTGGGC
CTGGCGATGGGGCTGTATATCGGCGGCAGCGCCGTCGGTGGCATGAGCGGAAGGCTGATCGTCGGGGTGATGATCGATTA
TGTCAGCTGGCACGCGGCGATGCTGGTGGTCGGCGGGCTGGCGCTGATCGCCGCAGCGGTGTTCTGGAAGATCCTGCCGG
CGTCACGCAACTTCCGCCCGCGCTCGCTGCACCCTCGCAGTCTGCTCGACGGCTTTGTCGTGCAGTTTCGCGATGCAGGC
CTGCCGCTGCTGTTTCTGACCGGTTTTCTGCTGATGGGCGCATTCGTTACGCTGTTCAACTACATCGCCTACCGCTTTCT
GAGCGCCCCCTACAACCTGAGCCAGGCCGTGGTCGGTGTGTTTTCCGTGGTGTACCTGTCGGGCATCTACAGTTCAGCAA
AGATCGGCTCGCTGGCTGACCGCCTAGGCCGCCGACAGGTGCTCTGGGCCGTGATCGTGATGATGCTGGCCGGCCTGCTG
CTGACCCTGTTCACCCCACTGCCACTGGTGATCGTCGGTGTGCTGATCTTCACCTTCGGCTTCTTCGGCGCACATTCAGT
GGCCAGCAGTTGGGTCGGACGCAGGGCCACCACCGCCAGAGGCCAGGCCGCGTCCCTGTACCTGTTCTGTTACTACGCAG
GTTCGAGCGTGGCCGGCACCGGCGGCGGCGTGTTCTGGCACTACGCAGGCTGGAACGGTATCGGGGTGTTTATAGGCGTG
TTGCTGCTGATCGCCCTTGGTGTGGCGTTGAGGTTGGCAAGGTTGCAGCCGCTGGGGTCGCAGGTTTAG

Upstream 100 bases:

>100_bases
TCGTTTTACCTATCAAACAGGTCGAACAATATATTGGATGGAATGATTAGCGAGCTATATGATTTTTTCATTGCCTGCTC
AACCGTGCCCCGAGGTCTTT

Downstream 100 bases:

>100_bases
TCACACATAGGGCGATGGCGCATAGGGTTAGCCAAGGTACACTGGCGCATCCGCCAGTTCTGGTAAAGGAAACCGACATG
CGCCTCGACCGCCTCCACCT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MNPAVAPPTPDLNTSSVQSSTLPGDTYIEKNTPLFKRTALALFAGGFSTFTLLYCVQPMMPTLSSEFSLTAAQSSLILSV
ATAMLAIGLLITGPISDRLGRKPVMVMALFCASLFTIASALMPSWEGVLITRALVGLSLSGLAAVAMTYLSEEIHPTHLG
LAMGLYIGGSAVGGMSGRLIVGVMIDYVSWHAAMLVVGGLALIAAAVFWKILPASRNFRPRSLHPRSLLDGFVVQFRDAG
LPLLFLTGFLLMGAFVTLFNYIAYRFLSAPYNLSQAVVGVFSVVYLSGIYSSAKIGSLADRLGRRQVLWAVIVMMLAGLL
LTLFTPLPLVIVGVLIFTFGFFGAHSVASSWVGRRATTARGQAASLYLFCYYAGSSVAGTGGGVFWHYAGWNGIGVFIGV
LLLIALGVALRLARLQPLGSQV

Sequences:

>Translated_422_residues
MNPAVAPPTPDLNTSSVQSSTLPGDTYIEKNTPLFKRTALALFAGGFSTFTLLYCVQPMMPTLSSEFSLTAAQSSLILSV
ATAMLAIGLLITGPISDRLGRKPVMVMALFCASLFTIASALMPSWEGVLITRALVGLSLSGLAAVAMTYLSEEIHPTHLG
LAMGLYIGGSAVGGMSGRLIVGVMIDYVSWHAAMLVVGGLALIAAAVFWKILPASRNFRPRSLHPRSLLDGFVVQFRDAG
LPLLFLTGFLLMGAFVTLFNYIAYRFLSAPYNLSQAVVGVFSVVYLSGIYSSAKIGSLADRLGRRQVLWAVIVMMLAGLL
LTLFTPLPLVIVGVLIFTFGFFGAHSVASSWVGRRATTARGQAASLYLFCYYAGSSVAGTGGGVFWHYAGWNGIGVFIGV
LLLIALGVALRLARLQPLGSQV
>Mature_422_residues
MNPAVAPPTPDLNTSSVQSSTLPGDTYIEKNTPLFKRTALALFAGGFSTFTLLYCVQPMMPTLSSEFSLTAAQSSLILSV
ATAMLAIGLLITGPISDRLGRKPVMVMALFCASLFTIASALMPSWEGVLITRALVGLSLSGLAAVAMTYLSEEIHPTHLG
LAMGLYIGGSAVGGMSGRLIVGVMIDYVSWHAAMLVVGGLALIAAAVFWKILPASRNFRPRSLHPRSLLDGFVVQFRDAG
LPLLFLTGFLLMGAFVTLFNYIAYRFLSAPYNLSQAVVGVFSVVYLSGIYSSAKIGSLADRLGRRQVLWAVIVMMLAGLL
LTLFTPLPLVIVGVLIFTFGFFGAHSVASSWVGRRATTARGQAASLYLFCYYAGSSVAGTGGGVFWHYAGWNGIGVFIGV
LLLIALGVALRLARLQPLGSQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=407, Percent_Identity=57.985257985258, Blast_Score=466, Evalue=1e-133,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44723; Mature: 44723

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPAVAPPTPDLNTSSVQSSTLPGDTYIEKNTPLFKRTALALFAGGFSTFTLLYCVQPMM
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
PTLSSEFSLTAAQSSLILSVATAMLAIGLLITGPISDRLGRKPVMVMALFCASLFTIASA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHH
LMPSWEGVLITRALVGLSLSGLAAVAMTYLSEEIHPTHLGLAMGLYIGGSAVGGMSGRLI
HCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHH
VGVMIDYVSWHAAMLVVGGLALIAAAVFWKILPASRNFRPRSLHPRSLLDGFVVQFRDAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC
LPLLFLTGFLLMGAFVTLFNYIAYRFLSAPYNLSQAVVGVFSVVYLSGIYSSAKIGSLAD
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLGRRQVLWAVIVMMLAGLLLTLFTPLPLVIVGVLIFTFGFFGAHSVASSWVGRRATTAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GQAASLYLFCYYAGSSVAGTGGGVFWHYAGWNGIGVFIGVLLLIALGVALRLARLQPLGS
CCCEEEEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QV
CC
>Mature Secondary Structure
MNPAVAPPTPDLNTSSVQSSTLPGDTYIEKNTPLFKRTALALFAGGFSTFTLLYCVQPMM
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
PTLSSEFSLTAAQSSLILSVATAMLAIGLLITGPISDRLGRKPVMVMALFCASLFTIASA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHH
LMPSWEGVLITRALVGLSLSGLAAVAMTYLSEEIHPTHLGLAMGLYIGGSAVGGMSGRLI
HCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHH
VGVMIDYVSWHAAMLVVGGLALIAAAVFWKILPASRNFRPRSLHPRSLLDGFVVQFRDAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC
LPLLFLTGFLLMGAFVTLFNYIAYRFLSAPYNLSQAVVGVFSVVYLSGIYSSAKIGSLAD
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLGRRQVLWAVIVMMLAGLLLTLFTPLPLVIVGVLIFTFGFFGAHSVASSWVGRRATTAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GQAASLYLFCYYAGSSVAGTGGGVFWHYAGWNGIGVFIGVLLLIALGVALRLARLQPLGS
CCCEEEEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]