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The map label for this gene is recF [C]

Identifier: 66043686

GI number: 66043686

Start: 457693

End: 458958

Strand: Reverse

Name: recF [C]

Synonym: Psyr_0419

Alternate gene names: 66043686

Gene position: 458958-457693 (Counterclockwise)

Preceding gene: 66043687

Following gene: 66043685

Centisome position: 7.53

GC content: 54.11

Gene sequence:

>1266_bases
ATGCGCCTCGACCGCCTCCACCTGCAGAATTTTCGTTGCTACGAAGATGCTCATTTCGACTTCCAGCCTGGGTTCAATCT
GGTGGTGGGGGTTAATGGCAGTGGGAAGACGTCGTTATTGCTGGGGGTGGCGGGATGCTTCGGGAATCTACTTGGAAGCA
TTGGCGTCCATCGACCATCGATAGCCGAGTCCGATGTTCGGTTCGAGTTAGTAAAGTTCGAAGACAGGATTCGTTTTGAG
CGCAGCTATCCTCTTGTGTTGACTGCCCAAGGTGGCGCGTTTGAGCATCAGGAATGGCACGTATCGCTAGAACGCAGCAG
TCTTCAGACAAATTTTAGCGCGCTGAACAGTCTCGTATTTTCGGAAAATCTGATCAGCATCGACGGCGCTACTCACGGGG
ATTTGCCTGTATTCGCCGTCTATCAAGCCAATCGACGCTGGCTGACGATGAGTGTAACCGCTGAGCATGCTGCACAGAGC
AAACCATCAAGACTGGATGCCTACACCTCTTGGTTCGATGCCGCTTCCAACTTGAAAAACTTCGAGACCTGGTTCATCGG
CAAGACACTGGAGCGCTTTCAAAGACTGGCCAGAACGGGTTTCCCTGGCATTCTCACCGACGAACTCACCTGGATCAATT
CAGCTATCCAGTGCGCACTGCCGGAGTCCAAGGGCATAGAGTACGACATGGAAATGCGGGGGCTGATGGTGGACATTGAT
GACCGAAAAACCCCGTTCAACGACCTGAGCGACGGGCAACGCGGAATGGTCGCCCTCTTCGCCGATATTGCCCGCCGTAT
CTGCCTGCTAAATCCGCACATGGGGAAGGATGTTCTAAGCAAGACAAACGGCATCATCGTGATCGATGAACTGGACATCC
ACCTTCACCCCGGCTGGCAACGCACCATTGCACCCGCGCTGAAAAAAGCATTTCCCAGCATTCAGTTCATCGCTGCCAGC
CACTCGCCACAGGTCATCGGCAGCCTGCAACCGGGCGAGGTCATCCTGCTGAATAACCATGACGGCTCTCACCCAAGAGC
AACCTACGGCCTGGACTCCAGCAGCATTCTGGAAGAAGTCATGGGCGTGCCTCAGCGTGAGCCTGAAATTGAAGAGTTGC
TCGATCAGCTATTCAGCACTCTGGAAAACAACGAGCTTGAAAAAGCCAGGTCGCAGCTTGATGCACTGAAGAAGAAGGCG
CCCGATCTACCAGAGTTCGCGGGTGCCGAGGCGCTACTCAAACGCAAGGAGATCATTGGACGATGA

Upstream 100 bases:

>100_bases
AGCCGCTGGGGTCGCAGGTTTAGTCACACATAGGGCGATGGCGCATAGGGTTAGCCAAGGTACACTGGCGCATCCGCCAG
TTCTGGTAAAGGAAACCGAC

Downstream 100 bases:

>100_bases
GACGCATCATCAAAGGAACTGAGCCTGCGTCATTCACCGAATGGAAAGCCAGTGCAAACGAAGACTGGACGCCCACTTAT
CCAACCTTGCAGAACCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: SMC Domain-Containing Protein; SMC Domain Protein; AAA ATPase; ABC Transporter; Antigen PgaA; RecF/RecN/SMC N Terminal Domain; PgaA Protein; RecF/RecN/SMC Family Protein

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MRLDRLHLQNFRCYEDAHFDFQPGFNLVVGVNGSGKTSLLLGVAGCFGNLLGSIGVHRPSIAESDVRFELVKFEDRIRFE
RSYPLVLTAQGGAFEHQEWHVSLERSSLQTNFSALNSLVFSENLISIDGATHGDLPVFAVYQANRRWLTMSVTAEHAAQS
KPSRLDAYTSWFDAASNLKNFETWFIGKTLERFQRLARTGFPGILTDELTWINSAIQCALPESKGIEYDMEMRGLMVDID
DRKTPFNDLSDGQRGMVALFADIARRICLLNPHMGKDVLSKTNGIIVIDELDIHLHPGWQRTIAPALKKAFPSIQFIAAS
HSPQVIGSLQPGEVILLNNHDGSHPRATYGLDSSSILEEVMGVPQREPEIEELLDQLFSTLENNELEKARSQLDALKKKA
PDLPEFAGAEALLKRKEIIGR

Sequences:

>Translated_421_residues
MRLDRLHLQNFRCYEDAHFDFQPGFNLVVGVNGSGKTSLLLGVAGCFGNLLGSIGVHRPSIAESDVRFELVKFEDRIRFE
RSYPLVLTAQGGAFEHQEWHVSLERSSLQTNFSALNSLVFSENLISIDGATHGDLPVFAVYQANRRWLTMSVTAEHAAQS
KPSRLDAYTSWFDAASNLKNFETWFIGKTLERFQRLARTGFPGILTDELTWINSAIQCALPESKGIEYDMEMRGLMVDID
DRKTPFNDLSDGQRGMVALFADIARRICLLNPHMGKDVLSKTNGIIVIDELDIHLHPGWQRTIAPALKKAFPSIQFIAAS
HSPQVIGSLQPGEVILLNNHDGSHPRATYGLDSSSILEEVMGVPQREPEIEELLDQLFSTLENNELEKARSQLDALKKKA
PDLPEFAGAEALLKRKEIIGR
>Mature_421_residues
MRLDRLHLQNFRCYEDAHFDFQPGFNLVVGVNGSGKTSLLLGVAGCFGNLLGSIGVHRPSIAESDVRFELVKFEDRIRFE
RSYPLVLTAQGGAFEHQEWHVSLERSSLQTNFSALNSLVFSENLISIDGATHGDLPVFAVYQANRRWLTMSVTAEHAAQS
KPSRLDAYTSWFDAASNLKNFETWFIGKTLERFQRLARTGFPGILTDELTWINSAIQCALPESKGIEYDMEMRGLMVDID
DRKTPFNDLSDGQRGMVALFADIARRICLLNPHMGKDVLSKTNGIIVIDELDIHLHPGWQRTIAPALKKAFPSIQFIAAS
HSPQVIGSLQPGEVILLNNHDGSHPRATYGLDSSSILEEVMGVPQREPEIEELLDQLFSTLENNELEKARSQLDALKKKA
PDLPEFAGAEALLKRKEIIGR

Specific function: The Recf Protein Is Involved In DNA Metabolism; It Is Required For DNA Replication And Normal Sos Inducibility. Recf Binds Preferentially To Single-Stranded, Linear DNA. It Also Seems To Bind ATP. [C]

COG id: COG3950

COG function: function code R; Predicted ATP-binding protein involved in virulence

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47057; Mature: 47057

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDRLHLQNFRCYEDAHFDFQPGFNLVVGVNGSGKTSLLLGVAGCFGNLLGSIGVHRPS
CCCCHHHHCCCEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC
IAESDVRFELVKFEDRIRFERSYPLVLTAQGGAFEHQEWHVSLERSSLQTNFSALNSLVF
CCCCCCEEEEEEHHHHHHEECCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH
SENLISIDGATHGDLPVFAVYQANRRWLTMSVTAEHAAQSKPSRLDAYTSWFDAASNLKN
HCCEEEECCCCCCCCCEEEEEECCCEEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCC
FETWFIGKTLERFQRLARTGFPGILTDELTWINSAIQCALPESKGIEYDMEMRGLMVDID
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEECCCCCCCEEEEECCCEEEEEC
DRKTPFNDLSDGQRGMVALFADIARRICLLNPHMGKDVLSKTNGIIVIDELDIHLHPGWQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEEEEEECCCHH
RTIAPALKKAFPSIQFIAASHSPQVIGSLQPGEVILLNNHDGSHPRATYGLDSSSILEEV
HHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCEEEEECCCCCCCCEEECCCHHHHHHHH
MGVPQREPEIEELLDQLFSTLENNELEKARSQLDALKKKAPDLPEFAGAEALLKRKEIIG
HCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHC
R
C
>Mature Secondary Structure
MRLDRLHLQNFRCYEDAHFDFQPGFNLVVGVNGSGKTSLLLGVAGCFGNLLGSIGVHRPS
CCCCHHHHCCCEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC
IAESDVRFELVKFEDRIRFERSYPLVLTAQGGAFEHQEWHVSLERSSLQTNFSALNSLVF
CCCCCCEEEEEEHHHHHHEECCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH
SENLISIDGATHGDLPVFAVYQANRRWLTMSVTAEHAAQSKPSRLDAYTSWFDAASNLKN
HCCEEEECCCCCCCCCEEEEEECCCEEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCC
FETWFIGKTLERFQRLARTGFPGILTDELTWINSAIQCALPESKGIEYDMEMRGLMVDID
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEECCCCCCCEEEEECCCEEEEEC
DRKTPFNDLSDGQRGMVALFADIARRICLLNPHMGKDVLSKTNGIIVIDELDIHLHPGWQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEEEEEECCCHH
RTIAPALKKAFPSIQFIAASHSPQVIGSLQPGEVILLNNHDGSHPRATYGLDSSSILEEV
HHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCEEEEECCCCCCCCEEECCCHHHHHHHH
MGVPQREPEIEELLDQLFSTLENNELEKARSQLDALKKKAPDLPEFAGAEALLKRKEIIG
HCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA