Click here to switch to the map view.

The map label for this gene is 66043685

Identifier: 66043685

GI number: 66043685

Start: 457049

End: 457696

Strand: Reverse

Name: 66043685

Synonym: Psyr_0418

Alternate gene names: NA

Gene position: 457696-457049 (Counterclockwise)

Preceding gene: 66043686

Following gene: 66043684

Centisome position: 7.51

GC content: 54.17

Gene sequence:

>648_bases
ATGAGACGCATCATCAAAGGAACTGAGCCTGCGTCATTCACCGAATGGAAAGCCAGTGCAAACGAAGACTGGACGCCCAC
TTATCCAACCTTGCAGAACCCGCAAAAACGCGACCTGCATGATCGCCTGCTGCAAGAGCAGAACTTCTCATGCTGCTATT
GCGGCAGGGAAATAGAACTTGATAGCAGTCACATCGAACATTTCAGACCGCAGGATCATTATCTGCCATTGGCACTGGAG
TTCAGCAATCTTCATGCGTCCTGCCTGCGCGAGACCACACCAGGAAGCCCGTTGCACTGCGGCCACTACAAGGGCAACTG
GTTCGATGAAGACCTGCACATCTCTCCGACAGAGGACGATTGCGAACAGCGCTTCCGTTACTTGCTGACAGGGAAAATCC
AGAGCACATCCCACACCGACCTTCCCGCCACGACGATGATCGAAAAGCTCGCACTCGATATCGCGTATCTGACCAAAAGA
CGTCAGGAGGCCATCACGGGTGTGTTCGATGAACAGTTCATATCCAGCGCCAGCGATGCGGAACTCGCTAACCTTGTAGA
CAGCCTGCGCTCGGGCACCGCTAATACCTCTATTGCTTTCGGCCATGTCGTTGCGCGCTATGCGGAGCAATTGCTGACGC
AGCGGTAG

Upstream 100 bases:

>100_bases
AAGCCAGGTCGCAGCTTGATGCACTGAAGAAGAAGGCGCCCGATCTACCAGAGTTCGCGGGTGCCGAGGCGCTACTCAAA
CGCAAGGAGATCATTGGACG

Downstream 100 bases:

>100_bases
GCCGCGCCTCAGCGCCTCTCTCCCATTAGCGAGGCACGACCCAAAAAAGAAAATTATTTTCATATATTTGTTTGTATTTC
ATTTTCGTGTAATTTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MRRIIKGTEPASFTEWKASANEDWTPTYPTLQNPQKRDLHDRLLQEQNFSCCYCGREIELDSSHIEHFRPQDHYLPLALE
FSNLHASCLRETTPGSPLHCGHYKGNWFDEDLHISPTEDDCEQRFRYLLTGKIQSTSHTDLPATTMIEKLALDIAYLTKR
RQEAITGVFDEQFISSASDAELANLVDSLRSGTANTSIAFGHVVARYAEQLLTQR

Sequences:

>Translated_215_residues
MRRIIKGTEPASFTEWKASANEDWTPTYPTLQNPQKRDLHDRLLQEQNFSCCYCGREIELDSSHIEHFRPQDHYLPLALE
FSNLHASCLRETTPGSPLHCGHYKGNWFDEDLHISPTEDDCEQRFRYLLTGKIQSTSHTDLPATTMIEKLALDIAYLTKR
RQEAITGVFDEQFISSASDAELANLVDSLRSGTANTSIAFGHVVARYAEQLLTQR
>Mature_215_residues
MRRIIKGTEPASFTEWKASANEDWTPTYPTLQNPQKRDLHDRLLQEQNFSCCYCGREIELDSSHIEHFRPQDHYLPLALE
FSNLHASCLRETTPGSPLHCGHYKGNWFDEDLHISPTEDDCEQRFRYLLTGKIQSTSHTDLPATTMIEKLALDIAYLTKR
RQEAITGVFDEQFISSASDAELANLVDSLRSGTANTSIAFGHVVARYAEQLLTQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24561; Mature: 24561

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS00028 ZINC_FINGER_C2H2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIIKGTEPASFTEWKASANEDWTPTYPTLQNPQKRDLHDRLLQEQNFSCCYCGREIEL
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCEEEC
DSSHIEHFRPQDHYLPLALEFSNLHASCLRETTPGSPLHCGHYKGNWFDEDLHISPTEDD
CHHHHHHCCCCCCEEEEEEEHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCHHH
CEQRFRYLLTGKIQSTSHTDLPATTMIEKLALDIAYLTKRRQEAITGVFDEQFISSASDA
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ELANLVDSLRSGTANTSIAFGHVVARYAEQLLTQR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRIIKGTEPASFTEWKASANEDWTPTYPTLQNPQKRDLHDRLLQEQNFSCCYCGREIEL
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCEEEC
DSSHIEHFRPQDHYLPLALEFSNLHASCLRETTPGSPLHCGHYKGNWFDEDLHISPTEDD
CHHHHHHCCCCCCEEEEEEEHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCHHH
CEQRFRYLLTGKIQSTSHTDLPATTMIEKLALDIAYLTKRRQEAITGVFDEQFISSASDA
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ELANLVDSLRSGTANTSIAFGHVVARYAEQLLTQR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA