| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is gntP [H]
Identifier: 66043684
GI number: 66043684
Start: 455430
End: 456779
Strand: Reverse
Name: gntP [H]
Synonym: Psyr_0417
Alternate gene names: 66043684
Gene position: 456779-455430 (Counterclockwise)
Preceding gene: 66043685
Following gene: 66043683
Centisome position: 7.5
GC content: 61.7
Gene sequence:
>1350_bases ATGTCGCCGTCACCCGGTATTTCGCTATTGGTCTACGCCGCTGTCGCCATCATCGCCTTGATCGTGCTGATCGCGCGTTA CCGCCTCAATCCGTTTATCGTCATCACGCTTGTTTCGGTCGGTCTGGCACTGGTTGCGGGAATGCCGGCCAGTGGCGTGG TCGCCTCTTATGAAGCGGGGGTTGGCAAAACGCTGGGGCATATCGCGCTGGTCGTGGCGCTGGGCACCATGCTCGGCAAG ATGATGGCCGAGTCTGGCGGCGCCGAGCAGGTGGCGCGCACCCTGATCGATCGCTTTGGCGAACGTAACGCGCACTGGGC CATGGTCTGCATTGCGTTTCTGGTGGGCTTGCCACTGTTTTTCGAAGTGGGCTTTGTGCTGCTGGTGCCGATTGCCTTTA CCGTAGCGCGCCGTGTCGGGGTGTCGATTCTGATGGTCGGCCTGCCGATGGTCGCCGGTCTTTCGGTGGTGCATGCGCTG GTGCCGCCGCACCCTGCTGCGATGCTCGCGGTGCAGGCGTATCAGGCGTCGGTAGGACAAACGCTGTTCTACGCCATTCT GATCGGCATCCCCACGGCCATCATCGCCGGTCCGGTGTATGCCAAATTCATTGTCCCGCGCATCCACCTGCCGGCTGAAA ACCCTTTGGCCAAGCAGTTTCTCGACCGCGAGCCACGCCAGAAGCTGCCCAGCTTCGGCCTGACCATGGCCACGATTCTG CTGCCGGTGGTGCTGATGCTGCTGGGTGGCTGGGCCAACCTGATCAGTACACCGGGTAGCGCGTTCAACAGCTTTCTGCT GTTCATCGGTAACTCGGTGATTGCCCTGCTGCTGGCCACCCTGCTGAGCTTCTGGACGCTGGGCATCGCGCAGGGCTTCA ACCGCGACTCTATCCTGAAATTCACCAACGAGTGCCTGGCACCGACCGCCAGCATCACGTTGCTGGTAGGTGCCGGTGGC GGCTTGAACCGCATTCTGATCGACAGCGGCGTGACCAATGAGATCGTCGGCCTGGCGCAGGACTTTCATCTGTCGCCCCT GCTGATGGGCTGGCTGTTCGCGGCACTGATGCGCGTTGCCACCGGCTCGGCGACGGTGGCGATGACCACGGCATCGGGCA TCGTTGCACCTGTGGCGATGGGGCTGGGTTATCCACACCCCGAACTGCTGGTGCTGGCGACGGGTGCAGGCTCGGTGATC TTTTCCCACGTCAACGACGGTGGGTTCTGGCTTATCAAGGAGTATTTCAACATGACCGTTGCGCAAACGTTCAAGACCTG GACGGTCTTGGAGACGCTGATTTCCGTCGTCGCTTTCGCCCTGACGCTGGGCCTGGCGCAGGTGCTTTGA
Upstream 100 bases:
>100_bases TGCGTCATCCCTGCCGAGTACTCCCGAGTCGCCTTCAGGCTGACAGCTTCAGCTGTTGGTGTTGCGCCCTCGCCTACCCA CTTTGCAAGGAATCGTCGCT
Downstream 100 bases:
>100_bases GTGGACATTCTGTACCAGATACGTGCCCGTCAGGATTCCTTCAGTGCGGGAGAAGGCCGAATCGCCAGGCTGTTGCTCAG CGATATCGCCTTCGCGGCCA
Product: gluconate transporter
Products: Proton [Cytoplasm]; gluconate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MSPSPGISLLVYAAVAIIALIVLIARYRLNPFIVITLVSVGLALVAGMPASGVVASYEAGVGKTLGHIALVVALGTMLGK MMAESGGAEQVARTLIDRFGERNAHWAMVCIAFLVGLPLFFEVGFVLLVPIAFTVARRVGVSILMVGLPMVAGLSVVHAL VPPHPAAMLAVQAYQASVGQTLFYAILIGIPTAIIAGPVYAKFIVPRIHLPAENPLAKQFLDREPRQKLPSFGLTMATIL LPVVLMLLGGWANLISTPGSAFNSFLLFIGNSVIALLLATLLSFWTLGIAQGFNRDSILKFTNECLAPTASITLLVGAGG GLNRILIDSGVTNEIVGLAQDFHLSPLLMGWLFAALMRVATGSATVAMTTASGIVAPVAMGLGYPHPELLVLATGAGSVI FSHVNDGGFWLIKEYFNMTVAQTFKTWTVLETLISVVAFALTLGLAQVL
Sequences:
>Translated_449_residues MSPSPGISLLVYAAVAIIALIVLIARYRLNPFIVITLVSVGLALVAGMPASGVVASYEAGVGKTLGHIALVVALGTMLGK MMAESGGAEQVARTLIDRFGERNAHWAMVCIAFLVGLPLFFEVGFVLLVPIAFTVARRVGVSILMVGLPMVAGLSVVHAL VPPHPAAMLAVQAYQASVGQTLFYAILIGIPTAIIAGPVYAKFIVPRIHLPAENPLAKQFLDREPRQKLPSFGLTMATIL LPVVLMLLGGWANLISTPGSAFNSFLLFIGNSVIALLLATLLSFWTLGIAQGFNRDSILKFTNECLAPTASITLLVGAGG GLNRILIDSGVTNEIVGLAQDFHLSPLLMGWLFAALMRVATGSATVAMTTASGIVAPVAMGLGYPHPELLVLATGAGSVI FSHVNDGGFWLIKEYFNMTVAQTFKTWTVLETLISVVAFALTLGLAQVL >Mature_448_residues SPSPGISLLVYAAVAIIALIVLIARYRLNPFIVITLVSVGLALVAGMPASGVVASYEAGVGKTLGHIALVVALGTMLGKM MAESGGAEQVARTLIDRFGERNAHWAMVCIAFLVGLPLFFEVGFVLLVPIAFTVARRVGVSILMVGLPMVAGLSVVHALV PPHPAAMLAVQAYQASVGQTLFYAILIGIPTAIIAGPVYAKFIVPRIHLPAENPLAKQFLDREPRQKLPSFGLTMATILL PVVLMLLGGWANLISTPGSAFNSFLLFIGNSVIALLLATLLSFWTLGIAQGFNRDSILKFTNECLAPTASITLLVGAGGG LNRILIDSGVTNEIVGLAQDFHLSPLLMGWLFAALMRVATGSATVAMTTASGIVAPVAMGLGYPHPELLVLATGAGSVIF SHVNDGGFWLIKEYFNMTVAQTFKTWTVLETLISVVAFALTLGLAQVL
Specific function: Part Of The Gluconate Utilization System Gnt-I; High- Affinity Intake Of Gluconate. [C]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gntP permease family [H]
Homologues:
Organism=Escherichia coli, GI48994935, Length=429, Percent_Identity=45.2214452214452, Blast_Score=353, Evalue=1e-98, Organism=Escherichia coli, GI1790716, Length=440, Percent_Identity=40, Blast_Score=327, Evalue=1e-90, Organism=Escherichia coli, GI2367370, Length=418, Percent_Identity=40.1913875598086, Blast_Score=300, Evalue=1e-82, Organism=Escherichia coli, GI1788707, Length=430, Percent_Identity=37.2093023255814, Blast_Score=273, Evalue=1e-74, Organism=Escherichia coli, GI1790776, Length=435, Percent_Identity=33.7931034482759, Blast_Score=253, Evalue=1e-68, Organism=Escherichia coli, GI48994939, Length=433, Percent_Identity=35.5658198614319, Blast_Score=242, Evalue=3e-65, Organism=Escherichia coli, GI1789097, Length=446, Percent_Identity=33.4080717488789, Blast_Score=219, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 47139; Mature: 47008
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSPGISLLVYAAVAIIALIVLIARYRLNPFIVITLVSVGLALVAGMPASGVVASYEAG CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCC VGKTLGHIALVVALGTMLGKMMAESGGAEQVARTLIDRFGERNAHWAMVCIAFLVGLPLF CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FEVGFVLLVPIAFTVARRVGVSILMVGLPMVAGLSVVHALVPPHPAAMLAVQAYQASVGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH TLFYAILIGIPTAIIAGPVYAKFIVPRIHLPAENPLAKQFLDREPRQKLPSFGLTMATIL HHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHCCCHHHHCCCCCHHHHHHH LPVVLMLLGGWANLISTPGSAFNSFLLFIGNSVIALLLATLLSFWTLGIAQGFNRDSILK HHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH FTNECLAPTASITLLVGAGGGLNRILIDSGVTNEIVGLAQDFHLSPLLMGWLFAALMRVA HHHHHCCCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH TGSATVAMTTASGIVAPVAMGLGYPHPELLVLATGAGSVIFSHVNDGGFWLIKEYFNMTV CCCCEEEEEEHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCEEHHHHHHHHHH AQTFKTWTVLETLISVVAFALTLGLAQVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SPSPGISLLVYAAVAIIALIVLIARYRLNPFIVITLVSVGLALVAGMPASGVVASYEAG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCC VGKTLGHIALVVALGTMLGKMMAESGGAEQVARTLIDRFGERNAHWAMVCIAFLVGLPLF CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FEVGFVLLVPIAFTVARRVGVSILMVGLPMVAGLSVVHALVPPHPAAMLAVQAYQASVGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH TLFYAILIGIPTAIIAGPVYAKFIVPRIHLPAENPLAKQFLDREPRQKLPSFGLTMATIL HHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHCCCHHHHCCCCCHHHHHHH LPVVLMLLGGWANLISTPGSAFNSFLLFIGNSVIALLLATLLSFWTLGIAQGFNRDSILK HHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH FTNECLAPTASITLLVGAGGGLNRILIDSGVTNEIVGLAQDFHLSPLLMGWLFAALMRVA HHHHHCCCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH TGSATVAMTTASGIVAPVAMGLGYPHPELLVLATGAGSVIFSHVNDGGFWLIKEYFNMTV CCCCEEEEEEHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCEEHHHHHHHHHH AQTFKTWTVLETLISVVAFALTLGLAQVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; gluconate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA