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The map label for this gene is dan [H]

Identifier: 66043682

GI number: 66043682

Start: 453090

End: 454565

Strand: Reverse

Name: dan [H]

Synonym: Psyr_0415

Alternate gene names: 66043682

Gene position: 454565-453090 (Counterclockwise)

Preceding gene: 66043683

Following gene: 66043669

Centisome position: 7.46

GC content: 63.08

Gene sequence:

>1476_bases
ATGTTTTATGACCTGATCATCCGCGACGCACTGGTCATTGATGGCAGTGACACACCGGGGGTACGCGCCGATGTGGCGAT
CAGCGACGGGCGCATTCAGCGCATCGGCAGTCTGGCCGGTGACAGAGCCCGGGAAGAAGTCGATGCGGCCGGTCGCGTGC
TGGCCCCAGGGTTTATCGATGTCCACACCCACGACGATACGGTGGTCATCCGCAAACCCGACATGCTGCCGAAAATCAGC
CAGGGCGTAACGACCGTCATCGTCGGCAACTGCGGGATCAGCGCGTCGCCGGTCTCGCTGAGCGGCAATCCGCCCGACCC
GATGAACCTGCTGGGCGACGCCGCTGCGTTCATCTATCCACGTTTCACCGACTACCGCGCAGCGGTTGAAAACGCCAGGC
CAGCGGTGAACGTGGCGGCGCTGATCGGCCATACCGCCTTGCGCAGCAACCACATGGATGACTTGTTGCGCAGCGCCAGC
CCAGAAGAAATCGCTGCCATGCGCGAGCAGTTGCGTGACAGCCTGGAAGCGGGCGCGCTAGGGTTGTCGACCGGCCTTGC
CTACGCCTCTGCGTTCTCGGCCGAAACCAGCGAGGTCAAACAACTGGCGGAAGAGCTCAGCGCGTTCGGCGCGATTTACA
CCACCCACCTGCGCAGCGAATTCGAGCCGGTGCTGGAGGCCATGGCGGAAGCATTCGAGATAGGCCGTCATGCGCGCTCA
CCGGTCATCATCTCGCACATGAAATGCGCCGGTGCCGGCAACTGGGGACGCAGCCCGCAACTGCTGGCAGCCCTGGAAGA
AGCCGCGCAGGACCATCCGGTAGGTTGCGACTGCTACCCTTATGCGGCCAGCTCTTCGACGCTGGACCTCAAACAGGTCA
CAGACGCGTTCCGCATCACCATCACCTGGTCTACGCCGCATCCGGATCAGGGTGGCAGGGATCTGCAGGACATTGCCGCC
GACTGGGGGCTGTCATTACTCGACGCCGCACGCAAGTTGCAGCCTGCGGGTGCGGTGTACTACGGCATGGATGAAAGCGA
TGTCGAGCGCATCATGTCTCACCCGCTGGCGATGATCGGCTCCGATGGCCTTCCGGAAGACCCGTTTCCACACCCGCGCC
TGTGGGGTGCGTTCCCGAGGGTGCTCGGGCATTTCAGTCGCGACAAGGGGCTGTTTGCGTTGCATACCGCCGTACACAAA
ATGACCGGACTGTCGGCCGCGCGCTTCGCCCTGCACGAGCGCGGCCTTATTCGCGAAGGCTACTGGGCGGATCTGGTGCT
GTTCAATCCGCAAACCGTGCGAGACGTGGCGGACTTCAAAGATCCTCAGCGAGCGGCGCAGGGCATCGACGGTGTTTGGG
TCAACGGCCGGTTGAGCTATGCCGAAGGCCAGCCGCAAGGCGAGCGACAGGGCAGATTCCTGCCGCGTAACGGCTCGCTG
CTGCAAGGCTTTAAGGATGAAAAAGCGCCGACGTAG

Upstream 100 bases:

>100_bases
GTCGAGCCCTGAAGACAACCAGGAGCGGCTGCGCCGGATCAAGCTTGCGCTGGATGAATACCGTGGCGGCGAAGATGGCC
TGCCGCTGGGAGACTGAACC

Downstream 100 bases:

>100_bases
TCGTCGGCGCTGAAATCGACCGATGCGTCTTGAGGCATCGACGCATCGTCAGCCCGGCAACTACACGTGATACTGCGCCG
ACAACTCATGCACCGCGTTG

Product: N-acyl-D-amino-acid deacylase

Products: NA

Alternate protein names: N-acyl-D-amino-acid deacylase [H]

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MFYDLIIRDALVIDGSDTPGVRADVAISDGRIQRIGSLAGDRAREEVDAAGRVLAPGFIDVHTHDDTVVIRKPDMLPKIS
QGVTTVIVGNCGISASPVSLSGNPPDPMNLLGDAAAFIYPRFTDYRAAVENARPAVNVAALIGHTALRSNHMDDLLRSAS
PEEIAAMREQLRDSLEAGALGLSTGLAYASAFSAETSEVKQLAEELSAFGAIYTTHLRSEFEPVLEAMAEAFEIGRHARS
PVIISHMKCAGAGNWGRSPQLLAALEEAAQDHPVGCDCYPYAASSSTLDLKQVTDAFRITITWSTPHPDQGGRDLQDIAA
DWGLSLLDAARKLQPAGAVYYGMDESDVERIMSHPLAMIGSDGLPEDPFPHPRLWGAFPRVLGHFSRDKGLFALHTAVHK
MTGLSAARFALHERGLIREGYWADLVLFNPQTVRDVADFKDPQRAAQGIDGVWVNGRLSYAEGQPQGERQGRFLPRNGSL
LQGFKDEKAPT

Sequences:

>Translated_491_residues
MFYDLIIRDALVIDGSDTPGVRADVAISDGRIQRIGSLAGDRAREEVDAAGRVLAPGFIDVHTHDDTVVIRKPDMLPKIS
QGVTTVIVGNCGISASPVSLSGNPPDPMNLLGDAAAFIYPRFTDYRAAVENARPAVNVAALIGHTALRSNHMDDLLRSAS
PEEIAAMREQLRDSLEAGALGLSTGLAYASAFSAETSEVKQLAEELSAFGAIYTTHLRSEFEPVLEAMAEAFEIGRHARS
PVIISHMKCAGAGNWGRSPQLLAALEEAAQDHPVGCDCYPYAASSSTLDLKQVTDAFRITITWSTPHPDQGGRDLQDIAA
DWGLSLLDAARKLQPAGAVYYGMDESDVERIMSHPLAMIGSDGLPEDPFPHPRLWGAFPRVLGHFSRDKGLFALHTAVHK
MTGLSAARFALHERGLIREGYWADLVLFNPQTVRDVADFKDPQRAAQGIDGVWVNGRLSYAEGQPQGERQGRFLPRNGSL
LQGFKDEKAPT
>Mature_491_residues
MFYDLIIRDALVIDGSDTPGVRADVAISDGRIQRIGSLAGDRAREEVDAAGRVLAPGFIDVHTHDDTVVIRKPDMLPKIS
QGVTTVIVGNCGISASPVSLSGNPPDPMNLLGDAAAFIYPRFTDYRAAVENARPAVNVAALIGHTALRSNHMDDLLRSAS
PEEIAAMREQLRDSLEAGALGLSTGLAYASAFSAETSEVKQLAEELSAFGAIYTTHLRSEFEPVLEAMAEAFEIGRHARS
PVIISHMKCAGAGNWGRSPQLLAALEEAAQDHPVGCDCYPYAASSSTLDLKQVTDAFRITITWSTPHPDQGGRDLQDIAA
DWGLSLLDAARKLQPAGAVYYGMDESDVERIMSHPLAMIGSDGLPEDPFPHPRLWGAFPRVLGHFSRDKGLFALHTAVHK
MTGLSAARFALHERGLIREGYWADLVLFNPQTVRDVADFKDPQRAAQGIDGVWVNGRLSYAEGQPQGERQGRFLPRNGSL
LQGFKDEKAPT

Specific function: Has a wide specificity; hydrolyzes N-acyl derivative of neutral D-amino acids [H]

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR023100
- InterPro:   IPR012855
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3; PF07908 D-aminoacyl_C [H]

EC number: =3.5.1.81 [H]

Molecular weight: Translated: 53068; Mature: 53068

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYDLIIRDALVIDGSDTPGVRADVAISDGRIQRIGSLAGDRAREEVDAAGRVLAPGFID
CCHHHEEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEECCCEEE
VHTHDDTVVIRKPDMLPKISQGVTTVIVGNCGISASPVSLSGNPPDPMNLLGDAAAFIYP
EEECCCEEEEECCCCCCHHHCCCEEEEEECCCCCCCCEECCCCCCCHHHHHHHHHHHHCC
RFTDYRAAVENARPAVNVAALIGHTALRSNHMDDLLRSASPEEIAAMREQLRDSLEAGAL
CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCH
GLSTGLAYASAFSAETSEVKQLAEELSAFGAIYTTHLRSEFEPVLEAMAEAFEIGRHARS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PVIISHMKCAGAGNWGRSPQLLAALEEAAQDHPVGCDCYPYAASSSTLDLKQVTDAFRIT
CEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCEEEEE
ITWSTPHPDQGGRDLQDIAADWGLSLLDAARKLQPAGAVYYGMDESDVERIMSHPLAMIG
EEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCHHHHC
SDGLPEDPFPHPRLWGAFPRVLGHFSRDKGLFALHTAVHKMTGLSAARFALHERGLIREG
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
YWADLVLFNPQTVRDVADFKDPQRAAQGIDGVWVNGRLSYAEGQPQGERQGRFLPRNGSL
CEEEEEEECCHHHHHHHHCCCHHHHHCCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCH
LQGFKDEKAPT
HCCCCCCCCCC
>Mature Secondary Structure
MFYDLIIRDALVIDGSDTPGVRADVAISDGRIQRIGSLAGDRAREEVDAAGRVLAPGFID
CCHHHEEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEECCCEEE
VHTHDDTVVIRKPDMLPKISQGVTTVIVGNCGISASPVSLSGNPPDPMNLLGDAAAFIYP
EEECCCEEEEECCCCCCHHHCCCEEEEEECCCCCCCCEECCCCCCCHHHHHHHHHHHHCC
RFTDYRAAVENARPAVNVAALIGHTALRSNHMDDLLRSASPEEIAAMREQLRDSLEAGAL
CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCH
GLSTGLAYASAFSAETSEVKQLAEELSAFGAIYTTHLRSEFEPVLEAMAEAFEIGRHARS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PVIISHMKCAGAGNWGRSPQLLAALEEAAQDHPVGCDCYPYAASSSTLDLKQVTDAFRIT
CEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCEEEEE
ITWSTPHPDQGGRDLQDIAADWGLSLLDAARKLQPAGAVYYGMDESDVERIMSHPLAMIG
EEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCHHHHC
SDGLPEDPFPHPRLWGAFPRVLGHFSRDKGLFALHTAVHKMTGLSAARFALHERGLIREG
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
YWADLVLFNPQTVRDVADFKDPQRAAQGIDGVWVNGRLSYAEGQPQGERQGRFLPRNGSL
CEEEEEEECCHHHHHHHHCCCHHHHHCCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCH
LQGFKDEKAPT
HCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8541651 [H]