| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043537
Identifier: 66043537
GI number: 66043537
Start: 284990
End: 285865
Strand: Reverse
Name: 66043537
Synonym: Psyr_0267
Alternate gene names: NA
Gene position: 285865-284990 (Counterclockwise)
Preceding gene: 66043538
Following gene: 66043536
Centisome position: 4.69
GC content: 61.19
Gene sequence:
>876_bases ATGCGCCGCTGGGGCAAAGGCAGTACCCGTATCGTTGGCCTGCATGATCCGCAGGTCAACGAACATCATCTGCTGCAAAA CGGCCTGCCGCAAGACGGCAGGCTGCGTTTGCTCAGTTTCAATATCCAGGTGGGTATCAGTACCCAGCGCTACCATCATT ACCTGACGCGCAGCTGGCAGCACTTGCTGCCGCATGGCGGCAGGGCTGGCAACCTGCAGAAGATCGGCGACCTGATCAAC GATTTCGATCTGGTGGCACTTCAGGAAGTCGACGGTGGCAGCATGCGCTCCGGCTTCGTCAATCAGGTCGAGCATCTCGC CCAGTTGGGTGGCTTTCCGTACTGGTATCAACAACTCAATCGCAATCTCGGGCGCCTGGCGCAGCACAGCAACGGTGTAT TGAGCCGTCTGCGCCCGACCAAGATCGAGGATCACCCGCTGCCAGGCCCGGCCGGGCGCGGGGCGATTCTCGTGCGTTTC GGTGAAGGCGAGGATGCCCTGGTCGTGGTCATGATGCACCTGGCGCTGGGGACCCGAACCCGAACCCGGCAGCTGGCGTA CATTCGCGAACTGATCGGCGGTTATCGCCATCAGGTGCTGATGGGCGACATGAACACCCACGCCAATGACCTGCTGGAAC ACTCGCCGCTAAGGGATCTGGGCCTTTTGGCGCCGCAGATAGAAGCGACCTTTCCGAGCTGGCGGCCACAACGCTGCCTC GATCACATTTTGCTCAGCCCGACCCTGACGCTCGAGCGCGTGCAGGTACTGGCGCAACCCATTTCCGATCACCTGCCTGT CGCTGTCGAGATTCGCCTGCCAGACTCATTGCGTGGGGACTCACTGCCTGTGCCCTCTGGTGGAAGCCTTGCATGA
Upstream 100 bases:
>100_bases CCTGGGTTCTGCCGGTGGTCCGGAAAAGACCCTGGAAGTTGCCGACCAGTTGATTGCCAAAGAGCGAGCGGCTGCCGCAG CCGCCAAGTAAGCGCACATC
Downstream 100 bases:
>100_bases GCGACGACGCGGAGCGTTGGAAAGAGAAATACCTCAAAGGGATCGAGCAACAGGACACGCTCGAAAAGCGCTGGGATGCG CGGCTCGATTTGTTGCGACG
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Metal-Dependent Hydrolase
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MRRWGKGSTRIVGLHDPQVNEHHLLQNGLPQDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGDLIN DFDLVALQEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPLPGPAGRGAILVRF GEGEDALVVVMMHLALGTRTRTRQLAYIRELIGGYRHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEATFPSWRPQRCL DHILLSPTLTLERVQVLAQPISDHLPVAVEIRLPDSLRGDSLPVPSGGSLA
Sequences:
>Translated_291_residues MRRWGKGSTRIVGLHDPQVNEHHLLQNGLPQDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGDLIN DFDLVALQEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPLPGPAGRGAILVRF GEGEDALVVVMMHLALGTRTRTRQLAYIRELIGGYRHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEATFPSWRPQRCL DHILLSPTLTLERVQVLAQPISDHLPVAVEIRLPDSLRGDSLPVPSGGSLA >Mature_291_residues MRRWGKGSTRIVGLHDPQVNEHHLLQNGLPQDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGDLIN DFDLVALQEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPLPGPAGRGAILVRF GEGEDALVVVMMHLALGTRTRTRQLAYIRELIGGYRHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEATFPSWRPQRCL DHILLSPTLTLERVQVLAQPISDHLPVAVEIRLPDSLRGDSLPVPSGGSLA
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32484; Mature: 32484
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRWGKGSTRIVGLHDPQVNEHHLLQNGLPQDGRLRLLSFNIQVGISTQRYHHYLTRSWQ CCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHH HLLPHGGRAGNLQKIGDLINDFDLVALQEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLN HHCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH RNLGRLAQHSNGVLSRLRPTKIEDHPLPGPAGRGAILVRFGEGEDALVVVMMHLALGTRT HHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCH RTRQLAYIRELIGGYRHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEATFPSWRPQRCL HHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCHHHHHCCCHHHCCCCCCCHHHHH DHILLSPTLTLERVQVLAQPISDHLPVAVEIRLPDSLRGDSLPVPSGGSLA HHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRWGKGSTRIVGLHDPQVNEHHLLQNGLPQDGRLRLLSFNIQVGISTQRYHHYLTRSWQ CCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHH HLLPHGGRAGNLQKIGDLINDFDLVALQEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLN HHCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH RNLGRLAQHSNGVLSRLRPTKIEDHPLPGPAGRGAILVRFGEGEDALVVVMMHLALGTRT HHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCH RTRQLAYIRELIGGYRHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEATFPSWRPQRCL HHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCHHHHHCCCHHHCCCCCCCHHHHH DHILLSPTLTLERVQVLAQPISDHLPVAVEIRLPDSLRGDSLPVPSGGSLA HHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA