| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is fbpB2 [H]
Identifier: 66043515
GI number: 66043515
Start: 257895
End: 259511
Strand: Direct
Name: fbpB2 [H]
Synonym: Psyr_0245
Alternate gene names: 66043515
Gene position: 257895-259511 (Clockwise)
Preceding gene: 66043514
Following gene: 66043516
Centisome position: 4.23
GC content: 64.19
Gene sequence:
>1617_bases GTGGCCCATCCTGCCCAACGCCGCTGGTACCCCCTGGTTTTCGCCATCGCTGCACTGGTCGTGCTGCCGCTGAGCGTTCT GCTGCTGTCGTGGGAGACGGTCGACCAGCAGATATGGTCGCACCTGCTCGAAACCCAGATGGCGCGTCTGCTGAGCAATA CGCTGATCCTGGTGCTGGGTGTCGGCGTGGGCGTGACCCTGCTGGGGGTGAGCCTTGCGTGGCTGACCAGCCTGTGTGAA TTCCCTGGCCGCCGCTGGCTGGACTGGGCGCTGATGCTGCCGTTCGCGATCCCCGCCTATGTGCTGGCGTTCGTGTTCGT CGGGCTGCTGGATTTTTCCGGCCCGGTGCAGACCCTGATGCGCGAATGGTTCGGCTCCGGTCTGCGCCTGCCCCGGGTGC GTTCTACCGGTGGGGTGATCATCGTCCTGGTGCTGGTTTTCTATCCCTACGTCTACCTGTTGGCGCGCACGGCGTTTCTG GCGCAGGGCAAGGGTCTGATGGAAGCTGCGCGAGTGCTGGGCAATACGCCCCTGCAGGCTTTCTGGCGCGTGGCGCTGCC AATGGCGCGTCCGGCCATCGGCGCGGGGGTGGCGCTGGCGCTGATGGAAACCCTGGCCGATTTTGGTGCGGTGTCGGTGT TCAACTTCGACACGTTCACCACTGCCATCTACAAGACCTGGTACGGCTTCTTCAGCCTGTCCAGCGCCGCGCAACTGGCC AGCCTGTTGCTGTTGGCCGTGCTGGTGCTGCTGTACGGCGAACGCCGCGCCCGGAGGGCAAGCCGACCGGCCAACGAGCG TCCGCGTGGCGCTGCGCTTTACCGGTTAAGCGGCATCAAGGCATGGGCCGCGAGCTTCTGGTGTGGGCTGGTGTTTCTCT GTGCCTTCGTGGTGCCGATGCTGCAATTGATCGTCTGGGTCTGGCAGCGTGGTCGCTTCGATCTGGATGAGCGCTACACC GGTCTGATTCTGCACACGCTCTATCTGGGTGGCATGGCGGCGTTGATCACTGTCAGCGTGGCGCTGATTCTGGCGTTTGC CCGACGTATGGCGCCCACGCCTGCGATCCGCTCCGGCGTCAGCCTCGCCAACCTCGGCTACGCATTGCCAGGCTCGGTAC TGGCCGTTTCAATCATGCTGGCGTTCAGTTACCTGGACCGCGAACTGGTCATTCCGCTGTCCGGCTGGCTGGGCGGCGCA GGCAAGCCTTTGCTGCTGGGCAGCCTCTCGGCCTTGCTGCTGGCGTATCTGGTGCGTTTCATCGCCGTCGCCTTCGGTCC GCTGGAGCACAGCCTGTCGCGCATCCGCCCGTCATTGCCTGAAGCGGCGCGCAGTCTGGGGGTCAGCGGGCCAAAGTTGT TTCTCAACGTGTATCTGCCGTTGCTGGTGCCAGGGGCGCTGAGCGCGGCGCTGCTGGTGTTCGTCGATGTGCTCAAGGAA ATGCCGGCAACCCTGCTTATGCGCCCGTTTGGCTGGGATACGCTGGCGGTTCGCATCTTCGAAATGACCAGCGAGGGCGA GTGGGCGCGGGCTGCGTTGCCAGCTTTGTCGCTGGTGCTTGTAGGATTATTACCCGTCATTGGGCTGATTCGTCGCTCTG CCCGGCAGATTGGCTAG
Upstream 100 bases:
>100_bases CGCGGACAAGTCCGCTCCTACGGCTTTCAGCCAGAATCAGAAGCAGACCTGTGCGCACGCTCTGCTTACCCTCTTGAACC CCCTCATTTCGAGAACCTCC
Downstream 100 bases:
>100_bases GTGCGGGGGCCTCACCTTGCGGCTACAATGCGCCGCAATTGGTGCGGTCTGTCAGATAATTCGGTCAGCTGTTACGTGCT GCAAACTCCGGTTCATGGGG
Product: binding-protein dependent transport system inner membrane protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MAHPAQRRWYPLVFAIAALVVLPLSVLLLSWETVDQQIWSHLLETQMARLLSNTLILVLGVGVGVTLLGVSLAWLTSLCE FPGRRWLDWALMLPFAIPAYVLAFVFVGLLDFSGPVQTLMREWFGSGLRLPRVRSTGGVIIVLVLVFYPYVYLLARTAFL AQGKGLMEAARVLGNTPLQAFWRVALPMARPAIGAGVALALMETLADFGAVSVFNFDTFTTAIYKTWYGFFSLSSAAQLA SLLLLAVLVLLYGERRARRASRPANERPRGAALYRLSGIKAWAASFWCGLVFLCAFVVPMLQLIVWVWQRGRFDLDERYT GLILHTLYLGGMAALITVSVALILAFARRMAPTPAIRSGVSLANLGYALPGSVLAVSIMLAFSYLDRELVIPLSGWLGGA GKPLLLGSLSALLLAYLVRFIAVAFGPLEHSLSRIRPSLPEAARSLGVSGPKLFLNVYLPLLVPGALSAALLVFVDVLKE MPATLLMRPFGWDTLAVRIFEMTSEGEWARAALPALSLVLVGLLPVIGLIRRSARQIG
Sequences:
>Translated_538_residues MAHPAQRRWYPLVFAIAALVVLPLSVLLLSWETVDQQIWSHLLETQMARLLSNTLILVLGVGVGVTLLGVSLAWLTSLCE FPGRRWLDWALMLPFAIPAYVLAFVFVGLLDFSGPVQTLMREWFGSGLRLPRVRSTGGVIIVLVLVFYPYVYLLARTAFL AQGKGLMEAARVLGNTPLQAFWRVALPMARPAIGAGVALALMETLADFGAVSVFNFDTFTTAIYKTWYGFFSLSSAAQLA SLLLLAVLVLLYGERRARRASRPANERPRGAALYRLSGIKAWAASFWCGLVFLCAFVVPMLQLIVWVWQRGRFDLDERYT GLILHTLYLGGMAALITVSVALILAFARRMAPTPAIRSGVSLANLGYALPGSVLAVSIMLAFSYLDRELVIPLSGWLGGA GKPLLLGSLSALLLAYLVRFIAVAFGPLEHSLSRIRPSLPEAARSLGVSGPKLFLNVYLPLLVPGALSAALLVFVDVLKE MPATLLMRPFGWDTLAVRIFEMTSEGEWARAALPALSLVLVGLLPVIGLIRRSARQIG >Mature_537_residues AHPAQRRWYPLVFAIAALVVLPLSVLLLSWETVDQQIWSHLLETQMARLLSNTLILVLGVGVGVTLLGVSLAWLTSLCEF PGRRWLDWALMLPFAIPAYVLAFVFVGLLDFSGPVQTLMREWFGSGLRLPRVRSTGGVIIVLVLVFYPYVYLLARTAFLA QGKGLMEAARVLGNTPLQAFWRVALPMARPAIGAGVALALMETLADFGAVSVFNFDTFTTAIYKTWYGFFSLSSAAQLAS LLLLAVLVLLYGERRARRASRPANERPRGAALYRLSGIKAWAASFWCGLVFLCAFVVPMLQLIVWVWQRGRFDLDERYTG LILHTLYLGGMAALITVSVALILAFARRMAPTPAIRSGVSLANLGYALPGSVLAVSIMLAFSYLDRELVIPLSGWLGGAG KPLLLGSLSALLLAYLVRFIAVAFGPLEHSLSRIRPSLPEAARSLGVSGPKLFLNVYLPLLVPGALSAALLVFVDVLKEM PATLLMRPFGWDTLAVRIFEMTSEGEWARAALPALSLVLVGLLPVIGLIRRSARQIG
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=175, Percent_Identity=29.1428571428571, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI87082099, Length=147, Percent_Identity=34.6938775510204, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 58678; Mature: 58547
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHPAQRRWYPLVFAIAALVVLPLSVLLLSWETVDQQIWSHLLETQMARLLSNTLILVLG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGVGVTLLGVSLAWLTSLCEFPGRRWLDWALMLPFAIPAYVLAFVFVGLLDFSGPVQTLM HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH REWFGSGLRLPRVRSTGGVIIVLVLVFYPYVYLLARTAFLAQGKGLMEAARVLGNTPLQA HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH FWRVALPMARPAIGAGVALALMETLADFGAVSVFNFDTFTTAIYKTWYGFFSLSSAAQLA HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH SLLLLAVLVLLYGERRARRASRPANERPRGAALYRLSGIKAWAASFWCGLVFLCAFVVPM HHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQLIVWVWQRGRFDLDERYTGLILHTLYLGGMAALITVSVALILAFARRMAPTPAIRSGV HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC SLANLGYALPGSVLAVSIMLAFSYLDRELVIPLSGWLGGAGKPLLLGSLSALLLAYLVRF CHHHCCCCCCHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH IAVAFGPLEHSLSRIRPSLPEAARSLGVSGPKLFLNVYLPLLVPGALSAALLVFVDVLKE HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MPATLLMRPFGWDTLAVRIFEMTSEGEWARAALPALSLVLVGLLPVIGLIRRSARQIG CCHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AHPAQRRWYPLVFAIAALVVLPLSVLLLSWETVDQQIWSHLLETQMARLLSNTLILVLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGVGVTLLGVSLAWLTSLCEFPGRRWLDWALMLPFAIPAYVLAFVFVGLLDFSGPVQTLM HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH REWFGSGLRLPRVRSTGGVIIVLVLVFYPYVYLLARTAFLAQGKGLMEAARVLGNTPLQA HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH FWRVALPMARPAIGAGVALALMETLADFGAVSVFNFDTFTTAIYKTWYGFFSLSSAAQLA HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH SLLLLAVLVLLYGERRARRASRPANERPRGAALYRLSGIKAWAASFWCGLVFLCAFVVPM HHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQLIVWVWQRGRFDLDERYTGLILHTLYLGGMAALITVSVALILAFARRMAPTPAIRSGV HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC SLANLGYALPGSVLAVSIMLAFSYLDRELVIPLSGWLGGAGKPLLLGSLSALLLAYLVRF CHHHCCCCCCHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH IAVAFGPLEHSLSRIRPSLPEAARSLGVSGPKLFLNVYLPLLVPGALSAALLVFVDVLKE HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MPATLLMRPFGWDTLAVRIFEMTSEGEWARAALPALSLVLVGLLPVIGLIRRSARQIG CCHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]