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The map label for this gene is ymdC [H]

Identifier: 66043499

GI number: 66043499

Start: 243182

End: 244762

Strand: Reverse

Name: ymdC [H]

Synonym: Psyr_0229

Alternate gene names: 66043499

Gene position: 244762-243182 (Counterclockwise)

Preceding gene: 66043500

Following gene: 66043496

Centisome position: 4.02

GC content: 61.99

Gene sequence:

>1581_bases
TTGAATAACTCATGGGCCTTGCCCTTTTGCTTGCTGGTTGCGTTGTGCGTCAGCGGTTGCGCGCATCAACAGGTCACCAG
TGAGCCAAGCCAGGCCATGCCGTCTTCAGGTTCCGCGTTCGGCCGTTCGATCCAGGCAATGGCCGTGCCGCATGAGGGAC
GTTCTGGCTTCCGCCTGCTGCCTGACAGCAGTGACGCGTTCAAGGCTCGCGCCGAACTGATCCGCAACGCCAAAAGCAGC
CTTGATCTGCAGTATTACATCGTCCACGACGGCCTGAGTACGCGCGCCCTGATCGACGAACTGCTCAAGGCGGCTGACCG
TGGCGTTCGTGTGCGCATCCTGCTGGACGACACCACCAGCGACGGTCTGGATCAGGCCATCGCCACCCTCGCCGCTCACC
CGAACATCCAGATTCGCCTGTTCAATCCGCAAAACCTGGGGCGCGAGACCGGCATCACCCGCAGCCTCGGGCGCCTGATG
AACCTGTCGCGCCAGCACCGGCGCATGCACAACAAGCTGTGGCTGGCCGACAGCAGTGTGGCCATCGTCGGCGGGCGCAA
CCTGGGCGATGAATACTTCGATGCCGAGCCGAACCTGAACTTCACCGATATCGACATGCTCAGCGTGGGGCCGGTGGCCG
AGCAGCTCGGCCACAGCTTCGACCAGTACTGGAACAGCACGCTCAGCAAGCCTATCGGTGAATTCATCTATTTCCTGCCC
GACGGCGAGGATCTGGCCGAGGCCCGGCGCAAGCTGGACGATTCTCTGGAGCAGGCGCACCAGCAGCACAAGGCGCTGTA
TGAGCGACTGATGGCCTACAAGACCCAGCCGCGCATGAAAACCTGGCTCAACGAGCTGGTCTGGGCATACAACCAGGCGC
TGTGGGACGCACCGACCAAGGTACTGGCGCAGGGCGAGCCTGACCCGCATCTGCTGCTGACCACGCAACTGGCGCCTGAA
CTGCTGAACACTCACAAGGAACTGATGCTGATCTCGGCCTACTTTGTACCGGGCCCGGAAGGCTTGCTGTACCTCACCGG
CCGGGCCGATGCCGGCGTCAATGTCAGCCTGCTGACCAATTCCCTGGAAGCCACCGACGTGCCCGCCGTGCATGGCGGCT
ATGCGCCGTACCGCAAGGCACTGCTGGAGCATGGCGTGAAGCTGTTCGAGCTGCGCCGGCAGCCTGGCGATACCGAGACG
ATGCGCGGCAGCGGTCCGCATCTGTTCAAGAAAAGCCATTCCCTGGTCAGTTCCGAATCGAGCCTGCACAGCAAGGCGAT
GATCTTCGATCGGCAGAAAGTCTTTGTCGGCTCATTCAACTTCGACCCGCGCTCTGTGCTGTGGAATACCGAAGTCGGCG
TGCTGGTCGACAGCCCGCAACTGGCTGAAGAATTGCGCGAACTGACCTTGCAGGGCATGGCCCCGTCGCTCACCTATGAA
GCGCGGCTGGAGGACGGCAAAGTGGTGTGGGTGACCGAAGACAACGGCCAGATCCACACTCTGCATACCGAACCGGGCGA
CTGGTGGCGGCGTTTCAACGCGTGGATGAGCCGCGCCATCGGCCTGGAAAGAATGCTTTAA

Upstream 100 bases:

>100_bases
TGCGCTACTGAATGCGCAAACTGACTGATGCGGGCAAATCTTTCCCGGTTTTGCGGGTCATATCGCCAAGTCGAGCCATG
TCCAGACGCGGAAGATCAAT

Downstream 100 bases:

>100_bases
GCGGGCACAGCCTGGGCATCGCCGAACGCGCCACGTCGCCGGATCAGTATCAGCAGGCCCAAGGCACCGGCAGCCATCAT
CAACGGCAACGCCTCGCCAC

Product: phospholipase D/transphosphatidylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MNNSWALPFCLLVALCVSGCAHQQVTSEPSQAMPSSGSAFGRSIQAMAVPHEGRSGFRLLPDSSDAFKARAELIRNAKSS
LDLQYYIVHDGLSTRALIDELLKAADRGVRVRILLDDTTSDGLDQAIATLAAHPNIQIRLFNPQNLGRETGITRSLGRLM
NLSRQHRRMHNKLWLADSSVAIVGGRNLGDEYFDAEPNLNFTDIDMLSVGPVAEQLGHSFDQYWNSTLSKPIGEFIYFLP
DGEDLAEARRKLDDSLEQAHQQHKALYERLMAYKTQPRMKTWLNELVWAYNQALWDAPTKVLAQGEPDPHLLLTTQLAPE
LLNTHKELMLISAYFVPGPEGLLYLTGRADAGVNVSLLTNSLEATDVPAVHGGYAPYRKALLEHGVKLFELRRQPGDTET
MRGSGPHLFKKSHSLVSSESSLHSKAMIFDRQKVFVGSFNFDPRSVLWNTEVGVLVDSPQLAEELRELTLQGMAPSLTYE
ARLEDGKVVWVTEDNGQIHTLHTEPGDWWRRFNAWMSRAIGLERML

Sequences:

>Translated_526_residues
MNNSWALPFCLLVALCVSGCAHQQVTSEPSQAMPSSGSAFGRSIQAMAVPHEGRSGFRLLPDSSDAFKARAELIRNAKSS
LDLQYYIVHDGLSTRALIDELLKAADRGVRVRILLDDTTSDGLDQAIATLAAHPNIQIRLFNPQNLGRETGITRSLGRLM
NLSRQHRRMHNKLWLADSSVAIVGGRNLGDEYFDAEPNLNFTDIDMLSVGPVAEQLGHSFDQYWNSTLSKPIGEFIYFLP
DGEDLAEARRKLDDSLEQAHQQHKALYERLMAYKTQPRMKTWLNELVWAYNQALWDAPTKVLAQGEPDPHLLLTTQLAPE
LLNTHKELMLISAYFVPGPEGLLYLTGRADAGVNVSLLTNSLEATDVPAVHGGYAPYRKALLEHGVKLFELRRQPGDTET
MRGSGPHLFKKSHSLVSSESSLHSKAMIFDRQKVFVGSFNFDPRSVLWNTEVGVLVDSPQLAEELRELTLQGMAPSLTYE
ARLEDGKVVWVTEDNGQIHTLHTEPGDWWRRFNAWMSRAIGLERML
>Mature_526_residues
MNNSWALPFCLLVALCVSGCAHQQVTSEPSQAMPSSGSAFGRSIQAMAVPHEGRSGFRLLPDSSDAFKARAELIRNAKSS
LDLQYYIVHDGLSTRALIDELLKAADRGVRVRILLDDTTSDGLDQAIATLAAHPNIQIRLFNPQNLGRETGITRSLGRLM
NLSRQHRRMHNKLWLADSSVAIVGGRNLGDEYFDAEPNLNFTDIDMLSVGPVAEQLGHSFDQYWNSTLSKPIGEFIYFLP
DGEDLAEARRKLDDSLEQAHQQHKALYERLMAYKTQPRMKTWLNELVWAYNQALWDAPTKVLAQGEPDPHLLLTTQLAPE
LLNTHKELMLISAYFVPGPEGLLYLTGRADAGVNVSLLTNSLEATDVPAVHGGYAPYRKALLEHGVKLFELRRQPGDTET
MRGSGPHLFKKSHSLVSSESSLHSKAMIFDRQKVFVGSFNFDPRSVLWNTEVGVLVDSPQLAEELRELTLQGMAPSLTYE
ARLEDGKVVWVTEDNGQIHTLHTEPGDWWRRFNAWMSRAIGLERML

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=499, Percent_Identity=36.4729458917836, Blast_Score=269, Evalue=4e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58834; Mature: 58834

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSWALPFCLLVALCVSGCAHQQVTSEPSQAMPSSGSAFGRSIQAMAVPHEGRSGFRLL
CCCCCCCHHHHHHHHHHCCCHHHHHCCCCHHCCCCCCCHHCCCEEEEECCCCCCCCCEEC
PDSSDAFKARAELIRNAKSSLDLQYYIVHDGLSTRALIDELLKAADRGVRVRILLDDTTS
CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEECCCC
DGLDQAIATLAAHPNIQIRLFNPQNLGRETGITRSLGRLMNLSRQHRRMHNKLWLADSSV
CHHHHHHHHHHCCCCEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCE
AIVGGRNLGDEYFDAEPNLNFTDIDMLSVGPVAEQLGHSFDQYWNSTLSKPIGEFIYFLP
EEEECCCCCHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCHHHEEEECC
DGEDLAEARRKLDDSLEQAHQQHKALYERLMAYKTQPRMKTWLNELVWAYNQALWDAPTK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHH
VLAQGEPDPHLLLTTQLAPELLNTHKELMLISAYFVPGPEGLLYLTGRADAGVNVSLLTN
HHHCCCCCCCEEEEHHHHHHHHHHHHHEEEEEEEECCCCCCEEEEEECCCCCCEEEEEEC
SLEATDVPAVHGGYAPYRKALLEHGVKLFELRRQPGDTETMRGSGPHLFKKSHSLVSSES
CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCHH
SLHSKAMIFDRQKVFVGSFNFDPRSVLWNTEVGVLVDSPQLAEELRELTLQGMAPSLTYE
HHHHHHHEEECCEEEEEECCCCCCCEEEECCCEEEECCHHHHHHHHHHHHHCCCCCCEEE
ARLEDGKVVWVTEDNGQIHTLHTEPGDWWRRFNAWMSRAIGLERML
EEECCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNSWALPFCLLVALCVSGCAHQQVTSEPSQAMPSSGSAFGRSIQAMAVPHEGRSGFRLL
CCCCCCCHHHHHHHHHHCCCHHHHHCCCCHHCCCCCCCHHCCCEEEEECCCCCCCCCEEC
PDSSDAFKARAELIRNAKSSLDLQYYIVHDGLSTRALIDELLKAADRGVRVRILLDDTTS
CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEECCCC
DGLDQAIATLAAHPNIQIRLFNPQNLGRETGITRSLGRLMNLSRQHRRMHNKLWLADSSV
CHHHHHHHHHHCCCCEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCE
AIVGGRNLGDEYFDAEPNLNFTDIDMLSVGPVAEQLGHSFDQYWNSTLSKPIGEFIYFLP
EEEECCCCCHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCHHHEEEECC
DGEDLAEARRKLDDSLEQAHQQHKALYERLMAYKTQPRMKTWLNELVWAYNQALWDAPTK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHH
VLAQGEPDPHLLLTTQLAPELLNTHKELMLISAYFVPGPEGLLYLTGRADAGVNVSLLTN
HHHCCCCCCCEEEEHHHHHHHHHHHHHEEEEEEEECCCCCCEEEEEECCCCCCEEEEEEC
SLEATDVPAVHGGYAPYRKALLEHGVKLFELRRQPGDTETMRGSGPHLFKKSHSLVSSES
CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCHH
SLHSKAMIFDRQKVFVGSFNFDPRSVLWNTEVGVLVDSPQLAEELRELTLQGMAPSLTYE
HHHHHHHEEECCEEEEEECCCCCCCEEEECCCEEEECCHHHHHHHHHHHHHCCCCCCEEE
ARLEDGKVVWVTEDNGQIHTLHTEPGDWWRRFNAWMSRAIGLERML
EEECCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]