| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043496
Identifier: 66043496
GI number: 66043496
Start: 239693
End: 240061
Strand: Reverse
Name: 66043496
Synonym: Psyr_0226
Alternate gene names: NA
Gene position: 240061-239693 (Counterclockwise)
Preceding gene: 66043499
Following gene: 66043493
Centisome position: 3.94
GC content: 57.72
Gene sequence:
>369_bases ATGAGCATCGAAAGCATCGTCGACTTCAGTGAAGCCAGCACCGCCGCCGAGCACTATCGCCCTGCACCGGAAAAAGTCTT CAAGGGCGACCCGGCACAAACCCTCTACAACCACTACAACAGCCCCTGCGGACAGATGAGCGCGGGCGTCTGGAATGGCG AGCCCGGGCAGTGGCAGGTAAATTATTCGGAGCATGAGTATTGCGAGATTGTGCAGGGTGTTTCAGTCCTGCGCGACGAG CAGGGCCACGCGAAAACCCTGCGCGCAGGTGACCGCTTCGTGATCCCGGCAGGCTTCAAGGGTACTTGGGAGGTGCTGGA AACATGCCGCAAGATTTATGTGGTGTTTGAGGCGGCTGCAGATAAATAA
Upstream 100 bases:
>100_bases TTTTATGTTGATTTTATTAAACAGCTGCGCACGCGCGCCGAGGCACTAACGCGCTGCACGCACGTCAAACCTTCAACGCA TTCAGGACAAGGGGCCCATC
Downstream 100 bases:
>100_bases ATACCGCCCTGGCAGCGACGCCAGGAGCGCAGGCACAAAAAAACCCGCCAGAGCGGGTTTTTTTGCAGCCGACAAAATCA ATTACTTGATTTTGCCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSIESIVDFSEASTAAEHYRPAPEKVFKGDPAQTLYNHYNSPCGQMSAGVWNGEPGQWQVNYSEHEYCEIVQGVSVLRDE QGHAKTLRAGDRFVIPAGFKGTWEVLETCRKIYVVFEAAADK
Sequences:
>Translated_122_residues MSIESIVDFSEASTAAEHYRPAPEKVFKGDPAQTLYNHYNSPCGQMSAGVWNGEPGQWQVNYSEHEYCEIVQGVSVLRDE QGHAKTLRAGDRFVIPAGFKGTWEVLETCRKIYVVFEAAADK >Mature_121_residues SIESIVDFSEASTAAEHYRPAPEKVFKGDPAQTLYNHYNSPCGQMSAGVWNGEPGQWQVNYSEHEYCEIVQGVSVLRDEQ GHAKTLRAGDRFVIPAGFKGTWEVLETCRKIYVVFEAAADK
Specific function: Unknown
COG id: COG3450
COG function: function code R; Predicted enzyme of the cupin superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13629; Mature: 13498
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIESIVDFSEASTAAEHYRPAPEKVFKGDPAQTLYNHYNSPCGQMSAGVWNGEPGQWQV CCHHHHHCHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEE NYSEHEYCEIVQGVSVLRDEQGHAKTLRAGDRFVIPAGFKGTWEVLETCRKIYVVFEAAA CCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCC DK CC >Mature Secondary Structure SIESIVDFSEASTAAEHYRPAPEKVFKGDPAQTLYNHYNSPCGQMSAGVWNGEPGQWQV CHHHHHCHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEE NYSEHEYCEIVQGVSVLRDEQGHAKTLRAGDRFVIPAGFKGTWEVLETCRKIYVVFEAAA CCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCC DK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA