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The map label for this gene is yicC [C]

Identifier: 66043482

GI number: 66043482

Start: 226239

End: 227102

Strand: Reverse

Name: yicC [C]

Synonym: Psyr_0212

Alternate gene names: 66043482

Gene position: 227102-226239 (Counterclockwise)

Preceding gene: 66043485

Following gene: 66043481

Centisome position: 3.73

GC content: 61.92

Gene sequence:

>864_bases
ATGGTGCACAGCATGACTGCCTTTGCCCGAGTAGAGCGGGCCGGTGCCCAGGGCACACTGAGCTGGGAACTGCGCTCGGT
CAACCACCGCTATCTTGAGCCACACCTGCGCCTGCCGGAGTCGTTCCGCGATCTGGAAGGCGCGATTCGCGAAGCACTGC
GTCAGGGCCTGTCGCGCGGCAAGGTCGAATGCACACTGCGCTTTGTCGAGGAAACCGCCGGCAAGCCGCTGCAGGTGGAC
CTTGAACGCGCAGGCCAATTGGTCGCCGCAGCCGAGTCGGTTGCCGGCTTGATCAAACAGCCTGCTGCATTGAATCCGCT
CGAGGTGCTCGCCTGGCCGGGCGTGCTGGTCGCCGATGCCAACGATCCGCAGGTGTTGAACACCGAGGCCCTGAAACTGT
TCAATGATGCGCTGACCGAATTGAAAAGCGGGCGCGGGCGCGAAGGCGCAGACCTGGCGCGGCTGCTCGACGAGCGTCTG
TCCTCCATCGTCGAAGAAGTCGCCACCTTGCGCACGCTGGTGCCACAGATGCTCGCAACCCAGCGGCAGAAGGTGCTGGA
TCGCTTTGCCGACATGAAAGCCGAGCTCGACCCTCAGCGTCTGGAGCAGGAAATGGTCCTGCTGGCACAGAAAAGCGATG
TCGCCGAAGAACTGGACCGCCTCAGCACCCACGTCACTGAAGTGCGCCGCGTACTCAAGGCTGGCGGCCAGGCAGGACGC
CGTCTTGATTTCCTGATGCAAGAGCTTAACCGCGAAGCGAATACACTGGGCTCCAAGGCCTTTGACCCACGCAGCACGCA
GGCTGCCGTCAACCTCAAAGTGTTGATCGAGCAGATGCGTGAGCAAGTGCAGAATATTGAGTAA

Upstream 100 bases:

>100_bases
CGCCTCTACAGCCAGCCGGCTTTCACGACGCCCATGACCGCCATTTCTGCGCGCTCATGAACCGAACCACGCTTTGAAAG
CGAACCAAGAGGTATTTCCC

Downstream 100 bases:

>100_bases
GGCTAAACCTGACATGACCCATATCACTGGCACCCTGTACATCATTTCCGCTCCGTCCGGCGCGGGCAAGACCAGTCTGG
TCAAGGCGCTGATGGACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MVHSMTAFARVERAGAQGTLSWELRSVNHRYLEPHLRLPESFRDLEGAIREALRQGLSRGKVECTLRFVEETAGKPLQVD
LERAGQLVAAAESVAGLIKQPAALNPLEVLAWPGVLVADANDPQVLNTEALKLFNDALTELKSGRGREGADLARLLDERL
SSIVEEVATLRTLVPQMLATQRQKVLDRFADMKAELDPQRLEQEMVLLAQKSDVAEELDRLSTHVTEVRRVLKAGGQAGR
RLDFLMQELNREANTLGSKAFDPRSTQAAVNLKVLIEQMREQVQNIE

Sequences:

>Translated_287_residues
MVHSMTAFARVERAGAQGTLSWELRSVNHRYLEPHLRLPESFRDLEGAIREALRQGLSRGKVECTLRFVEETAGKPLQVD
LERAGQLVAAAESVAGLIKQPAALNPLEVLAWPGVLVADANDPQVLNTEALKLFNDALTELKSGRGREGADLARLLDERL
SSIVEEVATLRTLVPQMLATQRQKVLDRFADMKAELDPQRLEQEMVLLAQKSDVAEELDRLSTHVTEVRRVLKAGGQAGR
RLDFLMQELNREANTLGSKAFDPRSTQAAVNLKVLIEQMREQVQNIE
>Mature_287_residues
MVHSMTAFARVERAGAQGTLSWELRSVNHRYLEPHLRLPESFRDLEGAIREALRQGLSRGKVECTLRFVEETAGKPLQVD
LERAGQLVAAAESVAGLIKQPAALNPLEVLAWPGVLVADANDPQVLNTEALKLFNDALTELKSGRGREGADLARLLDERL
SSIVEEVATLRTLVPQMLATQRQKVLDRFADMKAELDPQRLEQEMVLLAQKSDVAEELDRLSTHVTEVRRVLKAGGQAGR
RLDFLMQELNREANTLGSKAFDPRSTQAAVNLKVLIEQMREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=288, Percent_Identity=46.875, Blast_Score=254, Evalue=5e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 31957; Mature: 31957

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHSMTAFARVERAGAQGTLSWELRSVNHRYLEPHLRLPESFRDLEGAIREALRQGLSRG
CCCHHHHHHHHHHCCCCCCEEHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
KVECTLRFVEETAGKPLQVDLERAGQLVAAAESVAGLIKQPAALNPLEVLAWPGVLVADA
CHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEECC
NDPQVLNTEALKLFNDALTELKSGRGREGADLARLLDERLSSIVEEVATLRTLVPQMLAT
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQKVLDRFADMKAELDPQRLEQEMVLLAQKSDVAEELDRLSTHVTEVRRVLKAGGQAGR
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
RLDFLMQELNREANTLGSKAFDPRSTQAAVNLKVLIEQMREQVQNIE
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVHSMTAFARVERAGAQGTLSWELRSVNHRYLEPHLRLPESFRDLEGAIREALRQGLSRG
CCCHHHHHHHHHHCCCCCCEEHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
KVECTLRFVEETAGKPLQVDLERAGQLVAAAESVAGLIKQPAALNPLEVLAWPGVLVADA
CHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEECC
NDPQVLNTEALKLFNDALTELKSGRGREGADLARLLDERLSSIVEEVATLRTLVPQMLAT
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQKVLDRFADMKAELDPQRLEQEMVLLAQKSDVAEELDRLSTHVTEVRRVLKAGGQAGR
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
RLDFLMQELNREANTLGSKAFDPRSTQAAVNLKVLIEQMREQVQNIE
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]