Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is feaR [C]

Identifier: 66043279

GI number: 66043279

Start: 9410

End: 10384

Strand: Direct

Name: feaR [C]

Synonym: Psyr_0008

Alternate gene names: 66043279

Gene position: 9410-10384 (Clockwise)

Preceding gene: 66043275

Following gene: 66043284

Centisome position: 0.15

GC content: 56.0

Gene sequence:

>975_bases
ATGAGCATCTATTTCGATACCAACAGCATTGTCGTGCGGGAACGGGCAGAGTTCTGGCAGGAAGTGGTGTGCAGTACTTT
CGTGCCATTGGAATGTGCCTTCCCGGATCGACAAAACTTCCAGGGTCGTTTGCGCTCGCATAGCGTCGCAGGGCTTGGCT
TGGTTGAAGTACAGGCCTGCGAGCAGACGGTCGTTCGAGATACCTCGAGTATTTCGCGCAGTGACGACGAGTTCGTATTG
GTGAGTCTGGCGCTTGAAGGCCGGGCGCAGGTTTCTCAAGAGGGACGCGAAGCGATATTGGAGGTCGGCGACTTTGCTAT
CTACGACACTCGTCGCCCTTACCGACTGCACTTCGACAGTGCGTTCAGTCAGACCGTGGTGCAAATCCCGCGCAACAGTC
TGCAGCAGCGCCTGTGCAATCTGGAGTATCTGACCGCTTTATCCATGTCTCGCGATAACCCGCTCAATGGACTGGTCTTC
GACTTTTTTACCGGTCTCGCTGCACTCGAGAACCGGGTAGGCGAATCGCAGCAGGCGCGGATAACCGAGCAAGGGCTGGA
CTTGTTGGCAATGGCTTTGTCCGAAAGAGTCAAAGGGCAGGCACAAGGTTCGAGACGCAGTGGCTTACTGCTGCGCATTA
AGGACCATATTCAGGCCAACCTGGCAGATACAAAACTGTCTCTGGCCAGTGTCAGCGTCCGATTCGGAGTCAGCACGCGC
TATGTCAGCAGCCTGTTTCAGGATGAACAGACCTCGTTCGGGCGCTACCTGTTGGGCTCCCGGCTACAACGCTGCGCCAG
TGATCTGCGCGAGCCATTACTCGCCAATCGACAGATCAGCGAGATCGCCTGGCGTTGGGGATTCAGTGATGTCGCTTACT
TCAGCAGAGTCTTCCGCCAGCGCTTCGGAGTGCCTGCAAGGGAATATCGGCTTGAAACTTCGCCAACCCCCGGGCATAAA
AAACCGACCTCTTAA

Upstream 100 bases:

>100_bases
GAAAAGGAACGGCTTTTTGACTGGAAGGGATAGGCTGACAGGGATGGTTTCAGACTTGCATGGCGATTGGCTCGACGCAT
CGAAGTGCAGGTTGAACGCG

Downstream 100 bases:

>100_bases
AGGTCGGTTTCTGATACATCATCAAAACTTATGCACGTTTTTCCGGTTTTTATAGCCTGAAAAAATATGTATACGAATTA
ACAGGTTAGACAGTCTTTTT

Product: helix-turn-helix, AraC type

Products: NA

Alternate protein names: orf2 [H]

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSIYFDTNSIVVRERAEFWQEVVCSTFVPLECAFPDRQNFQGRLRSHSVAGLGLVEVQACEQTVVRDTSSISRSDDEFVL
VSLALEGRAQVSQEGREAILEVGDFAIYDTRRPYRLHFDSAFSQTVVQIPRNSLQQRLCNLEYLTALSMSRDNPLNGLVF
DFFTGLAALENRVGESQQARITEQGLDLLAMALSERVKGQAQGSRRSGLLLRIKDHIQANLADTKLSLASVSVRFGVSTR
YVSSLFQDEQTSFGRYLLGSRLQRCASDLREPLLANRQISEIAWRWGFSDVAYFSRVFRQRFGVPAREYRLETSPTPGHK
KPTS

Sequences:

>Translated_324_residues
MSIYFDTNSIVVRERAEFWQEVVCSTFVPLECAFPDRQNFQGRLRSHSVAGLGLVEVQACEQTVVRDTSSISRSDDEFVL
VSLALEGRAQVSQEGREAILEVGDFAIYDTRRPYRLHFDSAFSQTVVQIPRNSLQQRLCNLEYLTALSMSRDNPLNGLVF
DFFTGLAALENRVGESQQARITEQGLDLLAMALSERVKGQAQGSRRSGLLLRIKDHIQANLADTKLSLASVSVRFGVSTR
YVSSLFQDEQTSFGRYLLGSRLQRCASDLREPLLANRQISEIAWRWGFSDVAYFSRVFRQRFGVPAREYRLETSPTPGHK
KPTS
>Mature_323_residues
SIYFDTNSIVVRERAEFWQEVVCSTFVPLECAFPDRQNFQGRLRSHSVAGLGLVEVQACEQTVVRDTSSISRSDDEFVLV
SLALEGRAQVSQEGREAILEVGDFAIYDTRRPYRLHFDSAFSQTVVQIPRNSLQQRLCNLEYLTALSMSRDNPLNGLVFD
FFTGLAALENRVGESQQARITEQGLDLLAMALSERVKGQAQGSRRSGLLLRIKDHIQANLADTKLSLASVSVRFGVSTRY
VSSLFQDEQTSFGRYLLGSRLQRCASDLREPLLANRQISEIAWRWGFSDVAYFSRVFRQRFGVPAREYRLETSPTPGHKK
PTS

Specific function: Positive Regulator Of Tyna/Maoa And Feab/Pada, The Genes For 2-Phenylethylamine Catabolism. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787649, Length=274, Percent_Identity=25.9124087591241, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003313 [H]

Pfam domain/function: PF02311 AraC_binding [H]

EC number: NA

Molecular weight: Translated: 36621; Mature: 36490

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIYFDTNSIVVRERAEFWQEVVCSTFVPLECAFPDRQNFQGRLRSHSVAGLGLVEVQAC
CEEEEECCCEEEHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCHHHHHHH
EQTVVRDTSSISRSDDEFVLVSLALEGRAQVSQEGREAILEVGDFAIYDTRRPYRLHFDS
HHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCH
AFSQTVVQIPRNSLQQRLCNLEYLTALSMSRDNPLNGLVFDFFTGLAALENRVGESQQAR
HHHHHHHHCCHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
ITEQGLDLLAMALSERVKGQAQGSRRSGLLLRIKDHIQANLADTKLSLASVSVRFGVSTR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHEEEEECCHHH
YVSSLFQDEQTSFGRYLLGSRLQRCASDLREPLLANRQISEIAWRWGFSDVAYFSRVFRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH
RFGVPAREYRLETSPTPGHKKPTS
HHCCCHHHEEECCCCCCCCCCCCC
>Mature Secondary Structure 
SIYFDTNSIVVRERAEFWQEVVCSTFVPLECAFPDRQNFQGRLRSHSVAGLGLVEVQAC
EEEEECCCEEEHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCHHHHHHH
EQTVVRDTSSISRSDDEFVLVSLALEGRAQVSQEGREAILEVGDFAIYDTRRPYRLHFDS
HHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCH
AFSQTVVQIPRNSLQQRLCNLEYLTALSMSRDNPLNGLVFDFFTGLAALENRVGESQQAR
HHHHHHHHCCHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
ITEQGLDLLAMALSERVKGQAQGSRRSGLLLRIKDHIQANLADTKLSLASVSVRFGVSTR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHEEEEECCHHH
YVSSLFQDEQTSFGRYLLGSRLQRCASDLREPLLANRQISEIAWRWGFSDVAYFSRVFRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH
RFGVPAREYRLETSPTPGHKKPTS
HHCCCHHHEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10651646 [H]