| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is qor [C]
Identifier: 62391853
GI number: 62391853
Start: 3178526
End: 3179539
Strand: Reverse
Name: qor [C]
Synonym: cg3332
Alternate gene names: 62391853
Gene position: 3179539-3178526 (Counterclockwise)
Preceding gene: 62391856
Following gene: 62391852
Centisome position: 96.86
GC content: 50.89
Gene sequence:
>1014_bases ATGAGCGCGCAAATGGATACCCCTGATCCCACTATGTCTGCTGTTGCAATGTTAGATTCCATCCCTTCTGATCAACCAGA TTTCCTGATCGATGTAGAAGTAGATCGACCAACTCCCGGACCACATGATCTGCTAGTCCACATTGAGGCGGTCTCAATTA ACCCTGTTGATACCAAGGTACGCATGCGGGCCGGGAAGCAAAAGCATCCTAAAATTTTAGGTTTTGATGCTGCAGGTGAG GTGGTGGCTGTTGGATCGCAGGTCACGCTCTTCAATGTTGGTGACAAAGTGTTCTACGCAGGATCCAATCAGCGTCCAGG AAGTAACGCAGAGTACCAGGTGGTGGATGAACGGCTGGTGGGTCACGCACCACAAAGCTTGGGGGCACACGACGCCGCTG CTCTCCCACTTGTCGCGCTCACTGCATGGGAGTCACTTTTTGACCGATTGGGAGTAACTCAGTCAACTACTGGAACACTG TTGGTCTTGGGCGGTTCAGGAGGTGTGCCTTCAGCTCTTATTCAACTTGCTCGAGCTCTCACTGGTCTGAAAGTAGTGGC AACAGCTTCTCGCCCTGAATCACAAGAATGGGTGACAAAGCTCGGTGCTCATGAGGTGATTGATCACTCCAAGGATTTGA GTGAGCAAATCTCCGACGTGGATTTTGTTTTCAGCTCGTGGACTACTGGGCGTGAAGTAGAGCTCGCCACGTTGATGAAA CCCCAGTCCCACCTAGTGCTCATCGATGATCCAGTGGATCCCAATTTGGGCGCTTTTAAGCAAAAAGCGATCGCTTTGCA CTGGGAGTTCATGTTTACCCGCGCTATGTTCAACACTCCTGATATGGGTGAACAAGGGAAAATTCTGAATAAGATCGCCG ACATGGTTGATCGGGGTCAGTTTGAGTCCGTGACAGCAACGGTGCTGGATGGGCTCAACGCTGCAAACATCATGGAGGGG CACCGGCTCGTTGAGCAGGGTAAAACCTCAGGAAAAATTGTTGTGAGGGTATAA
Upstream 100 bases:
>100_bases GGCGTGCTAAAAAAGCACGTCAAATACAGAATCGGCAGATTACATCGCTGAGCAGAGAAAACACGGGCATGAAACGTACC CAAGGGCTAACATCGGGGGC
Downstream 100 bases:
>100_bases AGAGGACTTGAAAAATGCACCATCTACGCTATGAATCACCAATCGGAGAGCTTCTTCTTGTTGCAAGTGACCAAGGGCTA ACCTATGTGGCATTCTCCGA
Product: hypothetical protein
Products: NADP(+); Semiquinone. [C]
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSAQMDTPDPTMSAVAMLDSIPSDQPDFLIDVEVDRPTPGPHDLLVHIEAVSINPVDTKVRMRAGKQKHPKILGFDAAGE VVAVGSQVTLFNVGDKVFYAGSNQRPGSNAEYQVVDERLVGHAPQSLGAHDAAALPLVALTAWESLFDRLGVTQSTTGTL LVLGGSGGVPSALIQLARALTGLKVVATASRPESQEWVTKLGAHEVIDHSKDLSEQISDVDFVFSSWTTGREVELATLMK PQSHLVLIDDPVDPNLGAFKQKAIALHWEFMFTRAMFNTPDMGEQGKILNKIADMVDRGQFESVTATVLDGLNAANIMEG HRLVEQGKTSGKIVVRV
Sequences:
>Translated_337_residues MSAQMDTPDPTMSAVAMLDSIPSDQPDFLIDVEVDRPTPGPHDLLVHIEAVSINPVDTKVRMRAGKQKHPKILGFDAAGE VVAVGSQVTLFNVGDKVFYAGSNQRPGSNAEYQVVDERLVGHAPQSLGAHDAAALPLVALTAWESLFDRLGVTQSTTGTL LVLGGSGGVPSALIQLARALTGLKVVATASRPESQEWVTKLGAHEVIDHSKDLSEQISDVDFVFSSWTTGREVELATLMK PQSHLVLIDDPVDPNLGAFKQKAIALHWEFMFTRAMFNTPDMGEQGKILNKIADMVDRGQFESVTATVLDGLNAANIMEG HRLVEQGKTSGKIVVRV >Mature_336_residues SAQMDTPDPTMSAVAMLDSIPSDQPDFLIDVEVDRPTPGPHDLLVHIEAVSINPVDTKVRMRAGKQKHPKILGFDAAGEV VAVGSQVTLFNVGDKVFYAGSNQRPGSNAEYQVVDERLVGHAPQSLGAHDAAALPLVALTAWESLFDRLGVTQSTTGTLL VLGGSGGVPSALIQLARALTGLKVVATASRPESQEWVTKLGAHEVIDHSKDLSEQISDVDFVFSSWTTGREVELATLMKP QSHLVLIDDPVDPNLGAFKQKAIALHWEFMFTRAMFNTPDMGEQGKILNKIADMVDRGQFESVTATVLDGLNAANIMEGH RLVEQGKTSGKIVVRV
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI47519420, Length=336, Percent_Identity=29.7619047619048, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI194239674, Length=207, Percent_Identity=34.2995169082126, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI13236495, Length=207, Percent_Identity=34.2995169082126, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI194239676, Length=207, Percent_Identity=34.2995169082126, Blast_Score=96, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17507255, Length=187, Percent_Identity=37.4331550802139, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71987554, Length=168, Percent_Identity=30.952380952381, Blast_Score=75, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6323493, Length=206, Percent_Identity=31.5533980582524, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6319945, Length=206, Percent_Identity=31.5533980582524, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR014182 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: 1.6.5.5 [C]
Molecular weight: Translated: 36236; Mature: 36104
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQMDTPDPTMSAVAMLDSIPSDQPDFLIDVEVDRPTPGPHDLLVHIEAVSINPVDTKV CCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEECCCCHHH RMRAGKQKHPKILGFDAAGEVVAVGSQVTLFNVGDKVFYAGSNQRPGSNAEYQVVDERLV HHHCCCCCCCEEEEECCCCCEEEECCEEEEEECCCEEEECCCCCCCCCCCCCEEHHHHHH GHAPQSLGAHDAAALPLVALTAWESLFDRLGVTQSTTGTLLVLGGSGGVPSALIQLARAL CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHH TGLKVVATASRPESQEWVTKLGAHEVIDHSKDLSEQISDVDFVFSSWTTGREVELATLMK CCEEEEEECCCCCHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEHEECC PQSHLVLIDDPVDPNLGAFKQKAIALHWEFMFTRAMFNTPDMGEQGKILNKIADMVDRGQ CCCCEEEEECCCCCCCCHHHHHHEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC FESVTATVLDGLNAANIMEGHRLVEQGKTSGKIVVRV CHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure SAQMDTPDPTMSAVAMLDSIPSDQPDFLIDVEVDRPTPGPHDLLVHIEAVSINPVDTKV CCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEECCCCHHH RMRAGKQKHPKILGFDAAGEVVAVGSQVTLFNVGDKVFYAGSNQRPGSNAEYQVVDERLV HHHCCCCCCCEEEEECCCCCEEEECCEEEEEECCCEEEECCCCCCCCCCCCCEEHHHHHH GHAPQSLGAHDAAALPLVALTAWESLFDRLGVTQSTTGTLLVLGGSGGVPSALIQLARAL CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHH TGLKVVATASRPESQEWVTKLGAHEVIDHSKDLSEQISDVDFVFSSWTTGREVELATLMK CCEEEEEECCCCCHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEHEECC PQSHLVLIDDPVDPNLGAFKQKAIALHWEFMFTRAMFNTPDMGEQGKILNKIADMVDRGQ CCCCEEEEECCCCCCCCHHHHHHEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC FESVTATVLDGLNAANIMEGHRLVEQGKTSGKIVVRV CHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.017 {9,10-phenanthrenequinone}} 0.0153 {2,6-dichlorophenolindophenol}} 0.013 {2,6-dichlorophenolindophenol}} 0.26 {1,4-naphthoquinone}} 0.065 {1,4-benzoquinone}} 0.007 {NADPH}} 0.0069 {NADPH}} 0.0024 {1,2-naphthoquinone}} [C]
Substrates: NADPH; Quinone [C]
Specific reaction: NADPH + Quinone = NADP(+) + Semiquinone. [C]
General reaction: Oxidation; Reduction [C]
Inhibitor: 2, 3-Dimercaptopropanol; 2, 5-Dichloro-3, 6-dihydroxy -1, 4-benzoquinone; 4-Hydroxy coumarin; 5, 5'-Dithiobis (2-nitrobenzoate); ADP; Cibacronblue3GA; Coumarin; Cu2+; Dicoumarol warfarin, coumarin; Dithiothreitol preincubation with 9, 10-phenanthrenequino
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA