| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is pck [H]
Identifier: 62391702
GI number: 62391702
Start: 3025365
End: 3027197
Strand: Reverse
Name: pck [H]
Synonym: cg3169
Alternate gene names: 62391702
Gene position: 3027197-3025365 (Counterclockwise)
Preceding gene: 62391709
Following gene: 62391699
Centisome position: 92.22
GC content: 57.67
Gene sequence:
>1833_bases ATGACTACTGCTGCAATCAGGGGCCTTCAGGGCGAGGCGCCGACCAAGAATAAGGAACTGCTGAACTGGATCGCAGACGC CGTCGAGCTCTTCCAGCCTGAGGCTGTTGTGTTCGTTGATGGATCCCAGGCTGAGTGGGATCGCATGGCGGAGGATCTTG TTGAAGCCGGTACCCTCATCAAGCTCAACGAGGAAAAGCGTCCGAACAGCTACCTAGCTCGTTCCAACCCATCTGACGTT GCGCGCGTTGAGTCCCGCACCTTCATCTGCTCCGAGAAGGAAGAAGATGCTGGCCCAACCAACAACTGGGCTCCACCACA GGCAATGAAGGACGAAATGTCCAAGCATTACGCTGGTTCCATGAAGGGGCGCACCATGTACGTCGTGCCTTTCTGCATGG GTCCAATCAGCGATCCGGACCCTAAGCTTGGTGTGCAGCTCACTGACTCCGAGTACGTTGTCATGTCCATGCGCATCATG ACCCGCATGGGTATTGAAGCGCTGGACAAGATCGGCGCGAACGGCAGCTTCGTCAGGTGCCTCCACTCCGTTGGTGCTCC TTTGGAGCCAGGCCAGGAAGACGTTGCATGGCCTTGCAACGACACCAAGTACATCACCCAGTTCCCAGAGACCAAGGAAA TTTGGTCCTACGGTTCCGGCTACGGCGGAAACGCAATCCTGGCAAAGAAGTGCTACGCACTGCGTATCGCATCTGTCATG GCTCGCGAAGAAGGATGGATGGCTGAGCACATGCTCATCCTGAAGCTGATCAACCCAGAGGGCAAGGCGTACCACATCGC AGCAGCATTCCCATCTGCTTGTGGCAAGACCAACCTCGCCATGATCACTCCAACCATCCCAGGCTGGACCGCTCAGGTTG TTGGCGACGACATCGCTTGGCTGAAGCTGCGCGAGGACGGCCTCTACGCAGTTAACCCAGAAAATGGTTTCTTCGGTGTT GCTCCAGGCACCAACTACGCATCCAACCCAATCGCGATGAAGACCATGGAACCAGGCAACACCCTGTTCACCAACGTGGC ACTCACCGACGACGGCGACATCTGGTGGGAAGGCATGGACGGCGACGCCCCAGCTCACCTCATTGACTGGATGGGCAACG ACTGGACCCCAGAGTCCGACGAAAACGCTGCTCACCCTAACTCCCGTTACTGCGTAGCAATCGACCAGTCCCCAGCAGCA GCACCTGAGTTCAACGACTGGGAAGGCGTCAAGATCGACGCAATCCTCTTCGGTGGACGTCGCGCAGACACCGTCCCACT GGTTACCCAGACCTACGACTGGGAGCACGGCACCATGGTTGGTGCACTGCTCGCATCCGGTCAGACCGCAGCTTCCGCAG AAGCAAAGGTCGGCACACTCCGCCACGACCCAATGGCAATGCTCCCATTCATTGGCTACAACGCTGGTGAATACCTGCAG AACTGGATTGACATGGGTAACAAGGGTGGCGACAAGATGCCATCCATCTTCCTGGTCAACTGGTTCCGCCGTGGCGAAGA TGGACGCTTCCTGTGGCCTGGCTTCGGCGACAACTCTCGCGTTCTGAAGTGGGTCATCGACCGCATCGAAGGCCACGTTG GCGCAGACGAGACCGTTGTTGGACACACCGCTAAGGCCGAAGACCTCGACCTCGACGGCCTCGACACCCCAATTGAGGAT GTCAAGGAAGCACTGACCGCTCCTGCAGAGCAGTGGGCAAACGACGTTGAAGACAACGCCGAGTACCTCACTTTCCTCGG ACCACGTGTTCCTGCAGAGGTTCACAGCCAGTTCGATGCTCTGAAGGCCCGCATTTCAGCAGCTCACGCTTAA
Upstream 100 bases:
>100_bases ATGTGTCCGTTGTCTCACCTAAAGTTTTAACTAGTTCTGTATCTGAAAGCTACGCTAGGGGGCGAGAACTCTGTCGAATG ACACAAAATCTGGAGAAGTA
Downstream 100 bases:
>100_bases AGTTCACGCTTAAGAACTGCTAAATAACAAGAAAGGCTCCCACCGAAAGTGGGAGCCTTTCTTGTCGTTAAGCGATGAAT TCCTCAAAACCTCAGTGCTT
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MTTAAIRGLQGEAPTKNKELLNWIADAVELFQPEAVVFVDGSQAEWDRMAEDLVEAGTLIKLNEEKRPNSYLARSNPSDV ARVESRTFICSEKEEDAGPTNNWAPPQAMKDEMSKHYAGSMKGRTMYVVPFCMGPISDPDPKLGVQLTDSEYVVMSMRIM TRMGIEALDKIGANGSFVRCLHSVGAPLEPGQEDVAWPCNDTKYITQFPETKEIWSYGSGYGGNAILAKKCYALRIASVM AREEGWMAEHMLILKLINPEGKAYHIAAAFPSACGKTNLAMITPTIPGWTAQVVGDDIAWLKLREDGLYAVNPENGFFGV APGTNYASNPIAMKTMEPGNTLFTNVALTDDGDIWWEGMDGDAPAHLIDWMGNDWTPESDENAAHPNSRYCVAIDQSPAA APEFNDWEGVKIDAILFGGRRADTVPLVTQTYDWEHGTMVGALLASGQTAASAEAKVGTLRHDPMAMLPFIGYNAGEYLQ NWIDMGNKGGDKMPSIFLVNWFRRGEDGRFLWPGFGDNSRVLKWVIDRIEGHVGADETVVGHTAKAEDLDLDGLDTPIED VKEALTAPAEQWANDVEDNAEYLTFLGPRVPAEVHSQFDALKARISAAHA
Sequences:
>Translated_610_residues MTTAAIRGLQGEAPTKNKELLNWIADAVELFQPEAVVFVDGSQAEWDRMAEDLVEAGTLIKLNEEKRPNSYLARSNPSDV ARVESRTFICSEKEEDAGPTNNWAPPQAMKDEMSKHYAGSMKGRTMYVVPFCMGPISDPDPKLGVQLTDSEYVVMSMRIM TRMGIEALDKIGANGSFVRCLHSVGAPLEPGQEDVAWPCNDTKYITQFPETKEIWSYGSGYGGNAILAKKCYALRIASVM AREEGWMAEHMLILKLINPEGKAYHIAAAFPSACGKTNLAMITPTIPGWTAQVVGDDIAWLKLREDGLYAVNPENGFFGV APGTNYASNPIAMKTMEPGNTLFTNVALTDDGDIWWEGMDGDAPAHLIDWMGNDWTPESDENAAHPNSRYCVAIDQSPAA APEFNDWEGVKIDAILFGGRRADTVPLVTQTYDWEHGTMVGALLASGQTAASAEAKVGTLRHDPMAMLPFIGYNAGEYLQ NWIDMGNKGGDKMPSIFLVNWFRRGEDGRFLWPGFGDNSRVLKWVIDRIEGHVGADETVVGHTAKAEDLDLDGLDTPIED VKEALTAPAEQWANDVEDNAEYLTFLGPRVPAEVHSQFDALKARISAAHA >Mature_609_residues TTAAIRGLQGEAPTKNKELLNWIADAVELFQPEAVVFVDGSQAEWDRMAEDLVEAGTLIKLNEEKRPNSYLARSNPSDVA RVESRTFICSEKEEDAGPTNNWAPPQAMKDEMSKHYAGSMKGRTMYVVPFCMGPISDPDPKLGVQLTDSEYVVMSMRIMT RMGIEALDKIGANGSFVRCLHSVGAPLEPGQEDVAWPCNDTKYITQFPETKEIWSYGSGYGGNAILAKKCYALRIASVMA REEGWMAEHMLILKLINPEGKAYHIAAAFPSACGKTNLAMITPTIPGWTAQVVGDDIAWLKLREDGLYAVNPENGFFGVA PGTNYASNPIAMKTMEPGNTLFTNVALTDDGDIWWEGMDGDAPAHLIDWMGNDWTPESDENAAHPNSRYCVAIDQSPAAA PEFNDWEGVKIDAILFGGRRADTVPLVTQTYDWEHGTMVGALLASGQTAASAEAKVGTLRHDPMAMLPFIGYNAGEYLQN WIDMGNKGGDKMPSIFLVNWFRRGEDGRFLWPGFGDNSRVLKWVIDRIEGHVGADETVVGHTAKAEDLDLDGLDTPIEDV KEALTAPAEQWANDVEDNAEYLTFLGPRVPAEVHSQFDALKARISAAHA
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle [H]
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family [H]
Homologues:
Organism=Homo sapiens, GI66346721, Length=619, Percent_Identity=47.9806138933764, Blast_Score=565, Evalue=1e-161, Organism=Homo sapiens, GI187281517, Length=613, Percent_Identity=46.6557911908646, Blast_Score=554, Evalue=1e-157, Organism=Homo sapiens, GI66346723, Length=411, Percent_Identity=47.4452554744526, Blast_Score=367, Evalue=1e-101, Organism=Caenorhabditis elegans, GI17555492, Length=626, Percent_Identity=46.4856230031949, Blast_Score=552, Evalue=1e-157, Organism=Caenorhabditis elegans, GI71989645, Length=617, Percent_Identity=45.8670988654781, Blast_Score=540, Evalue=1e-154, Organism=Caenorhabditis elegans, GI71989658, Length=617, Percent_Identity=45.8670988654781, Blast_Score=539, Evalue=1e-153, Organism=Caenorhabditis elegans, GI71989653, Length=595, Percent_Identity=46.5546218487395, Blast_Score=531, Evalue=1e-151, Organism=Caenorhabditis elegans, GI32564411, Length=556, Percent_Identity=48.7410071942446, Blast_Score=523, Evalue=1e-148, Organism=Caenorhabditis elegans, GI32564407, Length=524, Percent_Identity=49.618320610687, Blast_Score=501, Evalue=1e-142, Organism=Caenorhabditis elegans, GI71989649, Length=516, Percent_Identity=46.8992248062016, Blast_Score=473, Evalue=1e-133, Organism=Caenorhabditis elegans, GI32564409, Length=370, Percent_Identity=47.8378378378378, Blast_Score=335, Evalue=4e-92, Organism=Caenorhabditis elegans, GI17540956, Length=334, Percent_Identity=27.2455089820359, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24655085, Length=597, Percent_Identity=48.4087102177554, Blast_Score=573, Evalue=1e-163, Organism=Drosophila melanogaster, GI24655082, Length=611, Percent_Identity=47.4631751227496, Blast_Score=561, Evalue=1e-160, Organism=Drosophila melanogaster, GI161077226, Length=569, Percent_Identity=48.8576449912127, Blast_Score=540, Evalue=1e-153, Organism=Drosophila melanogaster, GI24655088, Length=502, Percent_Identity=49.601593625498, Blast_Score=503, Evalue=1e-142,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 [H]
Pfam domain/function: PF00821 PEPCK [H]
EC number: =4.1.1.32 [H]
Molecular weight: Translated: 66875; Mature: 66744
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00505 PEPCK_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAAIRGLQGEAPTKNKELLNWIADAVELFQPEAVVFVDGSQAEWDRMAEDLVEAGTLI CCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCEE KLNEEKRPNSYLARSNPSDVARVESRTFICSEKEEDAGPTNNWAPPQAMKDEMSKHYAGS EECCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCC MKGRTMYVVPFCMGPISDPDPKLGVQLTDSEYVVMSMRIMTRMGIEALDKIGANGSFVRC CCCCEEEEEEEECCCCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHH LHSVGAPLEPGQEDVAWPCNDTKYITQFPETKEIWSYGSGYGGNAILAKKCYALRIASVM HHHCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AREEGWMAEHMLILKLINPEGKAYHIAAAFPSACGKTNLAMITPTIPGWTAQVVGDDIAW HHHCCCHHHEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCCCCEEEECCCCEEE LKLREDGLYAVNPENGFFGVAPGTNYASNPIAMKTMEPGNTLFTNVALTDDGDIWWEGMD EEEECCCEEEECCCCCEEECCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEECCC GDAPAHLIDWMGNDWTPESDENAAHPNSRYCVAIDQSPAAAPEFNDWEGVKIDAILFGGR CCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCC RADTVPLVTQTYDWEHGTMVGALLASGQTAASAEAKVGTLRHDPMAMLPFIGYNAGEYLQ CCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHH NWIDMGNKGGDKMPSIFLVNWFRRGEDGRFLWPGFGDNSRVLKWVIDRIEGHVGADETVV HHHHCCCCCCCCCCEEEEEEHHHCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCEEE GHTAKAEDLDLDGLDTPIEDVKEALTAPAEQWANDVEDNAEYLTFLGPRVPAEVHSQFDA CCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH LKARISAAHA HHHHHHHCCC >Mature Secondary Structure TTAAIRGLQGEAPTKNKELLNWIADAVELFQPEAVVFVDGSQAEWDRMAEDLVEAGTLI CCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCEE KLNEEKRPNSYLARSNPSDVARVESRTFICSEKEEDAGPTNNWAPPQAMKDEMSKHYAGS EECCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCC MKGRTMYVVPFCMGPISDPDPKLGVQLTDSEYVVMSMRIMTRMGIEALDKIGANGSFVRC CCCCEEEEEEEECCCCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHH LHSVGAPLEPGQEDVAWPCNDTKYITQFPETKEIWSYGSGYGGNAILAKKCYALRIASVM HHHCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AREEGWMAEHMLILKLINPEGKAYHIAAAFPSACGKTNLAMITPTIPGWTAQVVGDDIAW HHHCCCHHHEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCCCCEEEECCCCEEE LKLREDGLYAVNPENGFFGVAPGTNYASNPIAMKTMEPGNTLFTNVALTDDGDIWWEGMD EEEECCCEEEECCCCCEEECCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEECCC GDAPAHLIDWMGNDWTPESDENAAHPNSRYCVAIDQSPAAAPEFNDWEGVKIDAILFGGR CCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCC RADTVPLVTQTYDWEHGTMVGALLASGQTAASAEAKVGTLRHDPMAMLPFIGYNAGEYLQ CCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHH NWIDMGNKGGDKMPSIFLVNWFRRGEDGRFLWPGFGDNSRVLKWVIDRIEGHVGADETVV HHHHCCCCCCCCCCEEEEEEHHHCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCEEE GHTAKAEDLDLDGLDTPIEDVKEALTAPAEQWANDVEDNAEYLTFLGPRVPAEVHSQFDA CCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH LKARISAAHA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12840036 [H]