| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is pimB [H]
Identifier: 62391699
GI number: 62391699
Start: 3022759
End: 3023862
Strand: Reverse
Name: pimB [H]
Synonym: cg3166
Alternate gene names: 62391699
Gene position: 3023862-3022759 (Counterclockwise)
Preceding gene: 62391702
Following gene: 62391696
Centisome position: 92.11
GC content: 59.87
Gene sequence:
>1104_bases ATGAAGATCCTTTTGTTGTGCTGGCGTGATACCACTCATCCTCAAGGTGGCGGAAGTGAACGCTATCTGGAGCGGGTGGG TGAGTTTTTGGCGGATCAGGGCCATGAGGTGGTGTTTCGTACTGCTGGGCACACGGATGCGCCACGGCGTTCTTTCCGCG ATGGTGTGAGGTATTCCAGGAGCGGTGGGAAGTTTAGTGTGTATCCCAAGGCGTGGGTGGCCATGATGTTGGGTCGTGTG GGGATTGGCACGTTTTCCAAGGTTGATGTGGTGGTGGATACGCAGAATGGCATTCCGTTTTTTGGAAAGTTTTTCTCCGG TAAGCCGACTGTGTTGCTCACGCATCATTGCCATAAGGAGCAGTGGCCGGTGGTGGGTCGGGTGCTGGCGAAGGTTGGTT GGCTGATTGAGAGCCAGATCGCGCCGCGCGCTTACAAAACTGCGCCGTATGTGACTGTTTCAGAGCCGAGCGCTGAGGAG CTCATTGCGTTGGGTGTGGATCAGCAGCGGATTCATATCGTGCGCAATGGCGTGGATCCCGTGCCGCTGCACACGCCGAA GCTGGATCGCGATGGCCAGCATGCGGTGACGTTGTCGCGCCTGGTTCCGCACAAGCAGATTGAGCATGCGATGGATGTCG TCGCGGCGCTCGACGGCGTGGTGCTGGATGTAGTCGGAAGCGGTTGGTGGCAGGAGGAACTGGTCGATTATGCCCGCACG CTGGGTGTGAGCGATCGCGTGGTTTTCCACGGCCAGGTCGCCGAGGATCACAAGCACGCCCTGCTGGAGCGCGCCACGAT TCATCTCATGCCTTCGCGCAAGGAAGGCTGGGGCCTGGCGGTCACGGAGGCGGCGCAGCACGGCGTTCCGACGATCGGTT ACCGAAGCTCAGGCGGCCTGCGCGATTCCGTCGTCGACGGCGAAACCGGCCTGCTTGTCGACTCCAAGGCCGAGCTTATT TCAGCCACCAAAACCCTGCTTATCGACGCCTCCCTCCGCTCCAAGCTCGGCGCCAGCGCGAAGCAGCGCGCCGAAAACTA CAAGTGGGACACCGCGGGAGCGCAGTTCGAGGAACTACTTCTTGGTCTTGCGTCGAAAAAGTAG
Upstream 100 bases:
>100_bases GCGGATTTGTGCGGGGGAGTGGGTGGGAGAGAAAACGGTGATCGTTGTGGCCATGGCTTCCATTATGGCTTGTTTAAAAG CAGCTAGACTGAATAACCCT
Downstream 100 bases:
>100_bases TCCCAGCGGCAACGCCATCCACAGCACGGTCAGGCCCACACCGAGGTAGTATTTCCAGCCATGCTGCGGTGGTGCGCCAG TTTCTGTGATCGTATCTCCA
Product: glycosyltransferase
Products: NA
Alternate protein names: Alpha-D-mannose-alpha-(1-6)-phosphatidylmyo-inositol-mannosyltransferase; Alpha-mannosyltransferase; Alpha-manT; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MKILLLCWRDTTHPQGGGSERYLERVGEFLADQGHEVVFRTAGHTDAPRRSFRDGVRYSRSGGKFSVYPKAWVAMMLGRV GIGTFSKVDVVVDTQNGIPFFGKFFSGKPTVLLTHHCHKEQWPVVGRVLAKVGWLIESQIAPRAYKTAPYVTVSEPSAEE LIALGVDQQRIHIVRNGVDPVPLHTPKLDRDGQHAVTLSRLVPHKQIEHAMDVVAALDGVVLDVVGSGWWQEELVDYART LGVSDRVVFHGQVAEDHKHALLERATIHLMPSRKEGWGLAVTEAAQHGVPTIGYRSSGGLRDSVVDGETGLLVDSKAELI SATKTLLIDASLRSKLGASAKQRAENYKWDTAGAQFEELLLGLASKK
Sequences:
>Translated_367_residues MKILLLCWRDTTHPQGGGSERYLERVGEFLADQGHEVVFRTAGHTDAPRRSFRDGVRYSRSGGKFSVYPKAWVAMMLGRV GIGTFSKVDVVVDTQNGIPFFGKFFSGKPTVLLTHHCHKEQWPVVGRVLAKVGWLIESQIAPRAYKTAPYVTVSEPSAEE LIALGVDQQRIHIVRNGVDPVPLHTPKLDRDGQHAVTLSRLVPHKQIEHAMDVVAALDGVVLDVVGSGWWQEELVDYART LGVSDRVVFHGQVAEDHKHALLERATIHLMPSRKEGWGLAVTEAAQHGVPTIGYRSSGGLRDSVVDGETGLLVDSKAELI SATKTLLIDASLRSKLGASAKQRAENYKWDTAGAQFEELLLGLASKK >Mature_367_residues MKILLLCWRDTTHPQGGGSERYLERVGEFLADQGHEVVFRTAGHTDAPRRSFRDGVRYSRSGGKFSVYPKAWVAMMLGRV GIGTFSKVDVVVDTQNGIPFFGKFFSGKPTVLLTHHCHKEQWPVVGRVLAKVGWLIESQIAPRAYKTAPYVTVSEPSAEE LIALGVDQQRIHIVRNGVDPVPLHTPKLDRDGQHAVTLSRLVPHKQIEHAMDVVAALDGVVLDVVGSGWWQEELVDYART LGVSDRVVFHGQVAEDHKHALLERATIHLMPSRKEGWGLAVTEAAQHGVPTIGYRSSGGLRDSVVDGETGLLVDSKAELI SATKTLLIDASLRSKLGASAKQRAENYKWDTAGAQFEELLLGLASKK
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose resid
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.57 [H]
Molecular weight: Translated: 40315; Mature: 40315
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILLLCWRDTTHPQGGGSERYLERVGEFLADQGHEVVFRTAGHTDAPRRSFRDGVRYSR CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCC SGGKFSVYPKAWVAMMLGRVGIGTFSKVDVVVDTQNGIPFFGKFFSGKPTVLLTHHCHKE CCCEEEECHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCEEEEECCCCC QWPVVGRVLAKVGWLIESQIAPRAYKTAPYVTVSEPSAEELIALGVDQQRIHIVRNGVDP CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHEEECCCHHHHHHHHCCCCC VPLHTPKLDRDGQHAVTLSRLVPHKQIEHAMDVVAALDGVVLDVVGSGWWQEELVDYART CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEHHCCCCCHHHHHHHHHH LGVSDRVVFHGQVAEDHKHALLERATIHLMPSRKEGWGLAVTEAAQHGVPTIGYRSSGGL CCCCCEEEEECCCHHHHHHHHHHHHEEEEECCCCCCCCEEEEHHHHCCCCCCCCCCCCCC RDSVVDGETGLLVDSKAELISATKTLLIDASLRSKLGASAKQRAENYKWDTAGAQFEELL CCCCCCCCCCEEECCHHHHHHHHHHHEEEHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHH LGLASKK HHHHCCC >Mature Secondary Structure MKILLLCWRDTTHPQGGGSERYLERVGEFLADQGHEVVFRTAGHTDAPRRSFRDGVRYSR CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCC SGGKFSVYPKAWVAMMLGRVGIGTFSKVDVVVDTQNGIPFFGKFFSGKPTVLLTHHCHKE CCCEEEECHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCEEEEECCCCC QWPVVGRVLAKVGWLIESQIAPRAYKTAPYVTVSEPSAEELIALGVDQQRIHIVRNGVDP CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHEEECCCHHHHHHHHCCCCC VPLHTPKLDRDGQHAVTLSRLVPHKQIEHAMDVVAALDGVVLDVVGSGWWQEELVDYART CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEHHCCCCCHHHHHHHHHH LGVSDRVVFHGQVAEDHKHALLERATIHLMPSRKEGWGLAVTEAAQHGVPTIGYRSSGGL CCCCCEEEEECCCHHHHHHHHHHHHEEEEECCCCCCCCEEEEHHHHCCCCCCCCCCCCCC RDSVVDGETGLLVDSKAELISATKTLLIDASLRSKLGASAKQRAENYKWDTAGAQFEELL CCCCCCCCCCEEECCHHHHHHHHHHHEEEHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHH LGLASKK HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]