Definition Corynebacterium glutamicum ATCC 13032, complete genome.
Accession NC_006958
Length 3,282,708

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The map label for this gene is pimB [H]

Identifier: 62391699

GI number: 62391699

Start: 3022759

End: 3023862

Strand: Reverse

Name: pimB [H]

Synonym: cg3166

Alternate gene names: 62391699

Gene position: 3023862-3022759 (Counterclockwise)

Preceding gene: 62391702

Following gene: 62391696

Centisome position: 92.11

GC content: 59.87

Gene sequence:

>1104_bases
ATGAAGATCCTTTTGTTGTGCTGGCGTGATACCACTCATCCTCAAGGTGGCGGAAGTGAACGCTATCTGGAGCGGGTGGG
TGAGTTTTTGGCGGATCAGGGCCATGAGGTGGTGTTTCGTACTGCTGGGCACACGGATGCGCCACGGCGTTCTTTCCGCG
ATGGTGTGAGGTATTCCAGGAGCGGTGGGAAGTTTAGTGTGTATCCCAAGGCGTGGGTGGCCATGATGTTGGGTCGTGTG
GGGATTGGCACGTTTTCCAAGGTTGATGTGGTGGTGGATACGCAGAATGGCATTCCGTTTTTTGGAAAGTTTTTCTCCGG
TAAGCCGACTGTGTTGCTCACGCATCATTGCCATAAGGAGCAGTGGCCGGTGGTGGGTCGGGTGCTGGCGAAGGTTGGTT
GGCTGATTGAGAGCCAGATCGCGCCGCGCGCTTACAAAACTGCGCCGTATGTGACTGTTTCAGAGCCGAGCGCTGAGGAG
CTCATTGCGTTGGGTGTGGATCAGCAGCGGATTCATATCGTGCGCAATGGCGTGGATCCCGTGCCGCTGCACACGCCGAA
GCTGGATCGCGATGGCCAGCATGCGGTGACGTTGTCGCGCCTGGTTCCGCACAAGCAGATTGAGCATGCGATGGATGTCG
TCGCGGCGCTCGACGGCGTGGTGCTGGATGTAGTCGGAAGCGGTTGGTGGCAGGAGGAACTGGTCGATTATGCCCGCACG
CTGGGTGTGAGCGATCGCGTGGTTTTCCACGGCCAGGTCGCCGAGGATCACAAGCACGCCCTGCTGGAGCGCGCCACGAT
TCATCTCATGCCTTCGCGCAAGGAAGGCTGGGGCCTGGCGGTCACGGAGGCGGCGCAGCACGGCGTTCCGACGATCGGTT
ACCGAAGCTCAGGCGGCCTGCGCGATTCCGTCGTCGACGGCGAAACCGGCCTGCTTGTCGACTCCAAGGCCGAGCTTATT
TCAGCCACCAAAACCCTGCTTATCGACGCCTCCCTCCGCTCCAAGCTCGGCGCCAGCGCGAAGCAGCGCGCCGAAAACTA
CAAGTGGGACACCGCGGGAGCGCAGTTCGAGGAACTACTTCTTGGTCTTGCGTCGAAAAAGTAG

Upstream 100 bases:

>100_bases
GCGGATTTGTGCGGGGGAGTGGGTGGGAGAGAAAACGGTGATCGTTGTGGCCATGGCTTCCATTATGGCTTGTTTAAAAG
CAGCTAGACTGAATAACCCT

Downstream 100 bases:

>100_bases
TCCCAGCGGCAACGCCATCCACAGCACGGTCAGGCCCACACCGAGGTAGTATTTCCAGCCATGCTGCGGTGGTGCGCCAG
TTTCTGTGATCGTATCTCCA

Product: glycosyltransferase

Products: NA

Alternate protein names: Alpha-D-mannose-alpha-(1-6)-phosphatidylmyo-inositol-mannosyltransferase; Alpha-mannosyltransferase; Alpha-manT; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MKILLLCWRDTTHPQGGGSERYLERVGEFLADQGHEVVFRTAGHTDAPRRSFRDGVRYSRSGGKFSVYPKAWVAMMLGRV
GIGTFSKVDVVVDTQNGIPFFGKFFSGKPTVLLTHHCHKEQWPVVGRVLAKVGWLIESQIAPRAYKTAPYVTVSEPSAEE
LIALGVDQQRIHIVRNGVDPVPLHTPKLDRDGQHAVTLSRLVPHKQIEHAMDVVAALDGVVLDVVGSGWWQEELVDYART
LGVSDRVVFHGQVAEDHKHALLERATIHLMPSRKEGWGLAVTEAAQHGVPTIGYRSSGGLRDSVVDGETGLLVDSKAELI
SATKTLLIDASLRSKLGASAKQRAENYKWDTAGAQFEELLLGLASKK

Sequences:

>Translated_367_residues
MKILLLCWRDTTHPQGGGSERYLERVGEFLADQGHEVVFRTAGHTDAPRRSFRDGVRYSRSGGKFSVYPKAWVAMMLGRV
GIGTFSKVDVVVDTQNGIPFFGKFFSGKPTVLLTHHCHKEQWPVVGRVLAKVGWLIESQIAPRAYKTAPYVTVSEPSAEE
LIALGVDQQRIHIVRNGVDPVPLHTPKLDRDGQHAVTLSRLVPHKQIEHAMDVVAALDGVVLDVVGSGWWQEELVDYART
LGVSDRVVFHGQVAEDHKHALLERATIHLMPSRKEGWGLAVTEAAQHGVPTIGYRSSGGLRDSVVDGETGLLVDSKAELI
SATKTLLIDASLRSKLGASAKQRAENYKWDTAGAQFEELLLGLASKK
>Mature_367_residues
MKILLLCWRDTTHPQGGGSERYLERVGEFLADQGHEVVFRTAGHTDAPRRSFRDGVRYSRSGGKFSVYPKAWVAMMLGRV
GIGTFSKVDVVVDTQNGIPFFGKFFSGKPTVLLTHHCHKEQWPVVGRVLAKVGWLIESQIAPRAYKTAPYVTVSEPSAEE
LIALGVDQQRIHIVRNGVDPVPLHTPKLDRDGQHAVTLSRLVPHKQIEHAMDVVAALDGVVLDVVGSGWWQEELVDYART
LGVSDRVVFHGQVAEDHKHALLERATIHLMPSRKEGWGLAVTEAAQHGVPTIGYRSSGGLRDSVVDGETGLLVDSKAELI
SATKTLLIDASLRSKLGASAKQRAENYKWDTAGAQFEELLLGLASKK

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose resid

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.57 [H]

Molecular weight: Translated: 40315; Mature: 40315

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILLLCWRDTTHPQGGGSERYLERVGEFLADQGHEVVFRTAGHTDAPRRSFRDGVRYSR
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCC
SGGKFSVYPKAWVAMMLGRVGIGTFSKVDVVVDTQNGIPFFGKFFSGKPTVLLTHHCHKE
CCCEEEECHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCEEEEECCCCC
QWPVVGRVLAKVGWLIESQIAPRAYKTAPYVTVSEPSAEELIALGVDQQRIHIVRNGVDP
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHEEECCCHHHHHHHHCCCCC
VPLHTPKLDRDGQHAVTLSRLVPHKQIEHAMDVVAALDGVVLDVVGSGWWQEELVDYART
CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEHHCCCCCHHHHHHHHHH
LGVSDRVVFHGQVAEDHKHALLERATIHLMPSRKEGWGLAVTEAAQHGVPTIGYRSSGGL
CCCCCEEEEECCCHHHHHHHHHHHHEEEEECCCCCCCCEEEEHHHHCCCCCCCCCCCCCC
RDSVVDGETGLLVDSKAELISATKTLLIDASLRSKLGASAKQRAENYKWDTAGAQFEELL
CCCCCCCCCCEEECCHHHHHHHHHHHEEEHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHH
LGLASKK
HHHHCCC
>Mature Secondary Structure
MKILLLCWRDTTHPQGGGSERYLERVGEFLADQGHEVVFRTAGHTDAPRRSFRDGVRYSR
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCC
SGGKFSVYPKAWVAMMLGRVGIGTFSKVDVVVDTQNGIPFFGKFFSGKPTVLLTHHCHKE
CCCEEEECHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCEEEEECCCCC
QWPVVGRVLAKVGWLIESQIAPRAYKTAPYVTVSEPSAEELIALGVDQQRIHIVRNGVDP
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHEEECCCHHHHHHHHCCCCC
VPLHTPKLDRDGQHAVTLSRLVPHKQIEHAMDVVAALDGVVLDVVGSGWWQEELVDYART
CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEHHCCCCCHHHHHHHHHH
LGVSDRVVFHGQVAEDHKHALLERATIHLMPSRKEGWGLAVTEAAQHGVPTIGYRSSGGL
CCCCCEEEEECCCHHHHHHHHHHHHEEEEECCCCCCCCEEEEHHHHCCCCCCCCCCCCCC
RDSVVDGETGLLVDSKAELISATKTLLIDASLRSKLGASAKQRAENYKWDTAGAQFEELL
CCCCCCCCCCEEECCHHHHHHHHHHHEEEHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHH
LGLASKK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]