| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is ilvA
Identifier: 62390963
GI number: 62390963
Start: 2214893
End: 2216203
Strand: Reverse
Name: ilvA
Synonym: cg2334
Alternate gene names: 62390963
Gene position: 2216203-2214893 (Counterclockwise)
Preceding gene: 62390965
Following gene: 62390961
Centisome position: 67.51
GC content: 55.3
Gene sequence:
>1311_bases ATGAGTGAAACATACGTGTCTGAGAAAAGTCCAGGAGTGATGGCTAGCGGAGCGGAGCTGATTCGTGCCGCCGACATTCA AACGGCGCAGGCACGAATTTCCTCCGTCATTGCACCAACTCCATTGCAGTATTGCCCTCGTCTTTCTGAGGAAACCGGAG CGGAAATCTACCTTAAGCGTGAGGATCTGCAGGATGTTCGTTCCTACAAGATCCGCGGTGCGCTGAACTCTGGAGCGCAG CTCACCCAAGAGCAGCGCGATGCAGGTATCGTTGCCGCATCTGCAGGTAACCATGCCCAGGGCGTGGCCTATGTGTGCAA GTCCTTGGGCGTTCAGGGACGCATCTATGTTCCTGTGCAGACTCCAAAGCAAAAGCGTGACCGCATCATGGTTCACGGCG GAGAGTTTGTCTCCTTGGTGGTCACTGGCAATAACTTCGACGAAGCATCGGCTGCAGCGCATGAAGATGCAGAGCGCACC GGCGCAACGCTGATCGAGCCTTTCGATGCTCGCAACACCGTCATCGGTCAGGGCACCGTGGCTGCTGAGATCTTGTCGCA GCTGACTTCCATGGGCAAGAGTGCAGATCACGTGATGGTTCCAGTCGGCGGTGGCGGACTTCTTGCAGGTGTGGTCAGCT ACATGGCTGATATGGCACCTCGCACTGCGATCGTTGGTATCGAACCAGCGGGAGCAGCATCCATGCAGGCTGCATTGCAC AATGGTGGACCAATCACTTTGGAGACTGTTGATCCCTTTGTGGACGGCGCAGCAGTCAAACGTGTCGGAGATCTCAACTA CACCATCGTGGAGAAGAACCAGGGTCGCGTGCACATGATGAGCGCGACCGAGGGCGCTGTGTGTACTGAGATGCTCGATC TTTACCAAAACGAAGGCATCATCGCGGAGCCTGCTGGCGCGCTGTCTATCGCTGGGTTGAAGGAAATGTCCTTTGCACCT GGTTCTGTCGTGGTGTGCATCATCTCTGGTGGCAACAACGATGTGCTGCGTTATGCGGAAATCGCTGAGCGCTCCTTGGT GCACCGCGGTTTGAAGCACTACTTCTTGGTGAACTTCCCGCAAAAGCCTGGTCAGTTGCGTCACTTCCTGGAAGATATCC TGGGACCGGATGATGACATCACGCTGTTTGAGTACCTCAAGCGCAACAACCGTGAGACCGGTACTGCGTTGGTGGGTATT CACTTGAGTGAAGCATCAGGATTGGATTCTTTGCTGGAACGTATGGAGGAATCGGCAATTGATTCCCGTCGCCTCGAGCC GGGCACCCCTGAGTACGAATACTTGACCTAA
Upstream 100 bases:
>100_bases CTAGAAAACAATCTATAGCATTGTTCTACAAAGAGCTTGTTGGAAATAAAACCTATGCCAAAGTAGGTGCAATTCTAGGA GAAGATTACACTAGTCAACC
Downstream 100 bases:
>100_bases ACATAGCTGAAGGCCACCTCAATCGAGGTGGCCTTTTTCTAGTTTCGGGTCAGGATCGCAAAGCCCCACGGCTGAAGGGT TGTGGAGGTGTCGGTGACGG
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MSETYVSEKSPGVMASGAELIRAADIQTAQARISSVIAPTPLQYCPRLSEETGAEIYLKREDLQDVRSYKIRGALNSGAQ LTQEQRDAGIVAASAGNHAQGVAYVCKSLGVQGRIYVPVQTPKQKRDRIMVHGGEFVSLVVTGNNFDEASAAAHEDAERT GATLIEPFDARNTVIGQGTVAAEILSQLTSMGKSADHVMVPVGGGGLLAGVVSYMADMAPRTAIVGIEPAGAASMQAALH NGGPITLETVDPFVDGAAVKRVGDLNYTIVEKNQGRVHMMSATEGAVCTEMLDLYQNEGIIAEPAGALSIAGLKEMSFAP GSVVVCIISGGNNDVLRYAEIAERSLVHRGLKHYFLVNFPQKPGQLRHFLEDILGPDDDITLFEYLKRNNRETGTALVGI HLSEASGLDSLLERMEESAIDSRRLEPGTPEYEYLT
Sequences:
>Translated_436_residues MSETYVSEKSPGVMASGAELIRAADIQTAQARISSVIAPTPLQYCPRLSEETGAEIYLKREDLQDVRSYKIRGALNSGAQ LTQEQRDAGIVAASAGNHAQGVAYVCKSLGVQGRIYVPVQTPKQKRDRIMVHGGEFVSLVVTGNNFDEASAAAHEDAERT GATLIEPFDARNTVIGQGTVAAEILSQLTSMGKSADHVMVPVGGGGLLAGVVSYMADMAPRTAIVGIEPAGAASMQAALH NGGPITLETVDPFVDGAAVKRVGDLNYTIVEKNQGRVHMMSATEGAVCTEMLDLYQNEGIIAEPAGALSIAGLKEMSFAP GSVVVCIISGGNNDVLRYAEIAERSLVHRGLKHYFLVNFPQKPGQLRHFLEDILGPDDDITLFEYLKRNNRETGTALVGI HLSEASGLDSLLERMEESAIDSRRLEPGTPEYEYLT >Mature_435_residues SETYVSEKSPGVMASGAELIRAADIQTAQARISSVIAPTPLQYCPRLSEETGAEIYLKREDLQDVRSYKIRGALNSGAQL TQEQRDAGIVAASAGNHAQGVAYVCKSLGVQGRIYVPVQTPKQKRDRIMVHGGEFVSLVVTGNNFDEASAAAHEDAERTG ATLIEPFDARNTVIGQGTVAAEILSQLTSMGKSADHVMVPVGGGGLLAGVVSYMADMAPRTAIVGIEPAGAASMQAALHN GGPITLETVDPFVDGAAVKRVGDLNYTIVEKNQGRVHMMSATEGAVCTEMLDLYQNEGIIAEPAGALSIAGLKEMSFAPG SVVVCIISGGNNDVLRYAEIAERSLVHRGLKHYFLVNFPQKPGQLRHFLEDILGPDDDITLFEYLKRNNRETGTALVGIH LSEASGLDSLLERMEESAIDSRRLEPGTPEYEYLT
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia. Deaminates L-threonine, but also L-serine to a lesser extent
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family
Homologues:
Organism=Homo sapiens, GI11345492, Length=335, Percent_Identity=27.7611940298507, Blast_Score=115, Evalue=1e-25, Organism=Escherichia coli, GI1790207, Length=392, Percent_Identity=35.969387755102, Blast_Score=193, Evalue=1e-50, Organism=Escherichia coli, GI1789505, Length=320, Percent_Identity=33.4375, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1789235, Length=244, Percent_Identity=25.8196721311475, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71991565, Length=347, Percent_Identity=30.2593659942363, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17537387, Length=399, Percent_Identity=29.3233082706767, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17508781, Length=283, Percent_Identity=29.3286219081272, Blast_Score=110, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6320930, Length=376, Percent_Identity=35.3723404255319, Blast_Score=196, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6322631, Length=320, Percent_Identity=31.875, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6319788, Length=236, Percent_Identity=27.5423728813559, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI21355833, Length=345, Percent_Identity=31.0144927536232, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI24645328, Length=228, Percent_Identity=30.7017543859649, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): THD1_CORGL (Q04513)
Other databases:
- EMBL: L01508 - EMBL: BA000036 - EMBL: BX927154 - PIR: A47044 - RefSeq: NP_601328.2 - RefSeq: YP_226365.1 - ProteinModelPortal: Q04513 - SMR: Q04513 - GeneID: 1020078 - GeneID: 3342699 - GenomeReviews: BA000036_GR - GenomeReviews: BX927147_GR - KEGG: cgb:cg2334 - KEGG: cgl:NCgl2046 - HOGENOM: HBG714501 - OMA: VDPFVDG - PhylomeDB: Q04513 - ProtClustDB: PRK08639 - BioCyc: CGLU196627:CG2334-MONOMER - BRENDA: 4.3.1.19 - InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR001721 - InterPro: IPR011820 - TIGRFAMs: TIGR02079
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C; SSF53686 PyrdxlP-dep_enz_bsu
EC number: =4.3.1.19
Molecular weight: Translated: 46572; Mature: 46441
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETYVSEKSPGVMASGAELIRAADIQTAQARISSVIAPTPLQYCPRLSEETGAEIYLKR CCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEH EDLQDVRSYKIRGALNSGAQLTQEQRDAGIVAASAGNHAQGVAYVCKSLGVQGRIYVPVQ HHHHHHHHEEEECCCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECC TPKQKRDRIMVHGGEFVSLVVTGNNFDEASAAAHEDAERTGATLIEPFDARNTVIGQGTV CCHHCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCEEEECCHH AAEILSQLTSMGKSADHVMVPVGGGGLLAGVVSYMADMAPRTAIVGIEPAGAASMQAALH HHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH NGGPITLETVDPFVDGAAVKRVGDLNYTIVEKNQGRVHMMSATEGAVCTEMLDLYQNEGI CCCCEEEEECCCHHCCHHHHHHCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCE IAEPAGALSIAGLKEMSFAPGSVVVCIISGGNNDVLRYAEIAERSLVHRGLKHYFLVNFP EECCCCCEEECCCHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECC QKPGQLRHFLEDILGPDDDITLFEYLKRNNRETGTALVGIHLSEASGLDSLLERMEESAI CCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHH DSRRLEPGTPEYEYLT HHCCCCCCCCCCCCCC >Mature Secondary Structure SETYVSEKSPGVMASGAELIRAADIQTAQARISSVIAPTPLQYCPRLSEETGAEIYLKR CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEH EDLQDVRSYKIRGALNSGAQLTQEQRDAGIVAASAGNHAQGVAYVCKSLGVQGRIYVPVQ HHHHHHHHEEEECCCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECC TPKQKRDRIMVHGGEFVSLVVTGNNFDEASAAAHEDAERTGATLIEPFDARNTVIGQGTV CCHHCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCEEEECCHH AAEILSQLTSMGKSADHVMVPVGGGGLLAGVVSYMADMAPRTAIVGIEPAGAASMQAALH HHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH NGGPITLETVDPFVDGAAVKRVGDLNYTIVEKNQGRVHMMSATEGAVCTEMLDLYQNEGI CCCCEEEEECCCHHCCHHHHHHCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCE IAEPAGALSIAGLKEMSFAPGSVVVCIISGGNNDVLRYAEIAERSLVHRGLKHYFLVNFP EECCCCCEEECCCHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECC QKPGQLRHFLEDILGPDDDITLFEYLKRNNRETGTALVGIHLSEASGLDSLLERMEESAI CCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHH DSRRLEPGTPEYEYLT HHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1459955; 12948626