| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is yaeL [C]
Identifier: 62390854
GI number: 62390854
Start: 2098716
End: 2099930
Strand: Reverse
Name: yaeL [C]
Synonym: cg2207
Alternate gene names: 62390854
Gene position: 2099930-2098716 (Counterclockwise)
Preceding gene: 62390855
Following gene: 62390853
Centisome position: 63.97
GC content: 57.45
Gene sequence:
>1215_bases GTGGCAGCCTATCTTCTTGGTGTCGTATTATTTTTCCTCGGCATCGCAGTAACCATCGCGCTTCACGAGTGGGGGCACTT CATCACAGCGCGCATTTTCGGAATGAAAGTGCGGCGTTTCTTCATCGGTTTCGGCCCGACGGTGTTTGCCAAAAGACGCG GCGAAACCGTGTACGGCCTTAAAGCGATTCCGGTCGGCGGTTTTTGTGACATCGCGGGGATGACTGCCCAAGATGAACTT GATCCGGAAGACCTGCCGCGCGCCATGTATCTAAAGCCCTGGTGGCAGCGCATAATTGTGCTTTCCGGCGGCGTGATCAT GAATCTGATCGTCGGCTTTTTGGTGCTTTACGGCGTGGCGGTGAGCTCCGGAATCCCGAATCCGGATGTGGATACCACCG CGACAGTCGACACCGTTCAGTGCGTGCCGGAAACCCAAATTTCCGCAACTGAACTGTCCTCCTGCGTAGGTTCAGGCCCA GCGGGCGACGCCGGCATTGAGCACGGCGATAAGATTTTGGCCGTCAACGGCCAAGAGATGGCAAGCTTCACCGCCATCCG CGATGCGATCCTCGAGCTCCCAGGCGAAACGGCAACGCTGACGATTGAACGGGAGGGAACGCTTTTCGACGTCGACCTCC AGGTTGCCTCTGTCACCCGTCTCGCCTCTGACGGTTCAGAAATTACCGTCGGCGCGGTGGGCATGTCGAGCCTTCCACCG ACCGATGTGTACAAAAAATACGGCCCAATCGAGGGTGTGGGAGCAACTGCACGTTTCACCGGCGACATGATCAGCGCCAC GTGGGATGGCCTCAAAGCCTTCCCGGCGAAAATCCCAGGGGTCGTCGCATCCATCTTCGGTGCAGAACGAGATGTAGAAA GCCCCATGAGTGTGGTGGGCGCGTCACGCATCGGCGGCGAATTTGTCGAACGTTCCATGTGGGACATGTTCATGATGATG CTGGCCAGCCTGAACTTCTTCCTCGCGCTGTTTAACCTCGTGCCGCTGCCACCACTTGATGGCGGACACATTGCCGTGGT GATCTATGAAAAAATCCGCGACTTCTTCCGCAAACTGCGCGGAAAACCAGCGGGCGGCCCAGCGGATTACACCAAACTAA TGCCCGTCACCGTAGCTGTCGCAGCCTTGCTGATGACAGTGGGAGGCCTGGTCATTGTCGCCGATGTGGTCAATCCCATC CGACTCTTTGGCTAA
Upstream 100 bases:
>100_bases GTCGATGATATTTTGGCAACCGAATCTGAGGCACGCGCGCGTGCGAATGCTTTGATCAACCGGTTGGCAACCAACTTGTA AGCTAAGGAGCTTCCGCCTC
Downstream 100 bases:
>100_bases CGATACGGAATTGAACTGCCGGCACCGATGTTAAAAGAGGTGACGGTGATACAATTTTGCCATAACTGACTTAACCCAGA ACGTTGTCCGGAAGCACACA
Product: membrane-embedded Zn-dependent protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MAAYLLGVVLFFLGIAVTIALHEWGHFITARIFGMKVRRFFIGFGPTVFAKRRGETVYGLKAIPVGGFCDIAGMTAQDEL DPEDLPRAMYLKPWWQRIIVLSGGVIMNLIVGFLVLYGVAVSSGIPNPDVDTTATVDTVQCVPETQISATELSSCVGSGP AGDAGIEHGDKILAVNGQEMASFTAIRDAILELPGETATLTIEREGTLFDVDLQVASVTRLASDGSEITVGAVGMSSLPP TDVYKKYGPIEGVGATARFTGDMISATWDGLKAFPAKIPGVVASIFGAERDVESPMSVVGASRIGGEFVERSMWDMFMMM LASLNFFLALFNLVPLPPLDGGHIAVVIYEKIRDFFRKLRGKPAGGPADYTKLMPVTVAVAALLMTVGGLVIVADVVNPI RLFG
Sequences:
>Translated_404_residues MAAYLLGVVLFFLGIAVTIALHEWGHFITARIFGMKVRRFFIGFGPTVFAKRRGETVYGLKAIPVGGFCDIAGMTAQDEL DPEDLPRAMYLKPWWQRIIVLSGGVIMNLIVGFLVLYGVAVSSGIPNPDVDTTATVDTVQCVPETQISATELSSCVGSGP AGDAGIEHGDKILAVNGQEMASFTAIRDAILELPGETATLTIEREGTLFDVDLQVASVTRLASDGSEITVGAVGMSSLPP TDVYKKYGPIEGVGATARFTGDMISATWDGLKAFPAKIPGVVASIFGAERDVESPMSVVGASRIGGEFVERSMWDMFMMM LASLNFFLALFNLVPLPPLDGGHIAVVIYEKIRDFFRKLRGKPAGGPADYTKLMPVTVAVAALLMTVGGLVIVADVVNPI RLFG >Mature_403_residues AAYLLGVVLFFLGIAVTIALHEWGHFITARIFGMKVRRFFIGFGPTVFAKRRGETVYGLKAIPVGGFCDIAGMTAQDELD PEDLPRAMYLKPWWQRIIVLSGGVIMNLIVGFLVLYGVAVSSGIPNPDVDTTATVDTVQCVPETQISATELSSCVGSGPA GDAGIEHGDKILAVNGQEMASFTAIRDAILELPGETATLTIEREGTLFDVDLQVASVTRLASDGSEITVGAVGMSSLPPT DVYKKYGPIEGVGATARFTGDMISATWDGLKAFPAKIPGVVASIFGAERDVESPMSVVGASRIGGEFVERSMWDMFMMML ASLNFFLALFNLVPLPPLDGGHIAVVIYEKIRDFFRKLRGKPAGGPADYTKLMPVTVAVAALLMTVGGLVIVADVVNPIR LFG
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1786373, Length=206, Percent_Identity=27.1844660194175, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR008915 [H]
Pfam domain/function: PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 43045; Mature: 42914
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAYLLGVVLFFLGIAVTIALHEWGHFITARIFGMKVRRFFIGFGPTVFAKRRGETVYGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEE KAIPVGGFCDIAGMTAQDELDPEDLPRAMYLKPWWQRIIVLSGGVIMNLIVGFLVLYGVA EECCCCCCCCCCCCCCCCCCCHHHCCCHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHH VSSGIPNPDVDTTATVDTVQCVPETQISATELSSCVGSGPAGDAGIEHGDKILAVNGQEM HHCCCCCCCCCCCCCCHHEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHH ASFTAIRDAILELPGETATLTIEREGTLFDVDLQVASVTRLASDGSEITVGAVGMSSLPP HHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEHHHHHHHHHCCCCEEEEEECCCCCCCC TDVYKKYGPIEGVGATARFTGDMISATWDGLKAFPAKIPGVVASIFGAERDVESPMSVVG HHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH ASRIGGEFVERSMWDMFMMMLASLNFFLALFNLVPLPPLDGGHIAVVIYEKIRDFFRKLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHC GKPAGGPADYTKLMPVTVAVAALLMTVGGLVIVADVVNPIRLFG CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure AAYLLGVVLFFLGIAVTIALHEWGHFITARIFGMKVRRFFIGFGPTVFAKRRGETVYGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEE KAIPVGGFCDIAGMTAQDELDPEDLPRAMYLKPWWQRIIVLSGGVIMNLIVGFLVLYGVA EECCCCCCCCCCCCCCCCCCCHHHCCCHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHH VSSGIPNPDVDTTATVDTVQCVPETQISATELSSCVGSGPAGDAGIEHGDKILAVNGQEM HHCCCCCCCCCCCCCCHHEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHH ASFTAIRDAILELPGETATLTIEREGTLFDVDLQVASVTRLASDGSEITVGAVGMSSLPP HHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEHHHHHHHHHCCCCEEEEEECCCCCCCC TDVYKKYGPIEGVGATARFTGDMISATWDGLKAFPAKIPGVVASIFGAERDVESPMSVVG HHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH ASRIGGEFVERSMWDMFMMMLASLNFFLALFNLVPLPPLDGGHIAVVIYEKIRDFFRKLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHC GKPAGGPADYTKLMPVTVAVAALLMTVGGLVIVADVVNPIRLFG CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]