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The map label for this gene is soxA' [H]

Identifier: 62390463

GI number: 62390463

Start: 1674730

End: 1675572

Strand: Reverse

Name: soxA' [H]

Synonym: cg1783

Alternate gene names: 62390463

Gene position: 1675572-1674730 (Counterclockwise)

Preceding gene: 62390464

Following gene: 62390461

Centisome position: 51.04

GC content: 55.16

Gene sequence:

>843_bases
ATGAAAATTGCGGTAATCGGCCTTGGATCAACCGGCTCCATGGCACTGTGGCACTTAAGTAACATCCCAGGTGTAGAGGC
CATCGGCTTTGAACAATTCGGCATCTCCCATGGCTACGGCGCATTCACAGGGGAGTCCCGACTGTTTCGCATGGCCTACC
ACGAAGGCAGCACCTACGTTCCGTTGCTCAAACGCGCACGAGCACTATGGTCATCACTGAGCGAGATTTCCGGACGCGAA
CTCTTCCACAACTTCGGTGTCTTAAGCACCGGCAAGGAAGACGAAGCACCCTTCCAACGCCTGGTGGAATCAGTGGAACG
TTATGAGCTGCCACATGAACGACTTACCGCCGCGCAGATGCGCAAGCGTTACCCAGGTCTAGACTTCCGCGATGATGAAG
CTGGAATTGTTGATCTTCAAGGTGGAGCCCTGCGCCCCGAACTAGCAGTGTTCAGTGCAATCGAAACAGCCAAGGCAAAT
GGTGCCCAAGTACGCGATCACCAAAAAATCACCAGCATCGAAGACAACGGCGATCACGTAGTCATCCAAGCAGGCGAAGA
AACCACAATCGTGGACCGCGTTATCGTCACCACCGGCAGCTGGACAAGCGAGCTCGTGCCCTCCATCGCGCCACTGCTTG
AAGTGCGACGCCTAGTGCTCACCTGGTTCCTGCCCAACAATCCAGTGGACTTCCAACCGGAAAACCTGCCATGCTTCATC
CGTGACCGTGATGGCTTCCACGTATTTGGAGCACCATGCGTCGATGGGTACAGCATCAAAATTGCCGGATTGGATGAGTG
GGGCGTTCCATTAAGCCTCGATCCACCGATGTGCCCTCGGTGA

Upstream 100 bases:

>100_bases
CCTGGGCAACCCAAGTGTATGAAAACGCCCTGGAAAAAGGCGTCGGCACCACATTGAACCTGTGGGAATCACCCGCACTG
GCTTGAGAGAAGAAACAACA

Downstream 100 bases:

>100_bases
TGTCCTGATCCCGGTTCCGGGCGGGTCCGGAATTTTCGGGTAGGGGTGATCGCCAGATCACGTCTTGTTCTGGTTGTTCC
ACGAATTGTTGTCATCTCAC

Product: sarcosine oxidase-N-terminal fragment

Products: NA

Alternate protein names: MSOX [H]

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKIAVIGLGSTGSMALWHLSNIPGVEAIGFEQFGISHGYGAFTGESRLFRMAYHEGSTYVPLLKRARALWSSLSEISGRE
LFHNFGVLSTGKEDEAPFQRLVESVERYELPHERLTAAQMRKRYPGLDFRDDEAGIVDLQGGALRPELAVFSAIETAKAN
GAQVRDHQKITSIEDNGDHVVIQAGEETTIVDRVIVTTGSWTSELVPSIAPLLEVRRLVLTWFLPNNPVDFQPENLPCFI
RDRDGFHVFGAPCVDGYSIKIAGLDEWGVPLSLDPPMCPR

Sequences:

>Translated_280_residues
MKIAVIGLGSTGSMALWHLSNIPGVEAIGFEQFGISHGYGAFTGESRLFRMAYHEGSTYVPLLKRARALWSSLSEISGRE
LFHNFGVLSTGKEDEAPFQRLVESVERYELPHERLTAAQMRKRYPGLDFRDDEAGIVDLQGGALRPELAVFSAIETAKAN
GAQVRDHQKITSIEDNGDHVVIQAGEETTIVDRVIVTTGSWTSELVPSIAPLLEVRRLVLTWFLPNNPVDFQPENLPCFI
RDRDGFHVFGAPCVDGYSIKIAGLDEWGVPLSLDPPMCPR
>Mature_280_residues
MKIAVIGLGSTGSMALWHLSNIPGVEAIGFEQFGISHGYGAFTGESRLFRMAYHEGSTYVPLLKRARALWSSLSEISGRE
LFHNFGVLSTGKEDEAPFQRLVESVERYELPHERLTAAQMRKRYPGLDFRDDEAGIVDLQGGALRPELAVFSAIETAKAN
GAQVRDHQKITSIEDNGDHVVIQAGEETTIVDRVIVTTGSWTSELVPSIAPLLEVRRLVLTWFLPNNPVDFQPENLPCFI
RDRDGFHVFGAPCVDGYSIKIAGLDEWGVPLSLDPPMCPR

Specific function: Catalyzes the oxidative demethylation of sarcosine [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MSOX/MTOX family. MSOX subfamily [H]

Homologues:

Organism=Homo sapiens, GI60499001, Length=254, Percent_Identity=25.1968503937008, Blast_Score=91, Evalue=8e-19,
Organism=Escherichia coli, GI1787298, Length=222, Percent_Identity=30.6306306306306, Blast_Score=110, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI25147318, Length=252, Percent_Identity=24.2063492063492, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI115535191, Length=211, Percent_Identity=24.1706161137441, Blast_Score=79, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002204
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.5.3.1 [H]

Molecular weight: Translated: 30964; Mature: 30964

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAVIGLGSTGSMALWHLSNIPGVEAIGFEQFGISHGYGAFTGESRLFRMAYHEGSTYV
CEEEEEEECCCCCEEEEEECCCCCCEEECHHHCCCCCCCCCCCCCCCEEEEEECCCCEEH
PLLKRARALWSSLSEISGRELFHNFGVLSTGKEDEAPFQRLVESVERYELPHERLTAAQM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
RKRYPGLDFRDDEAGIVDLQGGALRPELAVFSAIETAKANGAQVRDHQKITSIEDNGDHV
HHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCEE
VIQAGEETTIVDRVIVTTGSWTSELVPSIAPLLEVRRLVLTWFLPNNPVDFQPENLPCFI
EEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEE
RDRDGFHVFGAPCVDGYSIKIAGLDEWGVPLSLDPPMCPR
ECCCCCEEECCCCCCCEEEEEEECCCCCCCEECCCCCCCC
>Mature Secondary Structure
MKIAVIGLGSTGSMALWHLSNIPGVEAIGFEQFGISHGYGAFTGESRLFRMAYHEGSTYV
CEEEEEEECCCCCEEEEEECCCCCCEEECHHHCCCCCCCCCCCCCCCEEEEEECCCCEEH
PLLKRARALWSSLSEISGRELFHNFGVLSTGKEDEAPFQRLVESVERYELPHERLTAAQM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
RKRYPGLDFRDDEAGIVDLQGGALRPELAVFSAIETAKANGAQVRDHQKITSIEDNGDHV
HHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCEE
VIQAGEETTIVDRVIVTTGSWTSELVPSIAPLLEVRRLVLTWFLPNNPVDFQPENLPCFI
EEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEE
RDRDGFHVFGAPCVDGYSIKIAGLDEWGVPLSLDPPMCPR
ECCCCCEEECCCCCCCEEEEEEECCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]