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The map label for this gene is soxA

Identifier: 62390461

GI number: 62390461

Start: 1672737

End: 1673144

Strand: Reverse

Name: soxA

Synonym: cg1781

Alternate gene names: NA

Gene position: 1673144-1672737 (Counterclockwise)

Preceding gene: 62390463

Following gene: 62390455

Centisome position: 50.97

GC content: 53.43

Gene sequence:

>408_bases
TTGATTCTTCCAGTTCAGGAGGGCATTTCCTATTTTCCCACGCCGTTACACCTGAATCACATCGGTGGATCCAGGTTAAG
CGCACATGTAGAAGATGAAGATCTCCGCCTCGACCGGGACGCAGTCTCTGAATTTGGTCGGAAAACCCACGAACTCTTCC
CCGGGGTCAACCCAGAGCCCAACCGTTTCAGCGTCCACTATGACACCTACACTGCAGACAAATCTCCAATTATCGACGCG
GTTGACAATGTCATTGTGCTCACCGGAGGATCCGGACACGCCTTCAAGCTCTCTCCAGCTTATGGCGAACTCGCAGCACA
ACTAGCGGTCGGAAACACCTCGCCGCTGTACAGCGAAGACTTTCGGATCGCCTCGCATGAACCAATCAAAGAGGCGGTGC
ACGTATAG

Upstream 100 bases:

>100_bases
GGTTGGGGTCATCAAAGGATGCGGACATCGCTGTGGGGTTGTGTAATAATTGCACCTGTGAGGTGCCTTTCTGGCAGGTG
AATCAGGACTCTAAGCAAGC

Downstream 100 bases:

>100_bases
AAAGCTAACCTTTTTAAGTGCGCGGTTTTAGGGTGAGAATCTAACGCTGAGCCAAAAATCCGGGTGCGAACCTCCATCGA
TTCAGATGAAGGTTCGCACC

Product: sarcosine oxidase-fragment

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MILPVQEGISYFPTPLHLNHIGGSRLSAHVEDEDLRLDRDAVSEFGRKTHELFPGVNPEPNRFSVHYDTYTADKSPIIDA
VDNVIVLTGGSGHAFKLSPAYGELAAQLAVGNTSPLYSEDFRIASHEPIKEAVHV

Sequences:

>Translated_135_residues
MILPVQEGISYFPTPLHLNHIGGSRLSAHVEDEDLRLDRDAVSEFGRKTHELFPGVNPEPNRFSVHYDTYTADKSPIIDA
VDNVIVLTGGSGHAFKLSPAYGELAAQLAVGNTSPLYSEDFRIASHEPIKEAVHV
>Mature_135_residues
MILPVQEGISYFPTPLHLNHIGGSRLSAHVEDEDLRLDRDAVSEFGRKTHELFPGVNPEPNRFSVHYDTYTADKSPIIDA
VDNVIVLTGGSGHAFKLSPAYGELAAQLAVGNTSPLYSEDFRIASHEPIKEAVHV

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14791; Mature: 14791

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILPVQEGISYFPTPLHLNHIGGSRLSAHVEDEDLRLDRDAVSEFGRKTHELFPGVNPEP
CCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCEECHHHHHHHHHHHHHHCCCCCCCC
NRFSVHYDTYTADKSPIIDAVDNVIVLTGGSGHAFKLSPAYGELAAQLAVGNTSPLYSED
CEEEEEEECCCCCCCCCHHCCCCEEEEECCCCCEEEECCCHHHHHHHHCCCCCCCCCCCC
FRIASHEPIKEAVHV
CEECCCCCHHHHHCC
>Mature Secondary Structure
MILPVQEGISYFPTPLHLNHIGGSRLSAHVEDEDLRLDRDAVSEFGRKTHELFPGVNPEP
CCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCEECHHHHHHHHHHHHHHCCCCCCCC
NRFSVHYDTYTADKSPIIDAVDNVIVLTGGSGHAFKLSPAYGELAAQLAVGNTSPLYSED
CEEEEEEECCCCCCCCCHHCCCCEEEEECCCCCEEEECCCHHHHHHHHCCCCCCCCCCCC
FRIASHEPIKEAVHV
CEECCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA