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The map label for this gene is sufB [H]

Identifier: 62390447

GI number: 62390447

Start: 1652897

End: 1654342

Strand: Reverse

Name: sufB [H]

Synonym: cg1764

Alternate gene names: 62390447

Gene position: 1654342-1652897 (Counterclockwise)

Preceding gene: 62390448

Following gene: 62390446

Centisome position: 50.4

GC content: 54.98

Gene sequence:

>1446_bases
ATGACTTCGGCAACGACGAACCCAGGGGTTAACGAGCCCTTGACCGATGACCAGATCATTGAATCCATCGGTCCGTACAA
CTATGGTTGGCACGACTCCGACGACGCTGGTGCATCCGCACAGCGTGGTCTCAGCGAGGATGTCGTACGCGACATCTCTG
CGAAGAAGAGCGAGCCAGAATGGATGCTTCAGCAGCGCCTCAAGGCCCTGAGCATTTTTGATAAGAAGCCAGTTCCAACC
TGGGGTGCAGACCTTTCAGGCATTGACTTCGACAACATTAAATACTTCGTCCGCTCCACTGAGAAGCAGGCACAGTCCTG
GGAGGATCTCCCAGAAGACATCAAGAATACCTACGACAAGCTGGGTATTCCTGAGGCCGAGAAGCAGCGCCTCGTTGCAG
GTGTTGCAGCTCAGTACGAGTCTGAGGTTGTCTACCACCAGATCCGCGAGGACCTGGAGGAAAAGGGAGTTATCTTCCTT
GACACCGATACCGCACTGAAAGAGCACCCTGAGATCTTCCAGGAGTACTTCGGCACCGTCATTCCAGCAGGCGACAACAA
GTTCTCCGCACTGAACTCCGCTGTCTGGTCCGGTGGATCTTTCATCTACGTGCCAAAGGGTGTCCACGTGGACATTCCTC
TGCAGGCTTACTTCCGCATCAACACCGAGAACATGGGTCAGTTCGAACGCACCCTGATCATCGTTGATGAGGATGCCTAC
GTTCACTACGTTGAGGGCTGTACCGCACCTATTTACAAGTCCGACTCCCTGCACTCCGCAGTCGTTGAGATCATCGTGAA
GAAGGGTGGACGCTGCCGCTACACCACCATTCAGAACTGGTCCAACAACGTCTACAACCTGGTGACCAAGCGCACCAAGG
TTGAAGAGGGCGGCACCATGGAATGGGTCGATGGCAACATCGGCTCCAAGGTCACCATGAAGTACCCAGCTGTCTGGATG
ACTGGCCCACACGCAAAGGGCGAAGTTCTCTCCGTCGCTTTCGCAGGTGAGGGACAGTTCCAGGACACCGGCGCCAAGAT
GACCCACATGGCTCCTTACACTTCCTCCAACATCGTGTCCAAGTCTGTGGCACGTGGCGGTGGACGTGCGGCTTACCGTG
GTCTGGTTCAGATCAACGCAAACGCTCACCACTCAACCTCCAACGTTGAGTGTGACGCACTGCTGGTCGATGACATCTCC
CGTTCTGACACCTACCCATACAACGACATCCGTAACGATCACGTGTCACTCGGCCACGAGGCAACTGTTTCCCAGGTTTC
TGAAGAGCAGCTGTTCTACCTCATGAGCCGCGGACTTGCGGAAGAAGAAGCAATGGCAATGATCGTTCGTGGCTTCGTTG
AGCCAATCGCTAAGGAACTCCCAATGGAGTACGCCCTTGAGCTCAACCGACTGATCGAACTGCAGATGGAAGGATCGGTG
GGCTAA

Upstream 100 bases:

>100_bases
GCACACGCAACCATTGGCAACAATCGCGGACGGCCACGGCATCTGCACAACAAATATTCCATTGACACCCATCAAACACT
CCTGATGAAAGGAGCGGATC

Downstream 100 bases:

>100_bases
GCCCAATGACTGAAGTAGCAACCGTAAAGGCCGCAACCCCGCACAACACCAAGGGCGACCTCTTCTCCTCATTTAATGTT
GAGGACTTTGAGATCCCACG

Product: component of an uncharacterized iron-regulated ABC-type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MTSATTNPGVNEPLTDDQIIESIGPYNYGWHDSDDAGASAQRGLSEDVVRDISAKKSEPEWMLQQRLKALSIFDKKPVPT
WGADLSGIDFDNIKYFVRSTEKQAQSWEDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEKGVIFL
DTDTALKEHPEIFQEYFGTVIPAGDNKFSALNSAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAY
VHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRTKVEEGGTMEWVDGNIGSKVTMKYPAVWM
TGPHAKGEVLSVAFAGEGQFQDTGAKMTHMAPYTSSNIVSKSVARGGGRAAYRGLVQINANAHHSTSNVECDALLVDDIS
RSDTYPYNDIRNDHVSLGHEATVSQVSEEQLFYLMSRGLAEEEAMAMIVRGFVEPIAKELPMEYALELNRLIELQMEGSV
G

Sequences:

>Translated_481_residues
MTSATTNPGVNEPLTDDQIIESIGPYNYGWHDSDDAGASAQRGLSEDVVRDISAKKSEPEWMLQQRLKALSIFDKKPVPT
WGADLSGIDFDNIKYFVRSTEKQAQSWEDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEKGVIFL
DTDTALKEHPEIFQEYFGTVIPAGDNKFSALNSAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAY
VHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRTKVEEGGTMEWVDGNIGSKVTMKYPAVWM
TGPHAKGEVLSVAFAGEGQFQDTGAKMTHMAPYTSSNIVSKSVARGGGRAAYRGLVQINANAHHSTSNVECDALLVDDIS
RSDTYPYNDIRNDHVSLGHEATVSQVSEEQLFYLMSRGLAEEEAMAMIVRGFVEPIAKELPMEYALELNRLIELQMEGSV
G
>Mature_480_residues
TSATTNPGVNEPLTDDQIIESIGPYNYGWHDSDDAGASAQRGLSEDVVRDISAKKSEPEWMLQQRLKALSIFDKKPVPTW
GADLSGIDFDNIKYFVRSTEKQAQSWEDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEKGVIFLD
TDTALKEHPEIFQEYFGTVIPAGDNKFSALNSAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAYV
HYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRTKVEEGGTMEWVDGNIGSKVTMKYPAVWMT
GPHAKGEVLSVAFAGEGQFQDTGAKMTHMAPYTSSNIVSKSVARGGGRAAYRGLVQINANAHHSTSNVECDALLVDDISR
SDTYPYNDIRNDHVSLGHEATVSQVSEEQLFYLMSRGLAEEEAMAMIVRGFVEPIAKELPMEYALELNRLIELQMEGSVG

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=495, Percent_Identity=39.7979797979798, Blast_Score=369, Evalue=1e-103,
Organism=Escherichia coli, GI1787971, Length=154, Percent_Identity=26.6233766233766, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53493; Mature: 53362

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSATTNPGVNEPLTDDQIIESIGPYNYGWHDSDDAGASAQRGLSEDVVRDISAKKSEPE
CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCHH
WMLQQRLKALSIFDKKPVPTWGADLSGIDFDNIKYFVRSTEKQAQSWEDLPEDIKNTYDK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEKGVIFLDTDTALKEHPEIFQEYFGTV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCHHHHHHHHCEE
IPAGDNKFSALNSAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAY
ECCCCCHHHHHHHHHHCCCCEEEECCCCEEECCEEEEEEECCCCCCCEEEEEEEEECCCE
VHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRTKVEEGGTM
EEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCE
EWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMTHMAPYTSSNIVS
EEECCCCCCEEEEECCEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCHHHH
KSVARGGGRAAYRGLVQINANAHHSTSNVECDALLVDDISRSDTYPYNDIRNDHVSLGHE
HHHHCCCCHHHEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCH
ATVSQVSEEQLFYLMSRGLAEEEAMAMIVRGFVEPIAKELPMEYALELNRLIELQMEGSV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCC
G
C
>Mature Secondary Structure 
TSATTNPGVNEPLTDDQIIESIGPYNYGWHDSDDAGASAQRGLSEDVVRDISAKKSEPE
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCHH
WMLQQRLKALSIFDKKPVPTWGADLSGIDFDNIKYFVRSTEKQAQSWEDLPEDIKNTYDK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEEKGVIFLDTDTALKEHPEIFQEYFGTV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCHHHHHHHHCEE
IPAGDNKFSALNSAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAY
ECCCCCHHHHHHHHHHCCCCEEEECCCCEEECCEEEEEEECCCCCCCEEEEEEEEECCCE
VHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRTKVEEGGTM
EEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCE
EWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMTHMAPYTSSNIVS
EEECCCCCCEEEEECCEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCHHHH
KSVARGGGRAAYRGLVQINANAHHSTSNVECDALLVDDISRSDTYPYNDIRNDHVSLGHE
HHHHCCCCHHHEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCH
ATVSQVSEEQLFYLMSRGLAEEEAMAMIVRGFVEPIAKELPMEYALELNRLIELQMEGSV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]