| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is 62390448
Identifier: 62390448
GI number: 62390448
Start: 1654358
End: 1655044
Strand: Reverse
Name: 62390448
Synonym: cg1765
Alternate gene names: NA
Gene position: 1655044-1654358 (Counterclockwise)
Preceding gene: 62390455
Following gene: 62390447
Centisome position: 50.42
GC content: 50.51
Gene sequence:
>687_bases GTGGGAGATGTTGTAAAAGGCAACGACGCGCACACCGGAGACGGTGATACGCGCCGAAAAATTCTTCTCATCCTGTTGGA ACGTGCACCGGTGATCGCTTCAGATATTGCTGAACAGCTTCAGCTTTCAACTGTGGGAGTGCGCAGGCACCTAGACAACT TGGTTGAAGAAAATCTGGCGGAGGCGGCAAATCCGCGCCAGAACCCATATGAGCCCAAAATGCGCGGTAGGCCAGCAAAA ACTTATCGGCTTACTGATAAAGGTCGCTCAATCTTCGGCCACGAATATGATTCCCTTGCTGCGGCAGCTCTAGCCACTCT TCGAGAGGTCGGCGGAGATGATGCAGTAAGGCAATTTGCTAGAAAGCGGATCGAAACAATTGTTGAGGGTATTACCCCAG CAGATGTCACAGATCAATCAATCGAAGATACAGCCAAATCTTTAGTTGAAGCTTTTAGTCGGCATGGTTATGCAGCAACT GTCGATGCCACTCGAAACGGGTTGCAACTCTGCCAGCATCACTGTCCAATATCTACAGTCGCCACGGAATTTCCGGAACT GTGTGAGGCAGAGCATCAAGCAGTCTCAGAACTTTTGGGGCAGCACACGCAACCATTGGCAACAATCGCGGACGGCCACG GCATCTGCACAACAAATATTCCATTGACACCCATCAAACACTCCTGA
Upstream 100 bases:
>100_bases TTTGCGCTGGTAGGGGGGAAGGGATTGGACACGGGAATGGAATTAGGGAACACTTGTGTTGTCTAAAGGTGAAAGCTAAA TCAAGCAGGAGGTGACACCA
Downstream 100 bases:
>100_bases TGAAAGGAGCGGATCATGACTTCGGCAACGACGAACCCAGGGGTTAACGAGCCCTTGACCGATGACCAGATCATTGAATC CATCGGTCCGTACAACTATG
Product: transcriptional regulator
Products: NA
Alternate protein names: ArsR Family Transcriptional Regulator; Transcriptional Regulatory Protein; Regulatory Protein ArsR; Transcriptional Regulator TrmB; DeoR Family Transcriptional Regulator; Sugar-Specific Transcriptional Regulator TrmB; HTH Domain Family Protein; HTH Domain Family; ArsR Transcriptional Regulator; SufR Family Transcriptional Regulator; Transcriptional Regulator DeoR Family; Arsr Family Transcriptional Regulator; ArsR Family Regulator; Transcriptional Regulator ArsR Family; Iron-Sulfur Cluster Biosynthesis Transcriptional Regulator
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MGDVVKGNDAHTGDGDTRRKILLILLERAPVIASDIAEQLQLSTVGVRRHLDNLVEENLAEAANPRQNPYEPKMRGRPAK TYRLTDKGRSIFGHEYDSLAAAALATLREVGGDDAVRQFARKRIETIVEGITPADVTDQSIEDTAKSLVEAFSRHGYAAT VDATRNGLQLCQHHCPISTVATEFPELCEAEHQAVSELLGQHTQPLATIADGHGICTTNIPLTPIKHS
Sequences:
>Translated_228_residues MGDVVKGNDAHTGDGDTRRKILLILLERAPVIASDIAEQLQLSTVGVRRHLDNLVEENLAEAANPRQNPYEPKMRGRPAK TYRLTDKGRSIFGHEYDSLAAAALATLREVGGDDAVRQFARKRIETIVEGITPADVTDQSIEDTAKSLVEAFSRHGYAAT VDATRNGLQLCQHHCPISTVATEFPELCEAEHQAVSELLGQHTQPLATIADGHGICTTNIPLTPIKHS >Mature_227_residues GDVVKGNDAHTGDGDTRRKILLILLERAPVIASDIAEQLQLSTVGVRRHLDNLVEENLAEAANPRQNPYEPKMRGRPAKT YRLTDKGRSIFGHEYDSLAAAALATLREVGGDDAVRQFARKRIETIVEGITPADVTDQSIEDTAKSLVEAFSRHGYAATV DATRNGLQLCQHHCPISTVATEFPELCEAEHQAVSELLGQHTQPLATIADGHGICTTNIPLTPIKHS
Specific function: Unknown
COG id: COG2345
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24801; Mature: 24670
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDVVKGNDAHTGDGDTRRKILLILLERAPVIASDIAEQLQLSTVGVRRHLDNLVEENLA CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAANPRQNPYEPKMRGRPAKTYRLTDKGRSIFGHEYDSLAAAALATLREVGGDDAVRQFA HHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH RKRIETIVEGITPADVTDQSIEDTAKSLVEAFSRHGYAATVDATRNGLQLCQHHCPISTV HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCHHHH ATEFPELCEAEHQAVSELLGQHTQPLATIADGHGICTTNIPLTPIKHS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCCCCCCCC >Mature Secondary Structure GDVVKGNDAHTGDGDTRRKILLILLERAPVIASDIAEQLQLSTVGVRRHLDNLVEENLA CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAANPRQNPYEPKMRGRPAKTYRLTDKGRSIFGHEYDSLAAAALATLREVGGDDAVRQFA HHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH RKRIETIVEGITPADVTDQSIEDTAKSLVEAFSRHGYAATVDATRNGLQLCQHHCPISTV HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCHHHH ATEFPELCEAEHQAVSELLGQHTQPLATIADGHGICTTNIPLTPIKHS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA