Click here to switch to the map view.

The map label for this gene is sufD [C]

Identifier: 62390446

GI number: 62390446

Start: 1651713

End: 1652891

Strand: Reverse

Name: sufD [C]

Synonym: cg1763

Alternate gene names: 62390446

Gene position: 1652891-1651713 (Counterclockwise)

Preceding gene: 62390447

Following gene: 62390445

Centisome position: 50.35

GC content: 58.35

Gene sequence:

>1179_bases
ATGACTGAAGTAGCAACCGTAAAGGCCGCAACCCCGCACAACACCAAGGGCGACCTCTTCTCCTCATTTAATGTTGAGGA
CTTTGAGATCCCACGCGGACGCGACGAAGAATGGCGTTTCATTTCCCTACGCCGTCTTCGCGGACTCCACAACGGCGAGT
TCGCACCTGCAACCACCTCTGACGTCACCGTCGAGATCCCTGCAGATGCAGAAGGCGCAAGCCACGAAGTTGTCGCAAAG
GACGATGCTCGACTGGGTCGCGCAGGCGCACCAGTAGACCGCGTCGCAGCTCAGGCCTGGACCTCCAAGGAACAGGGCAA
TGTTGTCACCTTTGCCAAAAACTCCCACAACCCAACCCCAGTAACCATCACGGTTACTGGCAAGGGTGAAGGCGTTACCT
CTTTCGGCGCAATCTCCATCGAGGTTGAAGCGGGCGCAGACGCTATCGTCGCACTGCAGTACGTCGGATCCGGCACCCAC
GCTGACAACGTCGAATTCATCGTTGGCGACAACGCACGCCTGACCGTCATCACGGACACCCACTGGAACGCTGACGCAGT
TCACCTGAGCAACCAGCTTGCACAGCTGGGACGCGACGCAACTCTACGCCACACCGTGGCAACCTTCGGTGGAGAAGTAG
TCCGCATCGTCCCACGCGTGCGTTTCACCGCACCAGGTGGCGACGCAGAAATGCTCGGCGTCTACTTCGCAGATGATGGA
CAGTACTTCGAGCAGCGCCTGCTGGTTGACCACGCTGTACCAAACTGTCGCTCCAACGTCTTGTACAAGGGCGCACTTCA
GGGTGACAAGAACTCTGACAAGCCAGATGCCCGTACCTGCTGGGTTGGCGATGTGCTCATCCGCTCAAACGCCCACGGCA
CTGACACCTACGAAGCTAACCGCTCACTCGTCCTCACCGAGGGTGCACGCGCAGACGCTATTCCAAACCTCGAGATTGAA
ACCGGCCAGATCGTTGGCGCAGGACACGCAGCAACCGTCGGTCGTTTCGACGACGAGCACGTGTTCTACCTCCAGGCCCG
TGGTATTCCTGCAGAGGAAGCACGCCGCCTCATCGTCCGCGGTTTCTTCAACGAAGTGATCAACAAGGTCCCAGTTGAAT
CCATCCGCGGGGAATTGGACAACCGAGTCAGCTCGGAACTCGCAGTTCTTGGCATGTAA

Upstream 100 bases:

>100_bases
GCTTCGTTGAGCCAATCGCTAAGGAACTCCCAATGGAGTACGCCCTTGAGCTCAACCGACTGATCGAACTGCAGATGGAA
GGATCGGTGGGCTAAGCCCA

Downstream 100 bases:

>100_bases
TTAAGCCAAAGTAACTAAGCCAAGTGGCTAAGCACAGTTACTTGGCCAAGCTGGGCGGCAGAAAAACCGGCCCAGCTAAT
ACTTCAGTTTAAAATTCGCT

Product: components of an uncharacterized iron-regulated ABC-type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MTEVATVKAATPHNTKGDLFSSFNVEDFEIPRGRDEEWRFISLRRLRGLHNGEFAPATTSDVTVEIPADAEGASHEVVAK
DDARLGRAGAPVDRVAAQAWTSKEQGNVVTFAKNSHNPTPVTITVTGKGEGVTSFGAISIEVEAGADAIVALQYVGSGTH
ADNVEFIVGDNARLTVITDTHWNADAVHLSNQLAQLGRDATLRHTVATFGGEVVRIVPRVRFTAPGGDAEMLGVYFADDG
QYFEQRLLVDHAVPNCRSNVLYKGALQGDKNSDKPDARTCWVGDVLIRSNAHGTDTYEANRSLVLTEGARADAIPNLEIE
TGQIVGAGHAATVGRFDDEHVFYLQARGIPAEEARRLIVRGFFNEVINKVPVESIRGELDNRVSSELAVLGM

Sequences:

>Translated_392_residues
MTEVATVKAATPHNTKGDLFSSFNVEDFEIPRGRDEEWRFISLRRLRGLHNGEFAPATTSDVTVEIPADAEGASHEVVAK
DDARLGRAGAPVDRVAAQAWTSKEQGNVVTFAKNSHNPTPVTITVTGKGEGVTSFGAISIEVEAGADAIVALQYVGSGTH
ADNVEFIVGDNARLTVITDTHWNADAVHLSNQLAQLGRDATLRHTVATFGGEVVRIVPRVRFTAPGGDAEMLGVYFADDG
QYFEQRLLVDHAVPNCRSNVLYKGALQGDKNSDKPDARTCWVGDVLIRSNAHGTDTYEANRSLVLTEGARADAIPNLEIE
TGQIVGAGHAATVGRFDDEHVFYLQARGIPAEEARRLIVRGFFNEVINKVPVESIRGELDNRVSSELAVLGM
>Mature_391_residues
TEVATVKAATPHNTKGDLFSSFNVEDFEIPRGRDEEWRFISLRRLRGLHNGEFAPATTSDVTVEIPADAEGASHEVVAKD
DARLGRAGAPVDRVAAQAWTSKEQGNVVTFAKNSHNPTPVTITVTGKGEGVTSFGAISIEVEAGADAIVALQYVGSGTHA
DNVEFIVGDNARLTVITDTHWNADAVHLSNQLAQLGRDATLRHTVATFGGEVVRIVPRVRFTAPGGDAEMLGVYFADDGQ
YFEQRLLVDHAVPNCRSNVLYKGALQGDKNSDKPDARTCWVGDVLIRSNAHGTDTYEANRSLVLTEGARADAIPNLEIET
GQIVGAGHAATVGRFDDEHVFYLQARGIPAEEARRLIVRGFFNEVINKVPVESIRGELDNRVSSELAVLGM

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=394, Percent_Identity=26.9035532994924, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 42280; Mature: 42149

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEVATVKAATPHNTKGDLFSSFNVEDFEIPRGRDEEWRFISLRRLRGLHNGEFAPATTS
CCCEEEEEECCCCCCCCCCEECCCCCEEECCCCCCCCCEEEEEHHHCCCCCCCCCCCCCC
DVTVEIPADAEGASHEVVAKDDARLGRAGAPVDRVAAQAWTSKEQGNVVTFAKNSHNPTP
CEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCC
VTITVTGKGEGVTSFGAISIEVEAGADAIVALQYVGSGTHADNVEFIVGDNARLTVITDT
EEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEECCCCEEEEEECC
HWNADAVHLSNQLAQLGRDATLRHTVATFGGEVVRIVPRVRFTAPGGDAEMLGVYFADDG
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEEEEECCCCCCEEEEEEEECCC
QYFEQRLLVDHAVPNCRSNVLYKGALQGDKNSDKPDARTCWVGDVLIRSNAHGTDTYEAN
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCC
RSLVLTEGARADAIPNLEIETGQIVGAGHAATVGRFDDEHVFYLQARGIPAEEARRLIVR
CEEEEECCCCCCCCCCCEEECCEEEECCCCEEECCCCCCEEEEEEECCCCHHHHHHHHHH
GFFNEVINKVPVESIRGELDNRVSSELAVLGM
HHHHHHHHHCCHHHHHHHHHHHHHCCEEEECC
>Mature Secondary Structure 
TEVATVKAATPHNTKGDLFSSFNVEDFEIPRGRDEEWRFISLRRLRGLHNGEFAPATTS
CCEEEEEECCCCCCCCCCEECCCCCEEECCCCCCCCCEEEEEHHHCCCCCCCCCCCCCC
DVTVEIPADAEGASHEVVAKDDARLGRAGAPVDRVAAQAWTSKEQGNVVTFAKNSHNPTP
CEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCC
VTITVTGKGEGVTSFGAISIEVEAGADAIVALQYVGSGTHADNVEFIVGDNARLTVITDT
EEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEECCCCEEEEEECC
HWNADAVHLSNQLAQLGRDATLRHTVATFGGEVVRIVPRVRFTAPGGDAEMLGVYFADDG
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEEEEECCCCCCEEEEEEEECCC
QYFEQRLLVDHAVPNCRSNVLYKGALQGDKNSDKPDARTCWVGDVLIRSNAHGTDTYEAN
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCC
RSLVLTEGARADAIPNLEIETGQIVGAGHAATVGRFDDEHVFYLQARGIPAEEARRLIVR
CEEEEECCCCCCCCCCCEEECCEEEECCCCEEECCCCCCEEEEEEECCCCHHHHHHHHHH
GFFNEVINKVPVESIRGELDNRVSSELAVLGM
HHHHHHHHHCCHHHHHHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]