| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is zupT [H]
Identifier: 62390318
GI number: 62390318
Start: 1513641
End: 1514447
Strand: Direct
Name: zupT [H]
Synonym: cg1623
Alternate gene names: 62390318
Gene position: 1513641-1514447 (Clockwise)
Preceding gene: 62390317
Following gene: 62390323
Centisome position: 46.11
GC content: 57.99
Gene sequence:
>807_bases ATGGATACCTCGACTGTGTTGTTCGCATTTGGACTCACCCTATTTGCCGGTCTTGCCACCGGCATCGGCGGTCTCATCGC CGTAGCGCGCAAAACCGTCACCGAAGGATTCCTCGCAGGATCACTCGGCTTCTCTGTCGGCGTGATGCTGTACGTATCCT TTGTGGAAATTCTACCCGGCGCCTTTGATGAATTAACCAGTGTTTGGGGAGAAAAAGGCGGAAGTTGGGCCGCTGTTATC GGCTTCTTCGGTGGCATCGCGCTGATCGCCATCATCGACCGCTTAGTCCCCACGGCGATTAACCCCCACGAGCCCTCCAC CGTGGGAGGCGCCGTTGAAGGATTCGAGCGCCGCAACCGCATGATGAAAATGGGTGTGCTCACTGCGCTGGCCATCGCGA TCCACAACTTTCCCGAAGGTTTCGCTACATTCTTGGCCGGATTGTCCGATCCAATGATCGCGATCCCTGTGGCCGTGGCA ATTGCCATTCACAATATTCCAGAGGGCATTGCGGTGGCGGTGCCACTGAGGGAAGCTACAGGGTCACGTCGAAAAGCATT AGGTTGGGCGACCCTCTCCGGCCTTGCTGAGCCCGCCGGCGCCCTCATCGGATTCCTGCTGCTCATGCCCTTTATCGGAC CAGAAGCACTCGGCCTGTGCTTCGCCGCAGTTGCCGGCGTGATGGTGTTCATCAGCGTCGATGAACTACTGCCCACTGCC ATCTCCAGCGGCAAACACCACACCGCCATCTACGGACTCATCGCTGGCATGGCAGTCATGGCGATCAGCCTGCTGCTGTT TATCTAG
Upstream 100 bases:
>100_bases AGTTATTGGATCACGGGGGTATTTATCAGCGTCTGTGGACTGCGTGGAGTGTCGGAAGATAGTTGACTGTTCAATGCGTT GAACATTAGTATTCATCCCT
Downstream 100 bases:
>100_bases CGTTCAGCCGCAACAAGCATCCGGTCAATGTTGGTCAACACCTCATCAACATAGGCCGGATTAACGCCGCGCTCCCGCCG CGCCTTCAACAGCTCCTCCT
Product: zinc transporter ZupT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MDTSTVLFAFGLTLFAGLATGIGGLIAVARKTVTEGFLAGSLGFSVGVMLYVSFVEILPGAFDELTSVWGEKGGSWAAVI GFFGGIALIAIIDRLVPTAINPHEPSTVGGAVEGFERRNRMMKMGVLTALAIAIHNFPEGFATFLAGLSDPMIAIPVAVA IAIHNIPEGIAVAVPLREATGSRRKALGWATLSGLAEPAGALIGFLLLMPFIGPEALGLCFAAVAGVMVFISVDELLPTA ISSGKHHTAIYGLIAGMAVMAISLLLFI
Sequences:
>Translated_268_residues MDTSTVLFAFGLTLFAGLATGIGGLIAVARKTVTEGFLAGSLGFSVGVMLYVSFVEILPGAFDELTSVWGEKGGSWAAVI GFFGGIALIAIIDRLVPTAINPHEPSTVGGAVEGFERRNRMMKMGVLTALAIAIHNFPEGFATFLAGLSDPMIAIPVAVA IAIHNIPEGIAVAVPLREATGSRRKALGWATLSGLAEPAGALIGFLLLMPFIGPEALGLCFAAVAGVMVFISVDELLPTA ISSGKHHTAIYGLIAGMAVMAISLLLFI >Mature_268_residues MDTSTVLFAFGLTLFAGLATGIGGLIAVARKTVTEGFLAGSLGFSVGVMLYVSFVEILPGAFDELTSVWGEKGGSWAAVI GFFGGIALIAIIDRLVPTAINPHEPSTVGGAVEGFERRNRMMKMGVLTALAIAIHNFPEGFATFLAGLSDPMIAIPVAVA IAIHNIPEGIAVAVPLREATGSRRKALGWATLSGLAEPAGALIGFLLLMPFIGPEALGLCFAAVAGVMVFISVDELLPTA ISSGKHHTAIYGLIAGMAVMAISLLLFI
Specific function: Mediates zinc uptake. May also transport other divalent cations [H]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily [H]
Homologues:
Organism=Homo sapiens, GI229577418, Length=145, Percent_Identity=34.4827586206897, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI229577422, Length=145, Percent_Identity=34.4827586206897, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1789419, Length=258, Percent_Identity=39.5348837209302, Blast_Score=152, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17507805, Length=295, Percent_Identity=27.7966101694915, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24652846, Length=176, Percent_Identity=31.8181818181818, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 27595; Mature: 27595
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTSTVLFAFGLTLFAGLATGIGGLIAVARKTVTEGFLAGSLGFSVGVMLYVSFVEILPG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AFDELTSVWGEKGGSWAAVIGFFGGIALIAIIDRLVPTAINPHEPSTVGGAVEGFERRNR CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH MMKMGVLTALAIAIHNFPEGFATFLAGLSDPMIAIPVAVAIAIHNIPEGIAVAVPLREAT HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHC GSRRKALGWATLSGLAEPAGALIGFLLLMPFIGPEALGLCFAAVAGVMVFISVDELLPTA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ISSGKHHTAIYGLIAGMAVMAISLLLFI HCCCCCHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MDTSTVLFAFGLTLFAGLATGIGGLIAVARKTVTEGFLAGSLGFSVGVMLYVSFVEILPG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AFDELTSVWGEKGGSWAAVIGFFGGIALIAIIDRLVPTAINPHEPSTVGGAVEGFERRNR CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH MMKMGVLTALAIAIHNFPEGFATFLAGLSDPMIAIPVAVAIAIHNIPEGIAVAVPLREAT HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHC GSRRKALGWATLSGLAEPAGALIGFLLLMPFIGPEALGLCFAAVAGVMVFISVDELLPTA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ISSGKHHTAIYGLIAGMAVMAISLLLFI HCCCCCHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]