| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is secA2 [H]
Identifier: 62390323
GI number: 62390323
Start: 1518637
End: 1520928
Strand: Direct
Name: secA2 [H]
Synonym: cg1629
Alternate gene names: 62390323
Gene position: 1518637-1520928 (Clockwise)
Preceding gene: 62390318
Following gene: 62390324
Centisome position: 46.26
GC content: 57.94
Gene sequence:
>2292_bases GTGGCCGGTTTTGATTGGTTTTGGAAGGCCCTTGGCGGCAAATCGGGCAGAAACCAAAAACGTAGCGTGGCAATTGTCAA TCAGGTAGAAAACCATGCAGCGGAATTAGACGCGCTGGATGATGTTGCATTGGCGCAGCGTGCCAAGGATCTAGCCAGTG GTGGACGCATTGACAATCATGCGGAATTCCTCGCCATTTTGGGTGTGGCATCGCAGCGGACATTGGGGCTGAAGCCGTAT CCGGTGCAATCACAGGCGGTGTTGCGTCTCATTGAAGGCGATGTGGTGCACATGGCTACCGGTGAGGGCAAGACTTTGGT GGGCGCGATGGCGGCCACCGGTCTGGGGTTGATGGGCAAGCGAGTCCATTCGATTACCGTCAATGATTATTTGGCGGTGC GCGATGCCGAATGGATGCGGCCATTGGTCGAATTTTTCGGTCTGAGCGTGGCGAGCATCAGCGAGAAGATGGATGCAGGG GAGCGTCGACAAGCATATAAAGCCGCAATTGTCTACGGACCTGTCAATGAAATCGGCTTTGACGTGCTGCGTGATCAGCT AATTACCCGGCGCGAAGACGCCGTGCAGCATGGCGCCGACGTCGCGATTATCGATGAGGCCGATTCCGTGCTTGTCGACG AGGCCCTGGTGCCACTCGTCCTCGCCGGCAACCAGCCCGGCCATGCGCCGCGCGGCAAAATCACCGATGTGGTGCGCTCG TTGAAAGAAAACGACGATTACACCATCGACGATGATCGTCGCAACGTCTTCCTCACCGACAAGGGTGCCGCCAAATTAGA GCAGCAGCTGGGCATCAGCAGCCTCTACGACGATGAGCACGTCGGCTCGACGCTCGTGCAGGTCAACCTCGCCCTCCACG CGCAGGCACTGCTCATCCGCGACATCCACTACATCGTCCGCGACAGCAAGGTCTTGCTTATCGACGCCTCCCGCGGCCGT GTCGCCGACCTGCAGCGCTGGCCCGACGGCCTGCAAGCAGCAGTGGAGGCCAAGGAAGGTCTCGCGGTTTCTGAAGGCGG CAAGATCCTTGACACCATCACACTTCAGGCGTTGATTGGTCGCTACCCAATGGCATGCGGCATGACAGGTACCGCCGTGG AGGCAACCGATCAGCTACGCACCTTCTATGACTTGCATGTTTCTGTCATTGAGCGCAATCATCCGCTGAAGCGCTTTGAT GAAGCTGACCGTATCTACGCCACCATGGCGGAGAAAAACCGCGCCATCATCGATGAAATCGCACTCCTTCACAGCACGGG GCAGCCAGTCCTGGTGGGTACCCACGATGTGGCAGAGTCGGAAGAACTCGCCACTGCACTGCGTGAACTCAACATCGAAG TAAGCGTTCTCAACGCCAAGAATGATGCCGAAGAAGCCCAGATCATCGCAGAGGCTGGCGATATTGGACGAGTGACCGTT TCCACTCAGATGGCCGGCCGCGGTACCGATATTCGCCTCGGTGGCGCCGATGAAGCCGACTACGATGAAGTGGTGAAACT CGGTGGACTCGCCGTTATCGGCACCGCCCGCCACCGTTCTCAGCGCCTGGACAACCAGCTGCGCGGACGTGCGGGACGAC AAGGAGATCCAGGCCTGAGCCTTTTCTTTGTCTCCCTCGATGATGATGTGGTGGTCTCAGGCGGGTCAGGGGAGAGCGTG AGCGCGCAACCCGATGCCACCGGGCTGATTGACTCAGATCGCATCCGCGATTGGGTCGGACACTGCCAGCGCGTCACCGA AGGACAGCTGCTGGAAATCCACTCCCAGAGCTGGAATTACAACAAGCTCCTTGCCGATCAACGCGTGATCATTGACGAGC GCCGCGAACGCCTCCTCGACACCGCCTTAGCGTGGGAGGAACTGGCACAGCATGCACCAGCGCGGGCTGCAGAGCTTGAA GACCTTGATCAGTCCGTGAGGGAACAGGCAGCACGAGACATCATGCTGTACCACCTCGATTACAACTGGTCAGAGCACCT CGCGTTGATGGATGATGTCCGCGAATCCATTCACCTGCGCGCCATCGCCAGGGAAACCCCCCTTGATGAATACCACCGCA TCGCTGTGCGTGAATTCAAGGATTTGGCACAACGCGCTGTCGATGATGCGGTGTCCACGTTCAAGTCTGTGACCATCGAT CACGAGGGTGCCCATTTGGATGATGAGGGCTTGGCGCGTCCATCAGCAACGTGGACCTACATGGTCTCTGACAACCCACT TGCGGGTAGTGGTAACTCAGTGATCAGTGGCATAGGAAATATCTTTAGATAA
Upstream 100 bases:
>100_bases TCTTACCCACCAGTGCAATGTAGGTCACGTCGTATCACGTCTGAGGGTGATTGAGTAGGGTTAAACAGATGAATTCATTT AGCTCACCGGAGGTATAACC
Downstream 100 bases:
>100_bases CCTGAGAACTATGAAATTCCAGCTCACGGCGTTTTTTCAGGAAATTCTAGGATCTTACGGAGGGTAACTCCGCACTCAAC ATCTAGACAAAGGCTATGAT
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 763; Mature: 762
Protein sequence:
>763_residues MAGFDWFWKALGGKSGRNQKRSVAIVNQVENHAAELDALDDVALAQRAKDLASGGRIDNHAEFLAILGVASQRTLGLKPY PVQSQAVLRLIEGDVVHMATGEGKTLVGAMAATGLGLMGKRVHSITVNDYLAVRDAEWMRPLVEFFGLSVASISEKMDAG ERRQAYKAAIVYGPVNEIGFDVLRDQLITRREDAVQHGADVAIIDEADSVLVDEALVPLVLAGNQPGHAPRGKITDVVRS LKENDDYTIDDDRRNVFLTDKGAAKLEQQLGISSLYDDEHVGSTLVQVNLALHAQALLIRDIHYIVRDSKVLLIDASRGR VADLQRWPDGLQAAVEAKEGLAVSEGGKILDTITLQALIGRYPMACGMTGTAVEATDQLRTFYDLHVSVIERNHPLKRFD EADRIYATMAEKNRAIIDEIALLHSTGQPVLVGTHDVAESEELATALRELNIEVSVLNAKNDAEEAQIIAEAGDIGRVTV STQMAGRGTDIRLGGADEADYDEVVKLGGLAVIGTARHRSQRLDNQLRGRAGRQGDPGLSLFFVSLDDDVVVSGGSGESV SAQPDATGLIDSDRIRDWVGHCQRVTEGQLLEIHSQSWNYNKLLADQRVIIDERRERLLDTALAWEELAQHAPARAAELE DLDQSVREQAARDIMLYHLDYNWSEHLALMDDVRESIHLRAIARETPLDEYHRIAVREFKDLAQRAVDDAVSTFKSVTID HEGAHLDDEGLARPSATWTYMVSDNPLAGSGNSVISGIGNIFR
Sequences:
>Translated_763_residues MAGFDWFWKALGGKSGRNQKRSVAIVNQVENHAAELDALDDVALAQRAKDLASGGRIDNHAEFLAILGVASQRTLGLKPY PVQSQAVLRLIEGDVVHMATGEGKTLVGAMAATGLGLMGKRVHSITVNDYLAVRDAEWMRPLVEFFGLSVASISEKMDAG ERRQAYKAAIVYGPVNEIGFDVLRDQLITRREDAVQHGADVAIIDEADSVLVDEALVPLVLAGNQPGHAPRGKITDVVRS LKENDDYTIDDDRRNVFLTDKGAAKLEQQLGISSLYDDEHVGSTLVQVNLALHAQALLIRDIHYIVRDSKVLLIDASRGR VADLQRWPDGLQAAVEAKEGLAVSEGGKILDTITLQALIGRYPMACGMTGTAVEATDQLRTFYDLHVSVIERNHPLKRFD EADRIYATMAEKNRAIIDEIALLHSTGQPVLVGTHDVAESEELATALRELNIEVSVLNAKNDAEEAQIIAEAGDIGRVTV STQMAGRGTDIRLGGADEADYDEVVKLGGLAVIGTARHRSQRLDNQLRGRAGRQGDPGLSLFFVSLDDDVVVSGGSGESV SAQPDATGLIDSDRIRDWVGHCQRVTEGQLLEIHSQSWNYNKLLADQRVIIDERRERLLDTALAWEELAQHAPARAAELE DLDQSVREQAARDIMLYHLDYNWSEHLALMDDVRESIHLRAIARETPLDEYHRIAVREFKDLAQRAVDDAVSTFKSVTID HEGAHLDDEGLARPSATWTYMVSDNPLAGSGNSVISGIGNIFR >Mature_762_residues AGFDWFWKALGGKSGRNQKRSVAIVNQVENHAAELDALDDVALAQRAKDLASGGRIDNHAEFLAILGVASQRTLGLKPYP VQSQAVLRLIEGDVVHMATGEGKTLVGAMAATGLGLMGKRVHSITVNDYLAVRDAEWMRPLVEFFGLSVASISEKMDAGE RRQAYKAAIVYGPVNEIGFDVLRDQLITRREDAVQHGADVAIIDEADSVLVDEALVPLVLAGNQPGHAPRGKITDVVRSL KENDDYTIDDDRRNVFLTDKGAAKLEQQLGISSLYDDEHVGSTLVQVNLALHAQALLIRDIHYIVRDSKVLLIDASRGRV ADLQRWPDGLQAAVEAKEGLAVSEGGKILDTITLQALIGRYPMACGMTGTAVEATDQLRTFYDLHVSVIERNHPLKRFDE ADRIYATMAEKNRAIIDEIALLHSTGQPVLVGTHDVAESEELATALRELNIEVSVLNAKNDAEEAQIIAEAGDIGRVTVS TQMAGRGTDIRLGGADEADYDEVVKLGGLAVIGTARHRSQRLDNQLRGRAGRQGDPGLSLFFVSLDDDVVVSGGSGESVS AQPDATGLIDSDRIRDWVGHCQRVTEGQLLEIHSQSWNYNKLLADQRVIIDERRERLLDTALAWEELAQHAPARAAELED LDQSVREQAARDIMLYHLDYNWSEHLALMDDVRESIHLRAIARETPLDEYHRIAVREFKDLAQRAVDDAVSTFKSVTIDH EGAHLDDEGLARPSATWTYMVSDNPLAGSGNSVISGIGNIFR
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular mo
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=665, Percent_Identity=37.7443609022556, Blast_Score=381, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 83502; Mature: 83371
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGFDWFWKALGGKSGRNQKRSVAIVNQVENHAAELDALDDVALAQRAKDLASGGRIDNH CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH AEFLAILGVASQRTLGLKPYPVQSQAVLRLIEGDVVHMATGEGKTLVGAMAATGLGLMGK HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCHHHCC RVHSITVNDYLAVRDAEWMRPLVEFFGLSVASISEKMDAGERRQAYKAAIVYGPVNEIGF CEEEEEECCEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHEEEEEECCHHHHHH DVLRDQLITRREDAVQHGADVAIIDEADSVLVDEALVPLVLAGNQPGHAPRGKITDVVRS HHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHH LKENDDYTIDDDRRNVFLTDKGAAKLEQQLGISSLYDDEHVGSTLVQVNLALHAQALLIR HHCCCCCEECCCCCEEEEECCCHHHHHHHCCCHHHCCCHHHCCEEEEEEHHHHHHHHHHH DIHYIVRDSKVLLIDASRGRVADLQRWPDGLQAAVEAKEGLAVSEGGKILDTITLQALIG HHHHHHCCCEEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHC RYPMACGMTGTAVEATDQLRTFYDLHVSVIERNHPLKRFDEADRIYATMAEKNRAIIDEI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCHHHHHHH ALLHSTGQPVLVGTHDVAESEELATALRELNIEVSVLNAKNDAEEAQIIAEAGDIGRVTV HHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCEEEE STQMAGRGTDIRLGGADEADYDEVVKLGGLAVIGTARHRSQRLDNQLRGRAGRQGDPGLS EEEECCCCCEEEECCCCCCCHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCE LFFVSLDDDVVVSGGSGESVSAQPDATGLIDSDRIRDWVGHCQRVTEGQLLEIHSQSWNY EEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC NKLLADQRVIIDERRERLLDTALAWEELAQHAPARAAELEDLDQSVREQAARDIMLYHLD HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCEEEEEEC YNWSEHLALMDDVRESIHLRAIARETPLDEYHRIAVREFKDLAQRAVDDAVSTFKSVTID CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC HEGAHLDDEGLARPSATWTYMVSDNPLAGSGNSVISGIGNIFR CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure AGFDWFWKALGGKSGRNQKRSVAIVNQVENHAAELDALDDVALAQRAKDLASGGRIDNH CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH AEFLAILGVASQRTLGLKPYPVQSQAVLRLIEGDVVHMATGEGKTLVGAMAATGLGLMGK HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCHHHCC RVHSITVNDYLAVRDAEWMRPLVEFFGLSVASISEKMDAGERRQAYKAAIVYGPVNEIGF CEEEEEECCEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHEEEEEECCHHHHHH DVLRDQLITRREDAVQHGADVAIIDEADSVLVDEALVPLVLAGNQPGHAPRGKITDVVRS HHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHH LKENDDYTIDDDRRNVFLTDKGAAKLEQQLGISSLYDDEHVGSTLVQVNLALHAQALLIR HHCCCCCEECCCCCEEEEECCCHHHHHHHCCCHHHCCCHHHCCEEEEEEHHHHHHHHHHH DIHYIVRDSKVLLIDASRGRVADLQRWPDGLQAAVEAKEGLAVSEGGKILDTITLQALIG HHHHHHCCCEEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHC RYPMACGMTGTAVEATDQLRTFYDLHVSVIERNHPLKRFDEADRIYATMAEKNRAIIDEI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCHHHHHHH ALLHSTGQPVLVGTHDVAESEELATALRELNIEVSVLNAKNDAEEAQIIAEAGDIGRVTV HHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCEEEE STQMAGRGTDIRLGGADEADYDEVVKLGGLAVIGTARHRSQRLDNQLRGRAGRQGDPGLS EEEECCCCCEEEECCCCCCCHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCE LFFVSLDDDVVVSGGSGESVSAQPDATGLIDSDRIRDWVGHCQRVTEGQLLEIHSQSWNY EEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC NKLLADQRVIIDERRERLLDTALAWEELAQHAPARAAELEDLDQSVREQAARDIMLYHLD HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCEEEEEEC YNWSEHLALMDDVRESIHLRAIARETPLDEYHRIAVREFKDLAQRAVDDAVSTFKSVTID CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC HEGAHLDDEGLARPSATWTYMVSDNPLAGSGNSVISGIGNIFR CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA