| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is thtR
Identifier: 62389590
GI number: 62389590
Start: 722017
End: 722922
Strand: Reverse
Name: thtR
Synonym: cg0803
Alternate gene names: 62389590
Gene position: 722922-722017 (Counterclockwise)
Preceding gene: 62389592
Following gene: 62389589
Centisome position: 22.02
GC content: 58.5
Gene sequence:
>906_bases ATGGCAGCACCGTTCGACCCATTCCCAGCTTTTGAGGAATACGCACACCCTGAAAGGATCGTGTCTGCATCCTGGCTTTC CGCCCGCCTCGGCTCCCCTGGTCTGAAGGTTGTGGAGTCCAATGAAGATTCCCTTCTTTACGATATCGGACACCTCCCCG GCGCTGTGCGCATTGACTGGGCAAAGGACCTCAACGATCCCCTCACCCGCGATTTCATTGACGGTGAAGCTTTCGCTGAG CTGATGAACCGCAAGGGCATCGCTCGCGATGACACCGTTGTTGTCTACGGTGACAAGTCCAACTGGTGGGCTGCGTTCAC CCTGTGGGTCTTCGAACTGTTCGGCCACTCCGATGTCCGCCTGCTCAACGGCGGCCGCGACGCGTGGATGGCTGAAGAGC GCGACACCTCCTACGTGGTTCCGGAGTACCCCTCCGCCAACTACCCCGTCGTGGAGCGTGTCGACGAAAACCAGCGCGCG TTCGTGGCTGAGGTGCTCGGTTCGCTCACGCAATCCGGTGGCATGACGCTTGTCGACGTCAGGACCCCTTCGGAGTTCTC CGGATTGGATGAGCACGGCAACCCAACCTCAAACACCGGCGTGCTTCGTGGTGGACACATCCCAGGCGCGATCAACCTGG ATTGGTCGGACGCTGTTCTTCCCAACGGAAACTTCCGCACCCGTGCAGAGTTGGACAAGCTCTACGCCGATCTCAACCCA GCTGACGATACCGTTGTCTACTGCCAGGTTGGCGACCGCGCGGCCCACACCTGGTTCGTGCTGAAGTATCTGCTCGGTTT CAACAACGTCCGAAACTATGACGGATCGTGGGCAGAATGGGGCAATATGGTTCGCATGCCGATCGAAACTGGCGAAAACA CCAAAAATAACGTTTCGGTGTCATAG
Upstream 100 bases:
>100_bases CTAGTAATTAAGGACACAAACACCTTTAACCAATATGCTGGGATACAGTATTTAATTTTCACCCATTTATGCACTCGTTT ATGGAAGGCAGCGACCCCAC
Downstream 100 bases:
>100_bases AATAGGCGTATCCCCTTTTTGCCTGAACATAAGCCATATTTCCTGCCTAAAACAGAAGAATTCCCCCAGAATATGAGTAA GTCCTCATATCTGGTTGAGT
Product: thiosulfate sulfurtransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MAAPFDPFPAFEEYAHPERIVSASWLSARLGSPGLKVVESNEDSLLYDIGHLPGAVRIDWAKDLNDPLTRDFIDGEAFAE LMNRKGIARDDTVVVYGDKSNWWAAFTLWVFELFGHSDVRLLNGGRDAWMAEERDTSYVVPEYPSANYPVVERVDENQRA FVAEVLGSLTQSGGMTLVDVRTPSEFSGLDEHGNPTSNTGVLRGGHIPGAINLDWSDAVLPNGNFRTRAELDKLYADLNP ADDTVVYCQVGDRAAHTWFVLKYLLGFNNVRNYDGSWAEWGNMVRMPIETGENTKNNVSVS
Sequences:
>Translated_301_residues MAAPFDPFPAFEEYAHPERIVSASWLSARLGSPGLKVVESNEDSLLYDIGHLPGAVRIDWAKDLNDPLTRDFIDGEAFAE LMNRKGIARDDTVVVYGDKSNWWAAFTLWVFELFGHSDVRLLNGGRDAWMAEERDTSYVVPEYPSANYPVVERVDENQRA FVAEVLGSLTQSGGMTLVDVRTPSEFSGLDEHGNPTSNTGVLRGGHIPGAINLDWSDAVLPNGNFRTRAELDKLYADLNP ADDTVVYCQVGDRAAHTWFVLKYLLGFNNVRNYDGSWAEWGNMVRMPIETGENTKNNVSVS >Mature_300_residues AAPFDPFPAFEEYAHPERIVSASWLSARLGSPGLKVVESNEDSLLYDIGHLPGAVRIDWAKDLNDPLTRDFIDGEAFAEL MNRKGIARDDTVVVYGDKSNWWAAFTLWVFELFGHSDVRLLNGGRDAWMAEERDTSYVVPEYPSANYPVVERVDENQRAF VAEVLGSLTQSGGMTLVDVRTPSEFSGLDEHGNPTSNTGVLRGGHIPGAINLDWSDAVLPNGNFRTRAELDKLYADLNPA DDTVVYCQVGDRAAHTWFVLKYLLGFNNVRNYDGSWAEWGNMVRMPIETGENTKNNVSVS
Specific function: May Be A Sulfotransferase Involved In The Formation Of Thiosulfate. The Rhodanese Activity Of Ssea Is Weak, Its Participation In Detoxification Of Cyanide May Be Small. May Be Involved In The Enhancement Of Serine-Sensitivity. [C]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains
Homologues:
Organism=Homo sapiens, GI17402865, Length=290, Percent_Identity=31.0344827586207, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI194473668, Length=274, Percent_Identity=28.1021897810219, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI61835204, Length=279, Percent_Identity=27.9569892473118, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI194473681, Length=279, Percent_Identity=27.9569892473118, Blast_Score=87, Evalue=1e-17, Organism=Escherichia coli, GI87082121, Length=282, Percent_Identity=28.0141843971631, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87081967, Length=300, Percent_Identity=28, Blast_Score=90, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17561888, Length=277, Percent_Identity=25.9927797833935, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI115534702, Length=226, Percent_Identity=29.2035398230088, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71997283, Length=235, Percent_Identity=26.8085106382979, Blast_Score=70, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6324825, Length=240, Percent_Identity=27.5, Blast_Score=72, Evalue=7e-14,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): THTR_CORGL (P71121)
Other databases:
- EMBL: BA000036 - EMBL: BX927150 - EMBL: U35023 - RefSeq: NP_599933.1 - RefSeq: YP_224992.1 - ProteinModelPortal: P71121 - SMR: P71121 - GeneID: 1018700 - GeneID: 3342624 - GenomeReviews: BA000036_GR - GenomeReviews: BX927147_GR - KEGG: cgb:cg0803 - KEGG: cgl:NCgl0671 - HOGENOM: HBG709927 - OMA: EERDTSY - PhylomeDB: P71121 - ProtClustDB: CLSK811394 - BioCyc: CGLU196627:CG0803-MONOMER - BRENDA: 2.8.1.1 - InterPro: IPR001763 - InterPro: IPR001307 - Gene3D: G3DSA:3.40.250.10 - SMART: SM00450
Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like
EC number: =2.8.1.1
Molecular weight: Translated: 33494; Mature: 33363
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS00380 RHODANESE_1; PS00683 RHODANESE_2; PS50206 RHODANESE_3
Important sites: ACT_SITE 248-248 BINDING 253-253
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPFDPFPAFEEYAHPERIVSASWLSARLGSPGLKVVESNEDSLLYDIGHLPGAVRIDW CCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCEEEEEH AKDLNDPLTRDFIDGEAFAELMNRKGIARDDTVVVYGDKSNWWAAFTLWVFELFGHSDVR HHCCCCCHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEE LLNGGRDAWMAEERDTSYVVPEYPSANYPVVERVDENQRAFVAEVLGSLTQSGGMTLVDV EEECCCCCCEECCCCCCEECCCCCCCCCCHHEECCCCHHHHHHHHHHHHHHCCCCEEEEE RTPSEFSGLDEHGNPTSNTGVLRGGHIPGAINLDWSDAVLPNGNFRTRAELDKLYADLNP CCCCHHCCCCCCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCC ADDTVVYCQVGDRAAHTWFVLKYLLGFNNVRNYDGSWAEWGNMVRMPIETGENTKNNVSV CCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCC S C >Mature Secondary Structure AAPFDPFPAFEEYAHPERIVSASWLSARLGSPGLKVVESNEDSLLYDIGHLPGAVRIDW CCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCEEEEEH AKDLNDPLTRDFIDGEAFAELMNRKGIARDDTVVVYGDKSNWWAAFTLWVFELFGHSDVR HHCCCCCHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEE LLNGGRDAWMAEERDTSYVVPEYPSANYPVVERVDENQRAFVAEVLGSLTQSGGMTLVDV EEECCCCCCEECCCCCCEECCCCCCCCCCHHEECCCCHHHHHHHHHHHHHHCCCCEEEEE RTPSEFSGLDEHGNPTSNTGVLRGGHIPGAINLDWSDAVLPNGNFRTRAELDKLYADLNP CCCCHHCCCCCCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCC ADDTVVYCQVGDRAAHTWFVLKYLLGFNNVRNYDGSWAEWGNMVRMPIETGENTKNNVSV CCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12948626; 8772169