| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is metY [H]
Identifier: 62389543
GI number: 62389543
Start: 667918
End: 669231
Strand: Reverse
Name: metY [H]
Synonym: cg0755
Alternate gene names: 62389543
Gene position: 669231-667918 (Counterclockwise)
Preceding gene: 62389550
Following gene: 62389542
Centisome position: 20.39
GC content: 57.91
Gene sequence:
>1314_bases ATGCCAAAGTACGACAATTCCAATGCTGACCAGTGGGGCTTTGAAACCCGCTCCATTCACGCAGGCCAGTCAGTAGACGC ACAGACCAGCGCACGAAACCTTCCGATCTACCAATCCACCGCTTTCGTGTTCGACTCCGCTGAGCACGCCAAGCAGCGTT TCGCACTTGAGGATCTAGGCCCTGTTTACTCCCGCCTCACCAACCCAACCGTTGAGGCTTTGGAAAACCGCATCGCTTCC CTCGAAGGTGGCGTCCACGCTGTAGCGTTCTCCTCCGGACAGGCCGCAACCACCAACGCCATTTTGAACCTGGCAGGAGC GGGCGACCACATCGTCACCTCCCCACGCCTCTACGGTGGCACCGAGACTCTATTCCTTATCACTCTTAACCGCCTGGGTA TCGATGTTTCCTTCGTGGAAAACCCCGACGACCCTGAGTCCTGGCAGGCAGCCGTTCAGCCAAACACCAAAGCATTCTTC GGCGAGACTTTCGCCAACCCACAGGCAGACGTCCTGGATATTCCTGCGGTGGCTGAAGTTGCGCACCGCAACAGCGTTCC ACTGATCATCGACAACACCATCGCTACCGCAGCGCTCGTGCGCCCGCTCGAGCTCGGCGCAGACGTTGTCGTCGCTTCCC TCACCAAGTTCTACACCGGCAACGGCTCCGGACTGGGCGGCGTGCTTATCGACGGCGGAAAGTTCGATTGGACTGTCGAA AAGGATGGAAAGCCAGTATTCCCCTACTTCGTCACTCCAGATGCTGCTTACCACGGATTGAAGTACGCAGACCTTGGTGC ACCAGCCTTCGGCCTCAAGGTTCGCGTTGGCCTTCTACGCGACACCGGCTCCACCCTCTCCGCATTCAACGCATGGGCTG CAGTCCAGGGCATCGACACCCTTTCCCTGCGCCTGGAGCGCCACAACGAAAACGCCATCAAGGTTGCAGAATTCCTCAAC AACCACGAGAAGGTGGAAAAGGTTAACTTCGCAGGCCTGAAGGATTCCCCTTGGTACGCAACCAAGGAAAAGCTTGGCCT GAAGTACACCGGCTCCGTTCTCACCTTCGAGATCAAGGGCGGCAAGGATGAGGCTTGGGCATTTATCGACGCCCTGAAGC TACACTCCAACCTTGCAAACATCGGCGATGTTCGCTCCCTCGTTGTTCACCCAGCAACCACCACCCATTCACAGTCCGAC GAAGCTGGCCTGGCACGCGCGGGCGTTACCCAGTCCACCGTCCGCCTGTCCGTTGGCATCGAGACCATTGATGATATCAT CGCTGACCTCGAAGGCGGCTTTGCTGCAATCTAG
Upstream 100 bases:
>100_bases AGAATAAATTTATACCACACAGTCTATTGCAATAGACCAAGCTGTTCAGTAGGGTGCATGGGAGAAGAATTTCCTAATAA AAACTCTTAAGGACCTCCAA
Downstream 100 bases:
>100_bases CTTTAAATAGACTCACCCCAGTGCTTAAAGCGCTGGGTTTTTCTTTTTCAGACTCGTGAGAATGCAAACTAGACTAGACA GAGCTGTCCATATACACTGG
Product: O-acetylhomoserine aminocarboxypropyltransferase
Products: L-methionine; acetate
Alternate protein names: OSH sulfhydrylase [H]
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MPKYDNSNADQWGFETRSIHAGQSVDAQTSARNLPIYQSTAFVFDSAEHAKQRFALEDLGPVYSRLTNPTVEALENRIAS LEGGVHAVAFSSGQAATTNAILNLAGAGDHIVTSPRLYGGTETLFLITLNRLGIDVSFVENPDDPESWQAAVQPNTKAFF GETFANPQADVLDIPAVAEVAHRNSVPLIIDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVE KDGKPVFPYFVTPDAAYHGLKYADLGAPAFGLKVRVGLLRDTGSTLSAFNAWAAVQGIDTLSLRLERHNENAIKVAEFLN NHEKVEKVNFAGLKDSPWYATKEKLGLKYTGSVLTFEIKGGKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSD EAGLARAGVTQSTVRLSVGIETIDDIIADLEGGFAAI
Sequences:
>Translated_437_residues MPKYDNSNADQWGFETRSIHAGQSVDAQTSARNLPIYQSTAFVFDSAEHAKQRFALEDLGPVYSRLTNPTVEALENRIAS LEGGVHAVAFSSGQAATTNAILNLAGAGDHIVTSPRLYGGTETLFLITLNRLGIDVSFVENPDDPESWQAAVQPNTKAFF GETFANPQADVLDIPAVAEVAHRNSVPLIIDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVE KDGKPVFPYFVTPDAAYHGLKYADLGAPAFGLKVRVGLLRDTGSTLSAFNAWAAVQGIDTLSLRLERHNENAIKVAEFLN NHEKVEKVNFAGLKDSPWYATKEKLGLKYTGSVLTFEIKGGKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSD EAGLARAGVTQSTVRLSVGIETIDDIIADLEGGFAAI >Mature_436_residues PKYDNSNADQWGFETRSIHAGQSVDAQTSARNLPIYQSTAFVFDSAEHAKQRFALEDLGPVYSRLTNPTVEALENRIASL EGGVHAVAFSSGQAATTNAILNLAGAGDHIVTSPRLYGGTETLFLITLNRLGIDVSFVENPDDPESWQAAVQPNTKAFFG ETFANPQADVLDIPAVAEVAHRNSVPLIIDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVEK DGKPVFPYFVTPDAAYHGLKYADLGAPAFGLKVRVGLLRDTGSTLSAFNAWAAVQGIDTLSLRLERHNENAIKVAEFLNN HEKVEKVNFAGLKDSPWYATKEKLGLKYTGSVLTFEIKGGKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDE AGLARAGVTQSTVRLSVGIETIDDIIADLEGGFAAI
Specific function: Converts O-succinylhomoserine into homocysteine [H]
COG id: COG2873
COG function: function code E; O-acetylhomoserine sulfhydrylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trans-sulfuration enzymes family [H]
Homologues:
Organism=Homo sapiens, GI21361334, Length=408, Percent_Identity=31.6176470588235, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI299473759, Length=408, Percent_Identity=27.6960784313726, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI25453487, Length=407, Percent_Identity=28.5012285012285, Blast_Score=130, Evalue=3e-30, Organism=Escherichia coli, GI1790375, Length=423, Percent_Identity=28.6052009456265, Blast_Score=151, Evalue=7e-38, Organism=Escherichia coli, GI1789383, Length=440, Percent_Identity=27.9545454545455, Blast_Score=139, Evalue=3e-34, Organism=Caenorhabditis elegans, GI71980708, Length=402, Percent_Identity=29.8507462686567, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17560056, Length=412, Percent_Identity=31.3106796116505, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17538055, Length=413, Percent_Identity=31.2348668280872, Blast_Score=176, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6323333, Length=438, Percent_Identity=42.2374429223744, Blast_Score=295, Evalue=9e-81, Organism=Saccharomyces cerevisiae, GI6319307, Length=431, Percent_Identity=33.1786542923434, Blast_Score=174, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6321254, Length=441, Percent_Identity=27.891156462585, Blast_Score=112, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6321170, Length=337, Percent_Identity=26.1127596439169, Blast_Score=107, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6321904, Length=411, Percent_Identity=24.8175182481752, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI19922554, Length=423, Percent_Identity=35.9338061465721, Blast_Score=216, Evalue=4e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000277 - InterPro: IPR006234 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01053 Cys_Met_Meta_PP [H]
EC number: 2.5.1.49
Molecular weight: Translated: 46753; Mature: 46622
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKYDNSNADQWGFETRSIHAGQSVDAQTSARNLPIYQSTAFVFDSAEHAKQRFALEDLG CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECEEEEECCHHHHHHHHHHHHHH PVYSRLTNPTVEALENRIASLEGGVHAVAFSSGQAATTNAILNLAGAGDHIVTSPRLYGG HHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCEECEEEEEECCCCCCEEECCEECCC TETLFLITLNRLGIDVSFVENPDDPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEV CCEEEEEEEEHHCEEEEECCCCCCHHHHHEECCCCCCEECCHHCCCCCCCEEECCHHHHH AHRNSVPLIIDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVE HHCCCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEEE KDGKPVFPYFVTPDAAYHGLKYADLGAPAFGLKVRVGLLRDTGSTLSAFNAWAAVQGIDT CCCCEECCEEECCCHHHCCCEEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCE LSLRLERHNENAIKVAEFLNNHEKVEKVNFAGLKDSPWYATKEKLGLKYTGSVLTFEIKG EEEEEEECCCCHHHHHHHHCCHHHHHHEEECCCCCCCCCCHHHHCCEEEECCEEEEEEEC GKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGVTQSTVRLSVGI CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHCCCCCEEEEEEECH ETIDDIIADLEGGFAAI HHHHHHHHHCCCCCCCC >Mature Secondary Structure PKYDNSNADQWGFETRSIHAGQSVDAQTSARNLPIYQSTAFVFDSAEHAKQRFALEDLG CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECEEEEECCHHHHHHHHHHHHHH PVYSRLTNPTVEALENRIASLEGGVHAVAFSSGQAATTNAILNLAGAGDHIVTSPRLYGG HHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCEECEEEEEECCCCCCEEECCEECCC TETLFLITLNRLGIDVSFVENPDDPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEV CCEEEEEEEEHHCEEEEECCCCCCHHHHHEECCCCCCEECCHHCCCCCCCEEECCHHHHH AHRNSVPLIIDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVE HHCCCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEEE KDGKPVFPYFVTPDAAYHGLKYADLGAPAFGLKVRVGLLRDTGSTLSAFNAWAAVQGIDT CCCCEECCEEECCCHHHCCCEEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCE LSLRLERHNENAIKVAEFLNNHEKVEKVNFAGLKDSPWYATKEKLGLKYTGSVLTFEIKG EEEEEEECCCCHHHHHHHHCCHHHHHHEEECCCCCCCCCCHHHHCCEEEECCEEEEEEEC GKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGVTQSTVRLSVGI CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHCCCCCEEEEEEECH ETIDDIIADLEGGFAAI HHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: O-acetyl-L-homoserine; methanethiol
Specific reaction: O-acetyl-L-homoserine + methanethiol = L-methionine + acetate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7704274; 10984043 [H]